RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ankfy1Q810B6 1169 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Vps52Q8C754 723 aaKnown RBP17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Olfr1502Q8VG66 316 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Spats2lQ91WJ7 558 aaKnown RBP17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Sbf2E9PXF8 1872 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Cdh16O88338 830 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Phka1P18826 1241 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Pdha1P35486 390 aaKnown RBP17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Cdc25cP48967 447 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Wdr70Q3TWF6 657 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Scnn1aQ61180 699 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Lrrcc1Q69ZB0 1026 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Pofut2Q8VHI3 429 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Ttc1Q91Z38 292 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Rnf103Q9R1W3 683 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Trove2O08848 538 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 AladP10518 330 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Mcpt4P21812 246 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Cav1P49817 178 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Eef1dP57776 281 aaKnown RBP17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Plk1Q07832 603 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Acot6Q32Q92 419 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Nemp2Q8CB65 421 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Snx30Q8CE50 437 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Ppp1r11Q8K1L5 131 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Tom1l1Q923U0 474 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Slc5a5Q99PN0 618 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 TtpalQ9D3D0 343 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Tlr5Q9JLF7 859 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Cyth1Q9QX11 398 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 BcamQ9R069 622 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Smchd1Q6P5D8 2007 aaKnown RBP17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 JrklB2RRL2 523 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Slc9b2Q5BKR2 547 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Itm2aQ61500 263 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Kbtbd3Q8BHI4 607 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Dupd1Q8BK84 215 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Heatr3Q8BQM4 679 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Trerf1Q8BXJ2 1205 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Dus1lQ8C2P3 475 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Bicdl1A0JNT9 577 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Znf804aA2AKY4 1200 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Marcksl1P28667 200 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Nt5c2Q3V1L4 560 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Btbd10Q80X66 475 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Arl8bQ9CQW2 186 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 AenQ9CZI9 336 aaKnown RBP17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Slc8a3S4R2P9 928 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Col11a2Q64739 1736 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Icam1P13597 537 aaKnown RBP17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Gsta3P30115 221 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Eef2P58252 858 aaKnown RBP17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 B3gnt3Q5JCS9 372 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Pcsk7Q61139 770 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 ScapQ6GQT6 1276 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Krt77Q6IFZ6 572 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 GlmnQ8BZM1 596 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Depdc1aQ8CIG0 804 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Hkdc1Q91W97 915 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Pde6cQ91ZQ1 861 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 MtrexQ9CZU3 1040 aaKnown RBP17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Trim42Q9D2H5 723 aa17.92■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Rpl21O09167 160 aaKnown RBP17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Ifnar2O35664 513 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Ezh1P70351 747 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Mmrn2A6H6E2 943 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Unc13dB2RUP2 1085 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Kif6E9PX57 802 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Atp1b3P97370 278 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Klra7Q60654 280 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Olfml3Q8BK62 406 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Slc14a2Q8R4T9 930 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Reep2Q8VCD6 254 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 DldO08749 509 aaKnown RBP17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 AoahO35298 574 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Kctd1Q5M956 257 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Tfap2bQ61313 459 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Creb3l2Q8BH52 521 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Fam192aQ91WE2 254 aa17.91■□□□□ 0.46
Ctcf-201ENSMUST00000005841 PatjQ63ZW7 1834 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Gm13084A2A8N0 494 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Idh1O88844 414 aaKnown RBP17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Fdx1P46656 188 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Haus6Q6NV99 933 aaKnown RBP17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Cyfip1Q7TMB8 1253 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Sec24bQ80ZX0 1251 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Oxnad1Q8VE38 311 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Gm20509G3UZF1 325 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Atp9aO70228 1047 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 IvlP48997 467 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Slc10a4Q3UEZ8 437 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Nt5dc3Q3UHB1 546 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Pabpn1lQ5XFR0 273 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Dpp8Q80YA7 892 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Trmt44Q9D2Q2 713 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Serpina9Q9D7D2 418 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Actl7bQ9QY83 418 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Gm21962L7N280 338 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 AlbP07724 608 aa17.9■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Hoxc13P50207 328 aa17.9■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms