RNA–Protein interactions for RNA: YNL037C

IDH1, Transcript of Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, yeast

Gene IDH1, Length 1,083 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IDH1	YNL037C	YLR358C	O13565	187 aa		10.18	□□□□□ -0.78
IDH1	YNL037C	PHO4	P07270	312 aa	Known RBP	10.18	□□□□□ -0.78
IDH1	YNL037C	MSI1	P13712	422 aa		10.18	□□□□□ -0.78
IDH1	YNL037C	MNS1	P32906	549 aa		10.18	□□□□□ -0.78
IDH1	YNL037C	TCM62	P38228	572 aa	Known RBP	10.18	□□□□□ -0.78
IDH1	YNL037C	EGT2	P42835	1041 aa		10.18	□□□□□ -0.78
IDH1	YNL037C	RNH201	P53942	307 aa		10.18	□□□□□ -0.78
IDH1	YNL037C	MSH5	Q12175	901 aa		10.18	□□□□□ -0.78
IDH1	YNL037C	CNE1	P27825	502 aa		10.17	□□□□□ -0.78
IDH1	YNL037C	MIA40	P36046	403 aa		10.17	□□□□□ -0.78
IDH1	YNL037C	SHM2	P37291	469 aa	Known RBP	10.17	□□□□□ -0.78
IDH1	YNL037C	YER121W	P40076	114 aa		10.17	□□□□□ -0.78
IDH1	YNL037C	PHB2	P50085	310 aa		10.17	□□□□□ -0.78
IDH1	YNL037C	YNL046W	P53956	172 aa		10.17	□□□□□ -0.78
IDH1	YNL037C	GMC1	Q04399	608 aa		10.17	□□□□□ -0.78
IDH1	YNL037C	HEM25	Q07534	307 aa		10.17	□□□□□ -0.78
IDH1	YNL037C	IES3	Q12345	250 aa		10.17	□□□□□ -0.78
IDH1	YNL037C	DCP1	Q12517	231 aa	Predicted RBP	10.17	□□□□□ -0.78
IDH1	YNL037C	RPS18A	P0CX55	146 aa	Known RBP	10.16	□□□□□ -0.78
IDH1	YNL037C	RPS18B	P0CX56	146 aa	Predicted RBP	10.16	□□□□□ -0.78
IDH1	YNL037C	SAG1	P20840	650 aa		10.16	□□□□□ -0.78
IDH1	YNL037C	HXT2	P23585	541 aa		10.16	□□□□□ -0.78
IDH1	YNL037C	HOM6	P31116	359 aa	Known RBP	10.16	□□□□□ -0.78
IDH1	YNL037C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	10.16	□□□□□ -0.78	not detected
IDH1	YNL037C	MBA1	P38300	278 aa		10.16	□□□□□ -0.78
IDH1	YNL037C	DMA2	P53924	522 aa		10.16	□□□□□ -0.78
IDH1	YNL037C	CTF19	Q02732	369 aa		10.16	□□□□□ -0.78
IDH1	YNL037C	TMC1	Q08422	150 aa	Predicted RBP	10.16	□□□□□ -0.78
IDH1	YNL037C	ATG41	Q12048	136 aa		10.16	□□□□□ -0.78
IDH1	YNL037C	YHL044W	P38727	235 aa		10.15	□□□□□ -0.78
IDH1	YNL037C	SYS1	P41544	203 aa		10.15	□□□□□ -0.78
IDH1	YNL037C	BUD8	P41698	603 aa		10.15	□□□□□ -0.78
IDH1	YNL037C	SBH2	P52871	88 aa		10.15	□□□□□ -0.78
IDH1	YNL037C	NSA1	P53136	463 aa	Predicted RBP	10.15	□□□□□ -0.78
IDH1	YNL037C	YDR248C	Q03786	193 aa		10.15	□□□□□ -0.78
IDH1	YNL037C	MRPL35	Q06678	367 aa		10.15	□□□□□ -0.78
IDH1	YNL037C	YBL113C	Q7M4S9	792 aa		10.15	□□□□□ -0.78
IDH1	YNL037C	UMP1	P38293	148 aa		10.14	□□□□□ -0.79
IDH1	YNL037C	YND1	P40009	630 aa		10.14	□□□□□ -0.79
IDH1	YNL037C	YLR283W	Q05867	314 aa		10.14	□□□□□ -0.79
IDH1	YNL037C	PIN3	Q06449	215 aa		10.14	□□□□□ -0.79
IDH1	YNL037C	CDC28	P00546	298 aa	Known RBP	10.13	□□□□□ -0.79
IDH1	YNL037C	FUR4	P05316	633 aa	Known RBP	10.13	□□□□□ -0.79
IDH1	YNL037C	PET18	P25362	215 aa		10.13	□□□□□ -0.79
IDH1	YNL037C	YGR054W	P53235	642 aa	Known RBP	10.13	□□□□□ -0.79
IDH1	YNL037C	PEX27	Q08580	376 aa		10.13	□□□□□ -0.79
IDH1	YNL037C	Q0297	Q9ZZV8	51 aa		10.13	□□□□□ -0.79
IDH1	YNL037C	NAT2	P37293	288 aa		10.12	□□□□□ -0.79
IDH1	YNL037C	MSS4	P38994	779 aa		10.12	□□□□□ -0.79
IDH1	YNL037C	YER079W	P40052	210 aa	Known RBP	10.12	□□□□□ -0.79
IDH1	YNL037C	INN1	P53901	409 aa		10.12	□□□□□ -0.79
IDH1	YNL037C	YPL067C	Q02754	198 aa		10.12	□□□□□ -0.79
IDH1	YNL037C	RGC1	Q06108	1083 aa	Known RBP	10.12	□□□□□ -0.79
IDH1	YNL037C	NGL1	Q08213	363 aa	Known RBP	10.12	□□□□□ -0.79
IDH1	YNL037C	SOG2	Q08817	791 aa		10.12	□□□□□ -0.79
IDH1	YNL037C	BPH1	P25356	2167 aa		10.11	□□□□□ -0.79
IDH1	YNL037C	TDH2	P00358	332 aa	Known RBP	10.11	□□□□□ -0.79
IDH1	YNL037C	YOX1	P34161	385 aa		10.11	□□□□□ -0.79
IDH1	YNL037C	MRPL36	P36531	177 aa		10.11	□□□□□ -0.79
IDH1	YNL037C	FCY21	P40039	528 aa		10.11	□□□□□ -0.79
IDH1	YNL037C	YIL012W	P40551	113 aa		10.11	□□□□□ -0.79
IDH1	YNL037C	GLR1	P41921	483 aa	Known RBP	10.11	□□□□□ -0.79
IDH1	YNL037C	GPI14	P47088	403 aa	Known RBP	10.11	□□□□□ -0.79
IDH1	YNL037C	SSN8	P47821	323 aa		10.11	□□□□□ -0.79
IDH1	YNL037C	TAF4	P50105	388 aa		10.11	□□□□□ -0.79
IDH1	YNL037C	TEX1	P53851	422 aa	Known RBP	10.11	□□□□□ -0.79
IDH1	YNL037C	HNT1	Q04344	158 aa	Known RBP	10.11	□□□□□ -0.79
IDH1	YNL037C	YMR254C	Q04838	102 aa		10.11	□□□□□ -0.79
IDH1	YNL037C	HUT1	Q12520	339 aa		10.11	□□□□□ -0.79
IDH1	YNL037C	RFA3	P26755	122 aa	Known RBP	10.1	□□□□□ -0.79
IDH1	YNL037C	SER2	P42941	309 aa		10.1	□□□□□ -0.79
IDH1	YNL037C	PEF1	P53238	335 aa		10.1	□□□□□ -0.79
IDH1	YNL037C	VHT1	P53241	593 aa		10.1	□□□□□ -0.79
IDH1	YNL037C	ERV29	P53337	310 aa		10.1	□□□□□ -0.79
IDH1	YNL037C	GRC3	Q07845	632 aa		10.1	□□□□□ -0.79
IDH1	YNL037C	YOR283W	Q12040	230 aa	Known RBP	10.1	□□□□□ -0.79
IDH1	YNL037C	GEP5	Q12393	293 aa		10.1	□□□□□ -0.79
IDH1	YNL037C	ERP4	Q12450	207 aa		10.1	□□□□□ -0.79
IDH1	YNL037C	CHO1	P08456	276 aa		10.09	□□□□□ -0.79
IDH1	YNL037C	PRE4	P30657	266 aa		10.09	□□□□□ -0.79
IDH1	YNL037C	SEC66	P33754	206 aa		10.09	□□□□□ -0.79
IDH1	YNL037C	HTD2	P38790	280 aa	Known RBP	10.09	□□□□□ -0.79
IDH1	YNL037C	GNA1	P43577	159 aa	Predicted RBP	10.09	□□□□□ -0.79
IDH1	YNL037C	BXI1	P48558	297 aa		10.09	□□□□□ -0.79
IDH1	YNL037C	SKP1	P52286	194 aa		10.09	□□□□□ -0.79
IDH1	YNL037C	TPO3	Q06451	622 aa		10.09	□□□□□ -0.79
IDH1	YNL037C	FCY22	Q12119	530 aa		10.09	□□□□□ -0.79
IDH1	YNL037C	RPL25	P04456	142 aa	Known RBP	10.08	□□□□□ -0.8
IDH1	YNL037C	CDC34	P14682	295 aa		10.08	□□□□□ -0.8
IDH1	YNL037C	ARO4	P32449	370 aa	Known RBP	10.08	□□□□□ -0.8
IDH1	YNL037C	ZUO1	P32527	433 aa	Known RBP	10.08	□□□□□ -0.8
IDH1	YNL037C	OSH7	P38755	437 aa		10.08	□□□□□ -0.8
IDH1	YNL037C	LNP1	P38878	278 aa		10.08	□□□□□ -0.8
IDH1	YNL037C	BNA2	P47125	453 aa		10.08	□□□□□ -0.8
IDH1	YNL037C	YOR186W	Q08560	144 aa		10.08	□□□□□ -0.8
IDH1	YNL037C	YLR108C	Q12259	485 aa		10.08	□□□□□ -0.8
IDH1	YNL037C	RPN13	O13563	156 aa		10.07	□□□□□ -0.8
IDH1	YNL037C	RPL39	P04650	51 aa		10.07	□□□□□ -0.8
IDH1	YNL037C	PEX4	P29340	183 aa		10.07	□□□□□ -0.8
IDH1	YNL037C	YBL010C	P32788	280 aa		10.07	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms