RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 FMP49A0A023PZB3 126 aa-0.77□□□□□ -2.53
snR48snR48 YAL064W-BO13512 126 aa-0.77□□□□□ -2.53
snR48snR48 RNR2P09938 399 aaKnown RBP-0.77□□□□□ -2.53
snR48snR48 DAD2P36162 133 aa-0.77□□□□□ -2.53
snR48snR48 ADH5P38113 351 aaKnown RBP-0.77□□□□□ -2.53
snR48snR48 HEK2P38199 381 aaKnown RBP RIP-Chip data-0.77□□□□□ -2.53not detected
snR48snR48 YHL049CP38722 271 aa-0.77□□□□□ -2.53
snR48snR48 YPL077CQ02831 240 aa-0.77□□□□□ -2.53
snR48snR48 SER33P40510 469 aa-0.78□□□□□ -2.53
snR48snR48 TIR3P40552 269 aa-0.78□□□□□ -2.53
snR48snR48 RPL33BP41056 107 aaKnown RBP-0.78□□□□□ -2.53
snR48snR48 IBA57P47158 497 aa-0.78□□□□□ -2.53
snR48snR48 YGL185CP53100 379 aa-0.78□□□□□ -2.53
snR48snR48 ARR2Q06597 130 aa-0.78□□□□□ -2.53
snR48snR48 YBL008W-AQ3E821 79 aa-0.78□□□□□ -2.53
snR48snR48 AI5_BETAQ9ZZX0 354 aa-0.78□□□□□ -2.53
snR48snR48 PEX3P28795 441 aa-0.79□□□□□ -2.54
snR48snR48 UGX2P32772 223 aa-0.79□□□□□ -2.54
snR48snR48 MSA2P36157 363 aa-0.79□□□□□ -2.54
snR48snR48 APE4P38821 490 aa-0.79□□□□□ -2.54
snR48snR48 TDA11P38854 504 aa-0.79□□□□□ -2.54
snR48snR48 YNL217WP40152 326 aa-0.79□□□□□ -2.54
snR48snR48 CUE3P53137 624 aaKnown RBP-0.79□□□□□ -2.54
snR48snR48 SEC10Q06245 871 aa-0.79□□□□□ -2.54
snR48snR48 ANT1Q06497 328 aa-0.79□□□□□ -2.54
snR48snR48 HEM25Q07534 307 aa-0.79□□□□□ -2.54
snR48snR48 YDL180WQ12301 547 aa-0.79□□□□□ -2.54
snR48snR48 EMP46Q12396 444 aa-0.79□□□□□ -2.54
snR48snR48 ILV1P00927 576 aaKnown RBP-0.8□□□□□ -2.54
snR48snR48 GAL3P13045 520 aa-0.8□□□□□ -2.54
snR48snR48 TAL1P15019 335 aaKnown RBP-0.8□□□□□ -2.54
snR48snR48 GAA1P39012 614 aa-0.8□□□□□ -2.54
snR48snR48 COX16P47081 118 aa-0.8□□□□□ -2.54
snR48snR48 SAY1P53324 424 aa-0.8□□□□□ -2.54
snR48snR48 EOS1P53938 366 aa-0.8□□□□□ -2.54
snR48snR48 DIG2Q03373 323 aaKnown RBP-0.8□□□□□ -2.54
snR48snR48 YOS9Q99220 542 aa-0.8□□□□□ -2.54
snR48snR48 SIR4P11978 1358 aa-0.81□□□□□ -2.54
snR48snR48 EBP2P36049 427 aaKnown RBP-0.81□□□□□ -2.54
snR48snR48 GTO1P48239 356 aa-0.81□□□□□ -2.54
snR48snR48 BOL2P53082 120 aa-0.81□□□□□ -2.54
snR48snR48 FRE6Q12473 712 aa-0.81□□□□□ -2.54
snR48snR48 SWI1P09547 1314 aa-0.82□□□□□ -2.54
snR48snR48 YFL065CP43539 102 aa-0.82□□□□□ -2.54
snR48snR48 DBP9Q06218 594 aaKnown RBP-0.82□□□□□ -2.54
snR48snR48 RRS1Q08746 203 aaKnown RBP-0.82□□□□□ -2.54
snR48snR48 SIA1Q12212 622 aa-0.82□□□□□ -2.54
snR48snR48 YLR462WO13556 202 aa-0.83□□□□□ -2.54
snR48snR48 GRX2P17695 143 aaKnown RBP-0.83□□□□□ -2.54
snR48snR48 SWC5P38326 303 aa-0.83□□□□□ -2.54
snR48snR48 LRP1P38801 184 aaKnown RBP-0.83□□□□□ -2.54
snR48snR48 LIN1P38852 340 aaPredicted RBP-0.83□□□□□ -2.54
snR48snR48 YEL075CP39972 122 aa-0.83□□□□□ -2.54
snR48snR48 EDC3P39998 551 aaKnown RBP-0.83□□□□□ -2.54
snR48snR48 YEA4P40004 342 aa-0.83□□□□□ -2.54
snR48snR48 RCE1Q03530 315 aa-0.83□□□□□ -2.54
snR48snR48 ATG39Q06159 398 aa-0.83□□□□□ -2.54
snR48snR48 SFH1Q06168 426 aa-0.83□□□□□ -2.54
snR48snR48 GPN3Q06543 272 aa-0.83□□□□□ -2.54
snR48snR48 PER33Q12144 273 aa-0.83□□□□□ -2.54
snR48snR48 PAA1Q12447 191 aaKnown RBP-0.83□□□□□ -2.54
snR48snR48 ATP6P00854 259 aa-0.84□□□□□ -2.54
snR48snR48 SSA3P09435 649 aaKnown RBP-0.84□□□□□ -2.54
snR48snR48 ERG24P32462 438 aaKnown RBP-0.84□□□□□ -2.54
snR48snR48 SIP3P38717 1229 aa-0.84□□□□□ -2.54
snR48snR48 RRF1P38771 230 aa-0.84□□□□□ -2.54
snR48snR48 YER189WP40104 122 aa-0.84□□□□□ -2.54
snR48snR48 FIS1P40515 155 aa-0.84□□□□□ -2.54
snR48snR48 ERJ5P43613 295 aaPredicted RBP-0.84□□□□□ -2.54
snR48snR48 ARO8P53090 500 aaKnown RBP-0.84□□□□□ -2.54
snR48snR48 YGL034CP53186 121 aa-0.84□□□□□ -2.54
snR48snR48 CAR2P07991 424 aaKnown RBP-0.85□□□□□ -2.55
snR48snR48 RPL27BP0C2H7 136 aaKnown RBP-0.85□□□□□ -2.55
snR48snR48 RPL5P26321 297 aaKnown RBP-0.85□□□□□ -2.55
snR48snR48 FZO1P38297 855 aa-0.85□□□□□ -2.55
snR48snR48 GPI8P49018 411 aa-0.85□□□□□ -2.55
snR48snR48 NBP35P52920 328 aa-0.85□□□□□ -2.55
snR48snR48 AIF1P52923 378 aa-0.85□□□□□ -2.55
snR48snR48 YGL159WP53110 370 aa-0.85□□□□□ -2.55
snR48snR48 CPD1P53314 239 aa-0.85□□□□□ -2.55
snR48snR48 YNL050CP53952 270 aa-0.85□□□□□ -2.55
snR48snR48 POT1P27796 417 aaKnown RBP RIP-Chip data-0.86□□□□□ -2.55not detected
snR48snR48 MNN9P39107 395 aaKnown RBP-0.86□□□□□ -2.55
snR48snR48 AIM20P40451 204 aa-0.86□□□□□ -2.55
snR48snR48 AGP3P43548 558 aa-0.86□□□□□ -2.55
snR48snR48 FAR8Q05040 523 aa-0.86□□□□□ -2.55
snR48snR48 PML1Q07930 204 aaPredicted RBP-0.86□□□□□ -2.55
snR48snR48 TPO4Q12256 659 aa-0.86□□□□□ -2.55
snR48snR48 SKS1Q12505 502 aa-0.86□□□□□ -2.55
snR48snR48 MEI4P29467 408 aa-0.87□□□□□ -2.55
snR48snR48 LAS1P36146 502 aaPredicted RBP-0.87□□□□□ -2.55
snR48snR48 END3P39013 349 aa-0.87□□□□□ -2.55
snR48snR48 YRB2P40517 327 aa-0.87□□□□□ -2.55
snR48snR48 YAE1P47118 141 aaPredicted RBP-0.87□□□□□ -2.55
snR48snR48 GTR2P53290 341 aa-0.87□□□□□ -2.55
snR48snR48 SWS2P53937 143 aa-0.87□□□□□ -2.55
snR48snR48 VBA1Q04301 562 aa-0.87□□□□□ -2.55
snR48snR48 YPL257WQ08974 193 aa-0.87□□□□□ -2.55
snR48snR48 TFC1P32367 649 aa-0.88□□□□□ -2.55
snR48snR48 FLX1P40464 311 aa-0.88□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 83.6 ms