RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C AGA2P32781 87 aa2.51□□□□□ -2.01
WHI3YNL197C DRE2P36152 348 aa2.51□□□□□ -2.01
WHI3YNL197C SUR2P38992 349 aa2.51□□□□□ -2.01
WHI3YNL197C ERG28P40030 148 aa2.51□□□□□ -2.01
WHI3YNL197C YJL028WP47062 111 aa2.51□□□□□ -2.01
WHI3YNL197C TOS8P53147 276 aa2.51□□□□□ -2.01
WHI3YNL197C YPR147CQ06522 304 aaKnown RBP2.51□□□□□ -2.01
WHI3YNL197C YOR186WQ08560 144 aa2.51□□□□□ -2.01
WHI3YNL197C YPS3Q12303 508 aa2.51□□□□□ -2.01
WHI3YNL197C SMT3Q12306 101 aaKnown RBP2.51□□□□□ -2.01
WHI3YNL197C CDC33P07260 213 aaKnown RBP2.5□□□□□ -2.01
WHI3YNL197C YNL046WP53956 172 aa2.5□□□□□ -2.01
WHI3YNL197C RHO3Q00245 231 aaKnown RBP2.5□□□□□ -2.01
WHI3YNL197C YMR114CQ04471 368 aaKnown RBP2.5□□□□□ -2.01
WHI3YNL197C FCF1Q05498 189 aaPredicted RBP2.5□□□□□ -2.01
WHI3YNL197C RRP40Q08285 240 aaKnown RBP2.5□□□□□ -2.01
WHI3YNL197C SYC1Q08553 188 aaPredicted RBP2.5□□□□□ -2.01
WHI3YNL197C YPR011CQ12251 326 aa2.5□□□□□ -2.01
WHI3YNL197C YLR126CQ12288 251 aa2.5□□□□□ -2.01
WHI3YNL197C NHP6BP11633 99 aaKnown RBP2.5□□□□□ -2.01
WHI3YNL197C SNA3P14359 133 aa2.5□□□□□ -2.01
WHI3YNL197C COQ1P18900 473 aa2.5□□□□□ -2.01
WHI3YNL197C GDH2P33327 1092 aaKnown RBP2.5□□□□□ -2.01
WHI3YNL197C SGE1P33335 543 aa2.5□□□□□ -2.01
WHI3YNL197C SPL2P38839 148 aa2.5□□□□□ -2.01
WHI3YNL197C IES3Q12345 250 aa2.5□□□□□ -2.01
WHI3YNL197C NCB2Q92317 146 aa2.5□□□□□ -2.01
WHI3YNL197C RPS23AP0CX29 145 aaKnown RBP2.49□□□□□ -2.01
WHI3YNL197C RPS23BP0CX30 145 aa2.49□□□□□ -2.01
WHI3YNL197C ERD2P18414 219 aa2.49□□□□□ -2.01
WHI3YNL197C CDC10P25342 322 aaKnown RBP2.49□□□□□ -2.01
WHI3YNL197C PRP18P33411 251 aaPredicted RBP2.49□□□□□ -2.01
WHI3YNL197C SIP3P38717 1229 aa2.49□□□□□ -2.01
WHI3YNL197C YHR127WP38833 243 aaKnown RBP2.49□□□□□ -2.01
WHI3YNL197C YHB1P39676 399 aaKnown RBP2.49□□□□□ -2.01
WHI3YNL197C YRB1P41920 201 aaKnown RBP2.49□□□□□ -2.01
WHI3YNL197C TRM9P49957 279 aa2.49□□□□□ -2.01
WHI3YNL197C CWC23P52868 283 aaPredicted RBP2.49□□□□□ -2.01
WHI3YNL197C NIF3P53081 288 aa2.49□□□□□ -2.01
WHI3YNL197C MSA1Q08471 629 aa2.49□□□□□ -2.01
WHI3YNL197C AGC1Q12482 902 aa2.49□□□□□ -2.01
WHI3YNL197C YBL008W-AQ3E821 79 aa2.49□□□□□ -2.01
WHI3YNL197C SPT3P06844 337 aa2.49□□□□□ -2.01
WHI3YNL197C PPH21P23594 369 aa2.49□□□□□ -2.01
WHI3YNL197C TAF14P35189 244 aa2.49□□□□□ -2.01
WHI3YNL197C CBT1P36038 271 aaPredicted RBP2.49□□□□□ -2.01
WHI3YNL197C MCM22P47167 239 aa2.49□□□□□ -2.01
WHI3YNL197C MDM34P53083 459 aa2.49□□□□□ -2.01
WHI3YNL197C YPR063CQ12160 140 aa2.49□□□□□ -2.01
WHI3YNL197C EMP46Q12396 444 aa2.49□□□□□ -2.01
WHI3YNL197C BCY1P07278 416 aaKnown RBP2.48□□□□□ -2.01
WHI3YNL197C CUE1P38428 203 aa2.48□□□□□ -2.01
WHI3YNL197C TEM1P38987 245 aa2.48□□□□□ -2.01
WHI3YNL197C RAD17P48581 401 aa2.48□□□□□ -2.01
WHI3YNL197C MRPS17Q03246 237 aaPredicted RBP2.48□□□□□ -2.01
WHI3YNL197C YDR124WQ04608 324 aa2.48□□□□□ -2.01
WHI3YNL197C CDC123Q05791 360 aa2.48□□□□□ -2.01
WHI3YNL197C IES4Q08561 116 aa2.48□□□□□ -2.01
WHI3YNL197C SWI1P09547 1314 aa2.48□□□□□ -2.01
WHI3YNL197C FAB1P34756 2278 aa2.47□□□□□ -2.01
WHI3YNL197C YDR157WA0A023PZE8 133 aa2.47□□□□□ -2.01
WHI3YNL197C YHR139C-AO13536 103 aa2.47□□□□□ -2.01
WHI3YNL197C YBR121C-AP0C5L4 52 aa2.47□□□□□ -2.01
WHI3YNL197C BMH1P29311 267 aaKnown RBP2.47□□□□□ -2.01
WHI3YNL197C SRY1P36007 326 aa2.47□□□□□ -2.01
WHI3YNL197C COX15P40086 486 aa2.47□□□□□ -2.01
WHI3YNL197C YNL194CP40169 301 aa2.47□□□□□ -2.01
WHI3YNL197C MIC26P50087 233 aa2.47□□□□□ -2.01
WHI3YNL197C ISD11Q6Q560 94 aa2.47□□□□□ -2.01
WHI3YNL197C SEC22P22214 214 aa2.47□□□□□ -2.01
WHI3YNL197C SFC1P33303 322 aa2.47□□□□□ -2.01
WHI3YNL197C TKL2P33315 681 aa2.47□□□□□ -2.01
WHI3YNL197C ECO1P43605 281 aa2.47□□□□□ -2.01
WHI3YNL197C MIG2P53035 382 aa2.47□□□□□ -2.01
WHI3YNL197C ALG13P53178 202 aa2.47□□□□□ -2.01
WHI3YNL197C RSM27P53305 110 aa2.47□□□□□ -2.01
WHI3YNL197C ALG9P53868 555 aaKnown RBP2.47□□□□□ -2.01
WHI3YNL197C NUP157P40064 1391 aaKnown RBP2.46□□□□□ -2.02
WHI3YNL197C HIS3P06633 220 aa2.46□□□□□ -2.02
WHI3YNL197C STE18P18852 110 aa2.46□□□□□ -2.02
WHI3YNL197C MRPL39P36533 70 aa2.46□□□□□ -2.02
WHI3YNL197C YER084WP40057 128 aa2.46□□□□□ -2.02
WHI3YNL197C YIL059CP40520 121 aa2.46□□□□□ -2.02
WHI3YNL197C HAM1P47119 197 aaKnown RBP2.46□□□□□ -2.02
WHI3YNL197C MGA1P53050 456 aa2.46□□□□□ -2.02
WHI3YNL197C GOT1Q03554 138 aa2.46□□□□□ -2.02
WHI3YNL197C BNA7Q04066 261 aa2.46□□□□□ -2.02
WHI3YNL197C YPL150WQ12152 901 aa2.46□□□□□ -2.02
WHI3YNL197C TPO4Q12256 659 aa2.46□□□□□ -2.02
WHI3YNL197C SIR4P11978 1358 aa2.45□□□□□ -2.02
WHI3YNL197C PRX1P34227 261 aaKnown RBP2.45□□□□□ -2.02
WHI3YNL197C AST1P35183 429 aa2.45□□□□□ -2.02
WHI3YNL197C ECM14P38836 430 aa2.45□□□□□ -2.02
WHI3YNL197C PFS2P42841 465 aaKnown RBP2.45□□□□□ -2.02
WHI3YNL197C CUS2P53830 285 aaPredicted RBP2.45□□□□□ -2.02
WHI3YNL197C DCN1Q12395 269 aa2.45□□□□□ -2.02
WHI3YNL197C SGA1P08019 549 aa2.45□□□□□ -2.02
WHI3YNL197C PRE6P40303 254 aaKnown RBP2.45□□□□□ -2.02
WHI3YNL197C YIR035CP40579 254 aa2.45□□□□□ -2.02
WHI3YNL197C NSA1P53136 463 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms