RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C CAT5P41735 233 aa3.96□□□□□ -1.78
CDC42YLR229C YJL016WP47072 561 aa3.96□□□□□ -1.78
CDC42YLR229C DOC1P53068 250 aa3.96□□□□□ -1.78
CDC42YLR229C YGL159WP53110 370 aa3.96□□□□□ -1.78
CDC42YLR229C YNR071CP53757 342 aa3.96□□□□□ -1.78
CDC42YLR229C CTL1Q03220 320 aaKnown RBP3.96□□□□□ -1.78
CDC42YLR229C FIT1Q04433 528 aa3.96□□□□□ -1.78
CDC42YLR229C RDR1Q08904 546 aa3.96□□□□□ -1.78
CDC42YLR229C YOR385WQ08909 290 aa3.96□□□□□ -1.78
CDC42YLR229C TGS1Q12052 315 aa3.96□□□□□ -1.78
CDC42YLR229C RKI1Q12189 258 aa3.96□□□□□ -1.78
CDC42YLR229C YDR262WQ12331 272 aa3.96□□□□□ -1.78
CDC42YLR229C SLH1P53327 1967 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C PHO2P07269 559 aa3.95□□□□□ -1.78
CDC42YLR229C YOL162WP0CF19 215 aa3.95□□□□□ -1.78
CDC42YLR229C GLK1P17709 500 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C PUT3P25502 979 aaPredicted RBP3.95□□□□□ -1.78
CDC42YLR229C MSK1P32048 576 aa3.95□□□□□ -1.78
CDC42YLR229C YMC1P32331 307 aa3.95□□□□□ -1.78
CDC42YLR229C MTC7P32633 139 aa3.95□□□□□ -1.78
CDC42YLR229C EMP24P32803 203 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C ARC19P33204 171 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C SSS1P35179 80 aa3.95□□□□□ -1.78
CDC42YLR229C YOR062CP36025 268 aa3.95□□□□□ -1.78
CDC42YLR229C AUR1P36107 401 aaPredicted RBP3.95□□□□□ -1.78
CDC42YLR229C MRPL4P36517 319 aa3.95□□□□□ -1.78
CDC42YLR229C POP8P38208 133 aa3.95□□□□□ -1.78
CDC42YLR229C YHR097CP38809 366 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C PRP39P39682 629 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C YEL068CP39977 110 aa3.95□□□□□ -1.78
CDC42YLR229C RPL13BP40212 199 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C YIL166CP40445 542 aa3.95□□□□□ -1.78
CDC42YLR229C EMC5P40540 141 aa3.95□□□□□ -1.78
CDC42YLR229C QRI7P43122 407 aa3.95□□□□□ -1.78
CDC42YLR229C QRI1P43123 477 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C CIS3P47001 227 aa3.95□□□□□ -1.78
CDC42YLR229C ART5P53244 586 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C RSM27P53305 110 aa3.95□□□□□ -1.78
CDC42YLR229C PGA1P53896 198 aa3.95□□□□□ -1.78
CDC42YLR229C ACT1P60010 375 aaKnown RBP3.95□□□□□ -1.78
CDC42YLR229C ACS1Q01574 713 aa3.95□□□□□ -1.78
CDC42YLR229C ARL3Q02804 198 aa3.95□□□□□ -1.78
CDC42YLR229C RTK1Q12100 620 aaPredicted RBP3.95□□□□□ -1.78
CDC42YLR229C YDL211CQ12121 372 aa3.95□□□□□ -1.78
CDC42YLR229C SPC3Q12133 184 aa3.95□□□□□ -1.78
CDC42YLR229C INP53Q12271 1107 aa3.95□□□□□ -1.78
CDC42YLR229C EAF3Q12432 401 aa3.95□□□□□ -1.78
CDC42YLR229C RPL13AQ12690 199 aaPredicted RBP3.95□□□□□ -1.78
CDC42YLR229C COA6Q3E846 104 aa3.95□□□□□ -1.78
CDC42YLR229C TDH2P00358 332 aaKnown RBP3.94□□□□□ -1.78
CDC42YLR229C FUN19P28003 413 aaPredicted RBP3.94□□□□□ -1.78
CDC42YLR229C NRP1P32770 719 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
CDC42YLR229C ECM15P35195 104 aa3.94□□□□□ -1.78
CDC42YLR229C SRP102P36057 244 aaPredicted RBP3.94□□□□□ -1.78
CDC42YLR229C AVT5P38176 459 aa3.94□□□□□ -1.78
CDC42YLR229C ATG8P38182 117 aaRIP-Chip data3.94□□□□□ -1.78not detected
CDC42YLR229C PRS2P38620 318 aaKnown RBP3.94□□□□□ -1.78
CDC42YLR229C ECM34P38728 170 aa3.94□□□□□ -1.78
CDC42YLR229C TRR2P38816 342 aa3.94□□□□□ -1.78
CDC42YLR229C PHO90P39535 881 aa3.94□□□□□ -1.78
CDC42YLR229C PUG1P40100 303 aa3.94□□□□□ -1.78
CDC42YLR229C SLM1P40485 686 aa3.94□□□□□ -1.78
CDC42YLR229C YIR035CP40579 254 aa3.94□□□□□ -1.78
CDC42YLR229C SYS1P41544 203 aa3.94□□□□□ -1.78
CDC42YLR229C IBA57P47158 497 aa3.94□□□□□ -1.78
CDC42YLR229C YJR141WP47172 347 aaPredicted RBP3.94□□□□□ -1.78
CDC42YLR229C TOS2P50078 622 aa3.94□□□□□ -1.78
CDC42YLR229C PNC1P53184 216 aaKnown RBP3.94□□□□□ -1.78
CDC42YLR229C VHT1P53241 593 aa3.94□□□□□ -1.78
CDC42YLR229C FMP41P53889 259 aaKnown RBP3.94□□□□□ -1.78
CDC42YLR229C APM1Q00776 475 aaPredicted RBP3.94□□□□□ -1.78
CDC42YLR229C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
CDC42YLR229C MEH1Q02205 184 aa3.94□□□□□ -1.78
CDC42YLR229C RSM10Q03201 203 aa3.94□□□□□ -1.78
CDC42YLR229C TRS23Q03784 219 aa3.94□□□□□ -1.78
CDC42YLR229C SEC13Q04491 297 aaKnown RBP3.94□□□□□ -1.78
CDC42YLR229C CRT10Q08226 957 aa3.94□□□□□ -1.78
CDC42YLR229C GAL4P04386 881 aa3.93□□□□□ -1.78
CDC42YLR229C ADH3P07246 375 aaKnown RBP3.93□□□□□ -1.78
CDC42YLR229C CHO1P08456 276 aa3.93□□□□□ -1.78
CDC42YLR229C PRB1P09232 635 aa3.93□□□□□ -1.78
CDC42YLR229C YML003WP0CF16 290 aa3.93□□□□□ -1.78
CDC42YLR229C MRPL44P19956 98 aa3.93□□□□□ -1.78
CDC42YLR229C YCR100CP25606 316 aa3.93□□□□□ -1.78
CDC42YLR229C PTR2P32901 601 aa3.93□□□□□ -1.78
CDC42YLR229C SRY1P36007 326 aa3.93□□□□□ -1.78
CDC42YLR229C TCM62P38228 572 aaKnown RBP3.93□□□□□ -1.78
CDC42YLR229C YPT31P38555 223 aaKnown RBP3.93□□□□□ -1.78
CDC42YLR229C SMK1P41808 388 aa3.93□□□□□ -1.78
CDC42YLR229C NSE4P43124 402 aa3.93□□□□□ -1.78
CDC42YLR229C AGX1P43567 385 aa3.93□□□□□ -1.78
CDC42YLR229C GNA1P43577 159 aaPredicted RBP3.93□□□□□ -1.78
CDC42YLR229C SFH5P47008 294 aa3.93□□□□□ -1.78
CDC42YLR229C AIM24P47127 394 aa3.93□□□□□ -1.78
CDC42YLR229C YDL183CP48569 320 aa3.93□□□□□ -1.78
CDC42YLR229C ERV14P53173 138 aa3.93□□□□□ -1.78
CDC42YLR229C TIM21P53220 239 aa3.93□□□□□ -1.78
CDC42YLR229C BSC5P53755 489 aa3.93□□□□□ -1.78
CDC42YLR229C APJ1P53940 528 aa3.93□□□□□ -1.78
CDC42YLR229C GPI15P53961 229 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms