RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Trmt44Q9D2Q2 713 aa12.18□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Mrps9Q9D7N3 390 aaKnown RBP12.18□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ptf1aQ9QX98 324 aa12.18□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Atp11cQ9QZW0 1129 aa12.18□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Gdf11Q9Z1W4 405 aa12.18□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Card9A2AIV8 536 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Zfp266E9Q2S7 604 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Sema6bO54951 886 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Syt2P46097 422 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 GckP52792 465 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 NcstnP57716 708 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Palb2Q3U0P1 1104 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Q8BGN9 141 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Zbtb8bQ8CII0 484 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Asb11Q9CQ31 323 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Rnf135Q9CWS1 417 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Hebp1Q9R257 190 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Cacna1sQ02789 1880 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ces1aE9PYP1 563 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ttc7bE9Q6P5 843 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 4933406M09RikG3XA12 479 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 EporP14753 507 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Stmn4P63042 189 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Q3UTZ3 580 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Fam81aQ3UXZ6 364 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Dzip1lQ499E4 774 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Atxn7Q8R4I1 867 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Grtp1Q9D3N8 359 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Speer3W4VSP1 261 aa12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Arfgef1G3X9K3 1846 aaKnown RBP12.17□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Unc5cO08747 931 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Pih1d3Q3KNI6 218 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Rgl1Q60695 768 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 JrkQ60976 557 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Sh3rf1Q69ZI1 892 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Rbm12b1Q80YR9 836 aaKnown RBP12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Fsd1lQ8BYN5 507 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Lmo3Q8BZL8 145 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Reep2Q8VCD6 254 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Q9CR55 154 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Pgm1Q9D0F9 562 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Iqcj-Schip1A0A088MLT8 559 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ace3D0G895 737 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ccdc144bE9PVZ3 520 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Esr2O08537 530 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Schip1P0DPB4 484 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Cbx3P23198 183 aaKnown RBP12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Fmr1P35922 614 aaKnown RBP12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Fgfr4Q03142 799 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Col6a1Q04857 1025 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Pyroxd1Q3TMV7 498 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Xxylt1Q3U4G3 392 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Lrrc43Q3V0L5 667 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Vmn1r209Q5NC97 312 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Grm6Q5NCH9 871 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Grid1Q61627 1009 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ptger2Q62053 362 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Spata24Q6P926 205 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 P2ry10Q8BFU7 328 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Cfap36Q8C6E0 343 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Dcaf8Q8N7N5 591 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 DolkQ8R2Y3 534 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Pcdhb5Q91XZ5 792 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ptdss1Q99LH2 473 aaKnown RBP12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Znf287Q9EQB9 759 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Lbhd1A0A087WPA0 259 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Lonrf2B2RT44 518 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ildr2B5TVM2 661 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Olfr552E9Q545 317 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Banf1O54962 89 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Trim43bP86448 445 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Mphosph8Q3TYA6 858 aaKnown RBP12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ppp1r13lQ5I1X5 824 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ppp2r5eQ61151 467 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Plk4Q64702 925 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Cdc14aQ6GQT0 603 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 MogsQ80UM7 834 aaKnown RBP12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Zfp438Q8BFX2 798 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Psd4Q8BLR5 1005 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Heatr3Q8BQM4 679 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Lrrc8cQ8R502 803 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Adam22Q9R1V6 904 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Eya4Q9Z191 616 aa12.16□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Zfp212G3X8R7 492 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Gm3182K7N6T8 263 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 HpdP49429 393 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Tbc1d10aP58802 500 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Rnf113a2Q14B01 337 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Foxd4Q60688 444 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Zcchc2Q69ZB8 1166 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ntrk3Q6VNS1 825 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Lin9Q8C735 542 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ago4Q8CJF8 861 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Mill1Q8HWE7 395 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Tekt2Q922G7 430 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Spdl1Q923A2 608 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Thumpd2Q9CZB3 528 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Batf3Q9D275 118 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Rnf225Q9D7D1 332 aa12.15□□□□□ -0.46
Prpf40b-208ENSMUST00000136980 Ccdc70Q9D9B0 223 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms