RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W DED81P38707 554 aaKnown RBP3.87□□□□□ -1.79
VPS36YLR417W SIP3P38717 1229 aa3.87□□□□□ -1.79
VPS36YLR417W KRE29P40026 464 aa3.87□□□□□ -1.79
VPS36YLR417W YIL054WP40524 105 aa3.87□□□□□ -1.79
VPS36YLR417W YJR012CP47087 207 aa3.87□□□□□ -1.79
VPS36YLR417W TMA22P47089 198 aaPredicted RBP3.87□□□□□ -1.79
VPS36YLR417W CWC21Q03375 135 aaKnown RBP3.87□□□□□ -1.79
VPS36YLR417W YMR114CQ04471 368 aaKnown RBP3.87□□□□□ -1.79
VPS36YLR417W YOS9Q99220 542 aa3.87□□□□□ -1.79
VPS36YLR417W KRE28Q04431 385 aa3.86□□□□□ -1.79
VPS36YLR417W ARC18Q05933 178 aaKnown RBP3.86□□□□□ -1.79
VPS36YLR417W DFM1Q12743 341 aaKnown RBP3.86□□□□□ -1.79
VPS36YLR417W URB1P34241 1764 aaKnown RBP3.85□□□□□ -1.79
VPS36YLR417W NTG1P31378 399 aa3.85□□□□□ -1.79
VPS36YLR417W DBP7P36120 742 aaKnown RBP3.85□□□□□ -1.79
VPS36YLR417W AVT7P40501 490 aa3.85□□□□□ -1.79
VPS36YLR417W VMA10P48836 114 aaKnown RBP3.85□□□□□ -1.79
VPS36YLR417W PRP24P49960 444 aaKnown RBP3.85□□□□□ -1.79
VPS36YLR417W YPL113CQ02961 396 aa3.85□□□□□ -1.79
VPS36YLR417W ECM19Q06011 112 aa3.85□□□□□ -1.79
VPS36YLR417W GGA1Q06336 557 aa3.85□□□□□ -1.79
VPS36YLR417W DIB1Q06819 143 aaPredicted RBP3.85□□□□□ -1.79
VPS36YLR417W YRF1-2P40105 1681 aa3.85□□□□□ -1.79
VPS36YLR417W CDC42P19073 191 aa3.84□□□□□ -1.79
VPS36YLR417W IMP1P28627 190 aa3.84□□□□□ -1.79
VPS36YLR417W MRP21P38175 177 aa3.84□□□□□ -1.79
VPS36YLR417W SER33P40510 469 aa3.84□□□□□ -1.79
VPS36YLR417W UFE1P41834 346 aa3.84□□□□□ -1.79
VPS36YLR417W NBP35P52920 328 aa3.84□□□□□ -1.79
VPS36YLR417W YGL118CP53132 145 aa3.84□□□□□ -1.79
VPS36YLR417W COS6P53344 381 aa3.84□□□□□ -1.79
VPS36YLR417W SWS2P53937 143 aa3.84□□□□□ -1.79
VPS36YLR417W YKR005CQ02203 525 aa3.84□□□□□ -1.79
VPS36YLR417W YDR209CQ03480 137 aa3.84□□□□□ -1.79
VPS36YLR417W LOA1Q06508 300 aa3.84□□□□□ -1.79
VPS36YLR417W CSM4Q08955 156 aa3.84□□□□□ -1.79
VPS36YLR417W RRP5Q05022 1729 aaKnown RBP3.84□□□□□ -1.79
VPS36YLR417W RNA15P25299 296 aaPredicted RBP3.84□□□□□ -1.8
VPS36YLR417W YCR025CP25352 136 aa3.84□□□□□ -1.8
VPS36YLR417W ATG15P25641 520 aa3.84□□□□□ -1.8
VPS36YLR417W MSN4P33749 630 aa3.84□□□□□ -1.8
VPS36YLR417W SEN34P39707 275 aa3.84□□□□□ -1.8
VPS36YLR417W NBP1P52919 319 aaPredicted RBP3.84□□□□□ -1.8
VPS36YLR417W ORM1P53224 222 aa3.84□□□□□ -1.8
VPS36YLR417W YMR316C-AI2HB70 103 aa3.83□□□□□ -1.8
VPS36YLR417W TDH2P00358 332 aaKnown RBP3.83□□□□□ -1.8
VPS36YLR417W MRPL25P23369 157 aa3.83□□□□□ -1.8
VPS36YLR417W VPS3P23643 1011 aa3.83□□□□□ -1.8
VPS36YLR417W RPC19P28000 142 aaKnown RBP3.83□□□□□ -1.8
VPS36YLR417W QRI5P32344 111 aa3.83□□□□□ -1.8
VPS36YLR417W ASP1P38986 381 aaPredicted RBP3.83□□□□□ -1.8
VPS36YLR417W SEO1P39709 593 aa3.83□□□□□ -1.8
VPS36YLR417W EDC2P40023 145 aaPredicted RBP3.83□□□□□ -1.8
VPS36YLR417W SMX2P40204 77 aaKnown RBP3.83□□□□□ -1.8
VPS36YLR417W PDS1P40316 373 aaPredicted RBP3.83□□□□□ -1.8
VPS36YLR417W RBL2P48606 106 aaKnown RBP3.83□□□□□ -1.8
VPS36YLR417W TMA20P89886 181 aaPredicted RBP3.83□□□□□ -1.8
VPS36YLR417W SDC1Q03323 175 aa3.83□□□□□ -1.8
VPS36YLR417W GET4Q12125 312 aa3.83□□□□□ -1.8
VPS36YLR417W TIR4Q12218 487 aaPredicted RBP3.83□□□□□ -1.8
VPS36YLR417W KRE6P32486 720 aa3.82□□□□□ -1.8
VPS36YLR417W UTP11P34247 250 aaPredicted RBP3.82□□□□□ -1.8
VPS36YLR417W GLG2P47011 380 aa3.82□□□□□ -1.8
VPS36YLR417W MIG2P53035 382 aa3.82□□□□□ -1.8
VPS36YLR417W ACT1P60010 375 aaKnown RBP3.82□□□□□ -1.8
VPS36YLR417W YML108WQ03759 105 aa3.82□□□□□ -1.8
VPS36YLR417W PIN3Q06449 215 aa3.82□□□□□ -1.8
VPS36YLR417W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
VPS36YLR417W YAL063C-AQ3E791 96 aa3.82□□□□□ -1.8
VPS36YLR417W TUS1Q06412 1307 aa3.82□□□□□ -1.8
VPS36YLR417W RPL4AP10664 362 aaKnown RBP3.81□□□□□ -1.8
VPS36YLR417W CAM1P29547 415 aaKnown RBP3.81□□□□□ -1.8
VPS36YLR417W MRPS9P38120 278 aa3.81□□□□□ -1.8
VPS36YLR417W YER184CP39961 794 aa3.81□□□□□ -1.8
VPS36YLR417W SMB1P40018 196 aaKnown RBP3.81□□□□□ -1.8
VPS36YLR417W YIL012WP40551 113 aa3.81□□□□□ -1.8
VPS36YLR417W YFL012WP43580 148 aa3.81□□□□□ -1.8
VPS36YLR417W RPL4BP49626 362 aaKnown RBP3.81□□□□□ -1.8
VPS36YLR417W MYO5Q04439 1219 aaKnown RBP3.81□□□□□ -1.8
VPS36YLR417W SNF8Q12483 233 aa3.81□□□□□ -1.8
VPS36YLR417W AI5_BETAQ9ZZX0 354 aa3.81□□□□□ -1.8
VPS36YLR417W OSM1P21375 501 aaKnown RBP3.81□□□□□ -1.8
VPS36YLR417W COX10P21592 462 aa3.81□□□□□ -1.8
VPS36YLR417W DPB2P24482 689 aaPredicted RBP3.81□□□□□ -1.8
VPS36YLR417W RPB9P27999 122 aa3.81□□□□□ -1.8
VPS36YLR417W LDB7P38210 180 aa3.81□□□□□ -1.8
VPS36YLR417W COQ5P49017 307 aa3.81□□□□□ -1.8
VPS36YLR417W YGR067CP53243 804 aa3.81□□□□□ -1.8
VPS36YLR417W CKA2P19454 339 aa3.8□□□□□ -1.8
VPS36YLR417W BUD23P25627 275 aaPredicted RBP3.8□□□□□ -1.8
VPS36YLR417W RPS5P26783 225 aaKnown RBP3.8□□□□□ -1.8
VPS36YLR417W MSS2P40990 351 aa3.8□□□□□ -1.8
VPS36YLR417W OTU1P43558 301 aa3.8□□□□□ -1.8
VPS36YLR417W HSH155P49955 971 aaKnown RBP3.8□□□□□ -1.8
VPS36YLR417W GCN3P14741 305 aa3.79□□□□□ -1.8
VPS36YLR417W HOM6P31116 359 aaKnown RBP3.79□□□□□ -1.8
VPS36YLR417W CAT2P32796 670 aaKnown RBP3.79□□□□□ -1.8
VPS36YLR417W POP8P38208 133 aa3.79□□□□□ -1.8
VPS36YLR417W FRT2P39734 528 aa3.79□□□□□ -1.8
VPS36YLR417W AVT6P40074 448 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms