RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeast

Gene SSN8, Length 972 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSN8	YNL025C	RRG7	Q08774	242 aa	Predicted RBP	2.68	□□□□□ -1.98
SSN8	YNL025C	PCL9	Q12477	304 aa		2.68	□□□□□ -1.98
SSN8	YNL025C	SIR4	P11978	1358 aa		2.68	□□□□□ -1.98
SSN8	YNL025C	RPO41	P13433	1351 aa	Known RBP	2.68	□□□□□ -1.98
SSN8	YNL025C	EDE1	P34216	1381 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	COX5A	P00424	153 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	MET2	P08465	486 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	YOL163W	P0CF20	169 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	GRX2	P17695	143 aa	Known RBP	2.67	□□□□□ -1.98
SSN8	YNL025C	PHO80	P20052	293 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	EPT1	P22140	391 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	AVT5	P38176	459 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	NVJ1	P38881	321 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	ERV46	P39727	415 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	RGI1	P40043	161 aa	Predicted RBP	2.67	□□□□□ -1.98
SSN8	YNL025C	YER076C	P40049	302 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	MAM33	P40513	266 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	CTK3	P46963	296 aa	Predicted RBP	2.67	□□□□□ -1.98
SSN8	YNL025C	VPS25	P47142	202 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	NBP35	P52920	328 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	SHY1	P53266	389 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	SWS2	P53937	143 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	SWP1	Q02795	286 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	YML018C	Q03730	393 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	HNT1	Q04344	158 aa	Known RBP	2.67	□□□□□ -1.98
SSN8	YNL025C	SPG4	Q04438	115 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	FRQ1	Q06389	190 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	TPO3	Q06451	622 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	TAZ1	Q06510	381 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	COQ10	Q08058	207 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	THI20	Q08224	551 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	USB1	Q12208	290 aa	Known RBP	2.67	□□□□□ -1.98
SSN8	YNL025C	MCT1	Q12283	360 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	PST2	Q12335	198 aa	Known RBP	2.67	□□□□□ -1.98
SSN8	YNL025C	RAX2	Q12465	1220 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	MHT1	Q12525	324 aa		2.67	□□□□□ -1.98
SSN8	YNL025C	DRS2	P39524	1355 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	HEM4	P06174	275 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	MRS1	P07266	363 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	FCY2	P17064	533 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	DBF2	P22204	572 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	RPC19	P28000	142 aa	Known RBP	2.66	□□□□□ -1.98
SSN8	YNL025C	AEP1	P32493	518 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	YKR041W	P36134	250 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	MRPL24	P36525	258 aa	Predicted RBP	2.66	□□□□□ -1.98
SSN8	YNL025C	YBR096W	P38256	230 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	PRS3	P38689	320 aa	Known RBP	2.66	□□□□□ -1.98
SSN8	YNL025C	ECM14	P38836	430 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	COX14	P39103	70 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	GLE2	P40066	365 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	HPM1	P40481	377 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	YIL024C	P40543	189 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	MSO1	P53604	210 aa	Known RBP	2.66	□□□□□ -1.98
SSN8	YNL025C	COS1	P53822	381 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	YNL040W	P53960	456 aa	Predicted RBP	2.66	□□□□□ -1.98
SSN8	YNL025C	ARK1	P53974	638 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	DID2	P69771	204 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	UBC7	Q02159	165 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	MRX11	Q03079	207 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	HPT1	Q04178	221 aa	Known RBP	2.66	□□□□□ -1.98
SSN8	YNL025C	GMC1	Q04399	608 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	YDR278C	Q05612	105 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	HCR1	Q05775	265 aa	Known RBP	2.66	□□□□□ -1.98
SSN8	YNL025C	NKP2	Q06162	153 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	SRL1	Q08673	210 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	AKR2	Q12013	749 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	DAS2	Q12084	232 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	YPL245W	Q12179	454 aa	Known RBP	2.66	□□□□□ -1.98
SSN8	YNL025C	IES3	Q12345	250 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	HRT3	Q12347	344 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	HMS1	Q12398	434 aa		2.66	□□□□□ -1.98
SSN8	YNL025C	YMR316C-A	I2HB70	103 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	YOR304C-A	O14468	76 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	YKR104W	P0CE69	306 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	SNF4	P12904	322 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	CDC50	P25656	391 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	COQ3	P27680	312 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	FUN26	P31381	517 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	OCH1	P31755	480 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	ARO7	P32178	256 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	OAC1	P32332	324 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	TFC1	P32367	649 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	GLC7	P32598	312 aa	Known RBP	2.65	□□□□□ -1.99
SSN8	YNL025C	TRS65	P32893	560 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	POP8	P38208	133 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	FMP23	P38231	175 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	MED8	P38304	223 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	IPI1	P38803	334 aa	Predicted RBP	2.65	□□□□□ -1.99
SSN8	YNL025C	SPL2	P38839	148 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	MRPL49	P40858	161 aa	Predicted RBP	2.65	□□□□□ -1.99
SSN8	YNL025C	GPI14	P47088	403 aa	Known RBP	2.65	□□□□□ -1.99
SSN8	YNL025C	CWC27	Q02770	301 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	NEJ1	Q06148	342 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	PRP11	Q07350	266 aa	Predicted RBP	2.65	□□□□□ -1.99
SSN8	YNL025C	YOR1	P53049	1477 aa		2.65	□□□□□ -1.99
SSN8	YNL025C	SAL1	D6W196	494 aa		2.64	□□□□□ -1.99
SSN8	YNL025C	RPL25	P04456	142 aa	Known RBP	2.64	□□□□□ -1.99
SSN8	YNL025C	RPL23A	P0CX41	137 aa	Known RBP	2.64	□□□□□ -1.99
SSN8	YNL025C	RPL23B	P0CX42	137 aa	Known RBP	2.64	□□□□□ -1.99
SSN8	YNL025C	RNA14	P25298	677 aa	Known RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms