RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 SufuQ9Z0P7 484 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ctnnal1O88327 731 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pih1d3Q3KNI6 218 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zswim6Q80TB7 1207 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Slc17a8Q8BFU8 601 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Vgll2Q8BGW8 322 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Wasf2Q8BH43 497 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ppm1kQ8BXN7 372 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pnma1Q8C1C8 353 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Myef2Q8C854 591 aaKnown RBP10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Fbxl13Q8CDU4 790 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Snf8Q9CZ28 258 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Hsf2bpQ9D4G2 338 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 CsadQ9DBE0 493 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cyth1Q9QX11 398 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cntnap5cQ0V8T7 1305 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 XdhQ00519 1335 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gm21973F6WEZ7 68 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Usp35M0QWN7 1009 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Nptx2O70340 429 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 NsfP46460 744 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 UrosP51163 265 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cops2P61202 443 aaKnown RBP10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gucy2fQ5SDA5 1108 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cyp3a11Q64459 504 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Q99KU6 348 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gm13084A2A8N0 494 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Mmrn2A6H6E2 943 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Prdm15E9Q8T2 1174 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gm7995L7N2E4 160 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Psmc4P54775 418 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cnga4Q3UW12 575 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Fam81aQ3UXZ6 364 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Fam92bQ3V2J0 292 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Prr18Q6PAN7 307 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zfp341Q6PGC9 846 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 RbakQ8BQC8 711 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Tmem161bQ8C2L6 487 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Atp5c1Q91VR2 298 aaKnown RBP10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Htra2Q9JIY5 458 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gyg1Q9R062 333 aa10.42□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Kmt2eQ3UG20 1868 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Scgb2b21A0A087WQA9 112 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Glt1d1A4FUP9 346 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Lonrf2B2RT44 518 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gm5795E9PZN8 263 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Trove2O08848 538 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pde6bP23440 856 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ces1cP23953 554 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ankmy2Q3TPE9 440 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ccdc117Q6PB51 277 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Vat1lQ80TB8 417 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 MyripQ8K3I4 856 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zbtb44Q8R0A2 453 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Bag2Q91YN9 210 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Tjp3Q9QXY1 905 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Frmpd3A0A140LIW3 1774 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Slc27a2O35488 620 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pde8aO88502 823 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 FaxcQ3UMF9 409 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Tcf4Q60722 670 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Phc1Q64028 1012 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pgrmc2Q80UU9 217 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Dus1lQ8C2P3 475 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 ItpkaQ8R071 459 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Nop56Q9D6Z1 580 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Wdr83Q9DAJ4 315 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Olr1Q9EQ09 363 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 H2-OaQ9QWV1 250 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Spata31d1dE9Q5W2 1247 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Banf1O54962 89 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Axin2O88566 840 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Irf8P23611 424 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Trim43bP86448 445 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Atp13a5Q3TYU2 1216 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gbp4Q61107 620 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Znf618Q80YY7 953 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Orai2Q8BH10 250 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cd300ldQ8VCH2 221 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Nxf1Q99JX7 618 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cuedc2Q9CXX9 284 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 CtsfQ9R013 462 aa10.41□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Taf1Q80UV9 1891 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Slfn8B1ARD8 910 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Speer2E9Q9U2 264 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 CaluO35887 315 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 P01734 135 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Rps6P62754 249 aaKnown RBP10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Igsf9Q05BQ1 1179 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 AcrbpQ3V140 540 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Stxbp2Q64324 593 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zcwpw1Q6IR42 630 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cyfip1Q7TMB8 1253 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Rpa1Q8VEE4 623 aaKnown RBP10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Olfr1499Q8VG65 314 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Kcnq4Q9JK97 696 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Uts2Q9QZQ3 123 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Sucla2Q9Z2I9 463 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Myo5aQ99104 1853 aaKnown RBP10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gm15448F6PZL4 682 aa10.4□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms