RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Sdad1Q80UZ2 687 aaKnown RBP9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gatad2bQ8VHR5 594 aaKnown RBP9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Cab39lQ9DB16 337 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pold3Q9EQ28 462 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Dmap1Q9JI44 468 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Arhgap27A2AB59 869 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Idh1O88844 414 aaKnown RBP9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Nudt19P11930 357 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Msx3P70354 204 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Faf2Q3TDN2 445 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Slc16a10Q3U9N9 512 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Slc38a10Q5I012 1090 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Atp13a3Q5XF89 1219 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Mtss1lQ6P9S0 715 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Nemp1Q6ZQE4 437 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ccdc90bQ8C3X2 256 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ccdc80Q8R2G6 949 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Olfr1047Q8VGS0 319 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Dhrs4Q99LB2 279 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Cntn3Q07409 1028 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Phf8Q80TJ7 1023 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Otop3Q80UF9 577 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Spata33Q8C624 132 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 HinfpQ8K1K9 503 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Hexim1Q8R409 356 aaKnown RBP9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ndufs2Q91WD5 463 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Txndc9Q9CQ79 226 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ccdc77Q9CZH8 489 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Stx4P70452 298 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 CbfbQ08024 187 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Abi3bpQ59IW6 1179 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 AdalQ80SY6 360 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Stk32aQ8BGW6 398 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Calhm6Q8C9E8 313 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Usp45Q8K387 813 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Rev1Q920Q2 1249 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Cdca7lQ922M5 438 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Kcnn1Q9EQR3 537 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm2956E9PVJ0 216 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm8108K7N734 216 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm6401L7N2C0 213 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm3488M0QW81 238 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tnnc2P20801 160 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Hsd3b1P24815 373 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Qsox2Q3TMX7 692 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tbc1d1Q60949 1255 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Sept9Q80UG5 583 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pgrmc2Q80UU9 217 aaKnown RBP9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gcfc2Q8BKT3 769 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Yod1Q8CB27 343 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ccdc87Q8CDL9 855 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pom121Q8K3Z9 1200 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Il31raQ8K5B1 716 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Calml4Q91WQ9 153 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 NsmfQ99NF2 532 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Mapk11Q9WUI1 364 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fhad1A6PWD2 1420 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Auts2A0A087WPF7 1261 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 MipepA6H611 711 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gbp11A9YVJ5 442 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Nek2O35942 443 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ddx6P54823 483 aaKnown RBP9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pdrg1P59048 133 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Sash1P59808 1230 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Crnkl1P63154 690 aaKnown RBP9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Capza3P70190 299 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Stim1P70302 685 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Sdr16c6Q05A13 316 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gtpbp2Q3UJK4 602 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fam83gQ5SWY7 812 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Rabl6Q5U3K5 725 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 BcrQ6PAJ1 1270 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Mterf1aQ8CHZ9 379 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pls3Q99K51 630 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pmf1Q9CPV5 202 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Dlgap1Q9D415 992 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Trp53inp1Q9QXE4 239 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 CntlnA2AM05 1397 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm5878E9PUB3 99 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm3636E9Q5P1 227 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Prom1O54990 867 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Csf2P01587 141 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Atxn10P28658 475 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Trappc9Q3U0M1 1148 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Zswim9Q6DI92 447 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 RragbQ6NTA4 374 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Sephs1Q8BH69 392 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pih1d2Q8CHR9 315 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 BrdtQ91Y44 956 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 NapgQ9CWZ7 312 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ptk2bQ9QVP9 1009 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ccnyl1D3YUJ3 367 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 SlxD3Z347 212 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ifi206G3UZV2 921 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Cd151O35566 253 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ephb4P54761 987 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Syne3Q4FZC9 975 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Lca5lQ8C0X0 741 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gfm2Q8R2Q4 779 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gtf2e2Q9D902 292 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms