RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Q8C5C9 218 aa14.63□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ino80Q6ZPV2 1559 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 MypnQ5DTJ9 1315 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Pabpc1lA2A5N3 607 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Polr1bP70700 1135 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Smad5P97454 465 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Eps8Q08509 821 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Krt35Q497I4 455 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Vmp1Q99KU0 406 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Abcc3B2RX12 1523 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Skint6A7XUZ6 1240 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm8994E9PV04 411 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm8267E9Q207 261 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Msh2P43247 935 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Pid1Q3UBG2 217 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Igf2bp3Q9CPN8 579 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Kif20bQ80WE4 1774 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Myh11O08638 1972 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Osbpl9A2A8Z1 736 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm3264L7N2C5 238 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ctnnal1O88327 731 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Sv2cQ69ZS6 727 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Q8BWQ6 963 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rnf219Q8K2Y0 722 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Znf445Q8R2V3 986 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Guca1bQ8VBV8 201 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Pabpc6Q9D4E6 643 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Clca1Q9D7Z6 913 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 QkiQ9QYS9 341 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Stau1Q9Z108 487 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ctnnd2O35927 1247 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Atf5O70191 283 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 CyldQ80TQ2 952 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Stx11Q9D3G5 287 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Disp1Q3TDN0 1521 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cfap52Q5F201 620 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 PigsQ6PD26 555 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tmem179Q8BHH9 233 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Erich5Q8K0S2 362 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Castor1Q9CWQ8 331 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 CenpsQ9D084 142 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rcn1Q05186 325 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Mcf2lQ64096 1149 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ttc23Q8CHY7 488 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Retreg1dQ8VE91 480 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Hic2Q9JLZ6 619 aaKnown RBP14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Magi2Q9WVQ1 1275 aa14.62□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm5483B2RV77 97 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Atn1O35126 1175 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Dnajb6O54946 365 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Sema3eP70275 775 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Atp1b3P97370 278 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Bbs1Q3V3N7 593 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 XpaQ64267 272 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Prrg3Q6PAQ9 231 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Smarcal1Q8BJL0 910 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Arhgef7Q9ES28 862 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Slc9a5B2RXE2 898 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cd22P35329 862 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ip6k2Q80V72 448 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Mtif2Q91YJ5 727 aaKnown RBP14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rps6kb2Q9Z1M4 485 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 AatkQ80YE4 1365 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Shcbp1lQ3TTP0 639 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Slitrk2Q810C0 846 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gtf3c6Q9D8P7 227 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Lrrc46Q9DAP0 323 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Atp5oQ9DB20 213 aaKnown RBP14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ubxn8Q9QZ49 277 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 KhnynQ80U38 671 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 PgdQ9DCD0 483 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Mpp2Q9WV34 552 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 A0A1Y7VP24 259 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Kcnh2O35219 1162 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Spata32Q8C5V0 334 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Dcun1d1Q9QZ73 259 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ifi207E9Q3L4 978 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Nod1Q8BHB0 953 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Map3k21Q8VDG6 1002 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Mis18aQ9CZJ6 204 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Twf2Q9Z0P5 349 aaKnown RBP14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Arih2Q9Z1K6 492 aa14.61□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cyp7b1Q60991 507 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gga3Q8BMI3 718 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 FopnlQ9CZS3 174 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Znf638Q61464 1960 aaKnown RBP14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Adssl1P28650 457 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Sept1P42209 366 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 MydgfQ9CPT4 166 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Fam84aQ9D650 292 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Poc5Q9DBS8 558 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Zc3h7bF8VPP8 982 aaKnown RBP14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Hcn2O88703 863 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Slc1a1P51906 523 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 ClmnQ8C5W0 1052 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ppp1r16bQ8VHQ3 568 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Idh3bQ91VA7 384 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Serpinb9bQ9DAV6 377 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Anxa9Q9JHQ0 345 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Acnat1A2AKK5 416 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms