RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeastyeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP5YMR231W MET3P08536 511 aa3.88□□□□□ -1.79
PEP5YMR231W RPB3P16370 318 aaKnown RBP3.88□□□□□ -1.79
PEP5YMR231W BOS1P25385 244 aa3.88□□□□□ -1.79
PEP5YMR231W EHD3P28817 500 aa3.88□□□□□ -1.79
PEP5YMR231W SRB5P32585 307 aa3.88□□□□□ -1.79
PEP5YMR231W YKL077WP36081 392 aa3.88□□□□□ -1.79
PEP5YMR231W YBR013CP38215 129 aa3.88□□□□□ -1.79
PEP5YMR231W ANS1P38832 159 aa3.88□□□□□ -1.79
PEP5YMR231W GWT1P47026 490 aa3.88□□□□□ -1.79
PEP5YMR231W YJR111CP47148 283 aaKnown RBP3.88□□□□□ -1.79
PEP5YMR231W SAM37P50110 327 aa3.88□□□□□ -1.79
PEP5YMR231W FOL2P51601 243 aaKnown RBP3.88□□□□□ -1.79
PEP5YMR231W ARG5,6Q01217 863 aa3.88□□□□□ -1.79
PEP5YMR231W REC102Q02721 264 aa3.88□□□□□ -1.79
PEP5YMR231W MTQ2Q03920 221 aaPredicted RBP3.88□□□□□ -1.79
PEP5YMR231W SRL2Q12020 392 aa3.88□□□□□ -1.79
PEP5YMR231W ATX2Q12067 313 aa3.88□□□□□ -1.79
PEP5YMR231W LEU9Q12166 604 aaKnown RBP3.88□□□□□ -1.79
PEP5YMR231W SOD2P00447 233 aa3.88□□□□□ -1.79
PEP5YMR231W FUR4P05316 633 aaKnown RBP3.88□□□□□ -1.79
PEP5YMR231W BGL2P15703 313 aaKnown RBP3.88□□□□□ -1.79
PEP5YMR231W NUP1P20676 1076 aa3.88□□□□□ -1.79
PEP5YMR231W NPR1P22211 790 aa3.88□□□□□ -1.79
PEP5YMR231W RFA3P26755 122 aaKnown RBP3.88□□□□□ -1.79
PEP5YMR231W YIL077CP40508 320 aa3.88□□□□□ -1.79
PEP5YMR231W PAM16P42949 149 aa3.88□□□□□ -1.79
PEP5YMR231W NSE4P43124 402 aa3.88□□□□□ -1.79
PEP5YMR231W BNS1P50084 137 aa3.88□□□□□ -1.79
PEP5YMR231W SMM1P53720 384 aaKnown RBP3.88□□□□□ -1.79
PEP5YMR231W RHO5P53879 331 aaKnown RBP3.88□□□□□ -1.79
PEP5YMR231W MCH4Q08268 501 aa3.88□□□□□ -1.79
PEP5YMR231W IRC13Q08630 104 aa3.88□□□□□ -1.79
PEP5YMR231W YPR064WQ12492 139 aa3.88□□□□□ -1.79
PEP5YMR231W HIP1P06775 603 aa3.87□□□□□ -1.79
PEP5YMR231W ADK1P07170 222 aaKnown RBP3.87□□□□□ -1.79
PEP5YMR231W MDH2P22133 377 aa3.87□□□□□ -1.79
PEP5YMR231W SNC2P33328 115 aa3.87□□□□□ -1.79
PEP5YMR231W PAD1P33751 242 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
PEP5YMR231W GCS1P35197 352 aa3.87□□□□□ -1.79
PEP5YMR231W SKN7P38889 622 aa3.87□□□□□ -1.79
PEP5YMR231W POP2P39008 433 aa3.87□□□□□ -1.79
PEP5YMR231W FLX1P40464 311 aa3.87□□□□□ -1.79
PEP5YMR231W MRPS18P42847 217 aa3.87□□□□□ -1.79
PEP5YMR231W CIN2P46670 268 aa3.87□□□□□ -1.79
PEP5YMR231W TOS2P50078 622 aa3.87□□□□□ -1.79
PEP5YMR231W ART5P53244 586 aaKnown RBP3.87□□□□□ -1.79
PEP5YMR231W LEE1Q02799 301 aaKnown RBP3.87□□□□□ -1.79
PEP5YMR231W PIN2Q12057 282 aa3.87□□□□□ -1.79
PEP5YMR231W YDR262WQ12331 272 aa3.87□□□□□ -1.79
PEP5YMR231W TPI1P00942 248 aaKnown RBP3.87□□□□□ -1.79
PEP5YMR231W ILV5P06168 395 aaKnown RBP3.87□□□□□ -1.79
PEP5YMR231W NHP6AP11632 93 aaKnown RBP3.87□□□□□ -1.79
PEP5YMR231W ARF2P19146 181 aaKnown RBP3.87□□□□□ -1.79
PEP5YMR231W ADH7P25377 361 aa3.87□□□□□ -1.79
PEP5YMR231W YHC3P47040 408 aa3.87□□□□□ -1.79
PEP5YMR231W UFD1P53044 361 aa3.87□□□□□ -1.79
PEP5YMR231W SLX9P53251 210 aaPredicted RBP3.87□□□□□ -1.79
PEP5YMR231W YMR082CQ04276 118 aa3.87□□□□□ -1.79
PEP5YMR231W RTT103Q05543 409 aa3.87□□□□□ -1.79
PEP5YMR231W COQ11Q05892 277 aa3.87□□□□□ -1.79
PEP5YMR231W MCP1Q12106 302 aa3.87□□□□□ -1.79
PEP5YMR231W RLM1Q12224 676 aa3.87□□□□□ -1.79
PEP5YMR231W TFB5Q3E7C1 72 aaPredicted RBP3.87□□□□□ -1.79
PEP5YMR231W SUI1P32911 108 aaKnown RBP3.86□□□□□ -1.79
PEP5YMR231W AFR1P33304 620 aa3.86□□□□□ -1.79
PEP5YMR231W OMA1P36163 345 aa3.86□□□□□ -1.79
PEP5YMR231W STS1P38637 319 aa3.86□□□□□ -1.79
PEP5YMR231W RGA1P39083 1007 aa3.86□□□□□ -1.79
PEP5YMR231W SFH5P47008 294 aa3.86□□□□□ -1.79
PEP5YMR231W NIT2P47016 307 aa3.86□□□□□ -1.79
PEP5YMR231W YGL262WP53054 175 aa3.86□□□□□ -1.79
PEP5YMR231W COG7P53195 279 aa3.86□□□□□ -1.79
PEP5YMR231W EGD1Q02642 157 aaKnown RBP3.86□□□□□ -1.79
PEP5YMR231W CTF19Q02732 369 aa3.86□□□□□ -1.79
PEP5YMR231W YDR415CQ04033 374 aaPredicted RBP3.86□□□□□ -1.79
PEP5YMR231W IZH2Q12442 317 aa3.86□□□□□ -1.79
PEP5YMR231W SGA1P08019 549 aa3.86□□□□□ -1.79
PEP5YMR231W VMA16P23968 213 aa3.86□□□□□ -1.79
PEP5YMR231W STP22P25604 385 aa3.86□□□□□ -1.79
PEP5YMR231W PEX4P29340 183 aa3.86□□□□□ -1.79
PEP5YMR231W DBF20P32328 564 aa3.86□□□□□ -1.79
PEP5YMR231W NTF2P33331 125 aaKnown RBP3.86□□□□□ -1.79
PEP5YMR231W YBR096WP38256 230 aa3.86□□□□□ -1.79
PEP5YMR231W MOB2P43563 287 aa3.86□□□□□ -1.79
PEP5YMR231W PAU5P43575 122 aa3.86□□□□□ -1.79
PEP5YMR231W VEL1P53058 206 aa3.86□□□□□ -1.79
PEP5YMR231W RMD9P53140 646 aaKnown RBP3.86□□□□□ -1.79
PEP5YMR231W YDR387CQ04162 555 aa3.86□□□□□ -1.79
PEP5YMR231W YLR179CQ06252 201 aaKnown RBP3.86□□□□□ -1.79
PEP5YMR231W BSC6Q08280 497 aa3.86□□□□□ -1.79
PEP5YMR231W RAD28Q12021 506 aa3.86□□□□□ -1.79
PEP5YMR231W OPI3P05375 206 aa3.86□□□□□ -1.79
PEP5YMR231W DAL3P32459 195 aa3.86□□□□□ -1.79
PEP5YMR231W SLC1P33333 303 aa3.86□□□□□ -1.79
PEP5YMR231W SSS1P35179 80 aa3.86□□□□□ -1.79
PEP5YMR231W SRP102P36057 244 aaPredicted RBP3.86□□□□□ -1.79
PEP5YMR231W CDH1P53197 566 aa3.86□□□□□ -1.79
PEP5YMR231W YVH1Q02256 364 aaKnown RBP3.86□□□□□ -1.79
PEP5YMR231W SCEIP03882 235 aa3.85□□□□□ -1.79
PEP5YMR231W RNQ1P25367 405 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms