RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W YRB1P41920 201 aaKnown RBP2.25□□□□□ -2.05
NOP56YLR197W YJR079WP47126 109 aa2.25□□□□□ -2.05
NOP56YLR197W JHD2P47156 728 aaPredicted RBP2.25□□□□□ -2.05
NOP56YLR197W NIF3P53081 288 aa2.25□□□□□ -2.05
NOP56YLR197W MAL12P53341 584 aa2.25□□□□□ -2.05
NOP56YLR197W ALG9P53868 555 aaKnown RBP2.25□□□□□ -2.05
NOP56YLR197W COQ10Q08058 207 aa2.25□□□□□ -2.05
NOP56YLR197W RHO1P06780 209 aaKnown RBP2.24□□□□□ -2.05
NOP56YLR197W YKR104WP0CE69 306 aa2.24□□□□□ -2.05
NOP56YLR197W RPO26P20435 155 aa2.24□□□□□ -2.05
NOP56YLR197W YBR096WP38256 230 aa2.24□□□□□ -2.05
NOP56YLR197W RPC17P47076 161 aa2.24□□□□□ -2.05
NOP56YLR197W MIG2P53035 382 aa2.24□□□□□ -2.05
NOP56YLR197W RHO3Q00245 231 aaKnown RBP2.24□□□□□ -2.05
NOP56YLR197W PAN1P32521 1480 aa2.24□□□□□ -2.05
NOP56YLR197W THP2O13539 261 aaKnown RBP2.23□□□□□ -2.05
NOP56YLR197W ZWF1P11412 505 aaKnown RBP2.23□□□□□ -2.05
NOP56YLR197W EHD3P28817 500 aa2.23□□□□□ -2.05
NOP56YLR197W VPS21P36017 210 aaKnown RBP2.23□□□□□ -2.05
NOP56YLR197W MRPL39P36533 70 aa2.23□□□□□ -2.05
NOP56YLR197W GOS1P38736 223 aa2.23□□□□□ -2.05
NOP56YLR197W TEM1P38987 245 aa2.23□□□□□ -2.05
NOP56YLR197W COX15P40086 486 aa2.23□□□□□ -2.05
NOP56YLR197W SNZ3P43545 298 aa2.23□□□□□ -2.05
NOP56YLR197W OST3P48439 350 aa2.23□□□□□ -2.05
NOP56YLR197W CTF19Q02732 369 aa2.23□□□□□ -2.05
NOP56YLR197W YMR166CQ03829 368 aa2.23□□□□□ -2.05
NOP56YLR197W SPG4Q04438 115 aa2.23□□□□□ -2.05
NOP56YLR197W YDR124WQ04608 324 aa2.23□□□□□ -2.05
NOP56YLR197W YPR172WQ06608 200 aa2.23□□□□□ -2.05
NOP56YLR197W YOL019WQ08157 551 aa2.23□□□□□ -2.05
NOP56YLR197W RRP40Q08285 240 aaKnown RBP2.23□□□□□ -2.05
NOP56YLR197W SMT3Q12306 101 aaKnown RBP2.23□□□□□ -2.05
NOP56YLR197W MRX4Q12467 430 aa2.23□□□□□ -2.05
NOP56YLR197W YBL112CQ3E7Y4 105 aa2.23□□□□□ -2.05
NOP56YLR197W YBL008W-AQ3E821 79 aa2.23□□□□□ -2.05
NOP56YLR197W SEY1Q99287 776 aa2.23□□□□□ -2.05
NOP56YLR197W STE18P18852 110 aa2.22□□□□□ -2.05
NOP56YLR197W MGM101P32787 269 aaKnown RBP2.22□□□□□ -2.05
NOP56YLR197W SFC1P33303 322 aa2.22□□□□□ -2.05
NOP56YLR197W SSH1P38353 490 aaKnown RBP2.22□□□□□ -2.05
NOP56YLR197W CUE1P38428 203 aa2.22□□□□□ -2.05
NOP56YLR197W YJL144WP47009 104 aa2.22□□□□□ -2.05
NOP56YLR197W YJL028WP47062 111 aa2.22□□□□□ -2.05
NOP56YLR197W MRH4P53166 561 aa2.22□□□□□ -2.05
NOP56YLR197W SNZ2P53824 298 aa2.22□□□□□ -2.05
NOP56YLR197W GOT1Q03554 138 aa2.22□□□□□ -2.05
NOP56YLR197W YDR114CQ04597 100 aa2.22□□□□□ -2.05
NOP56YLR197W YMR226CQ05016 267 aaKnown RBP2.22□□□□□ -2.05
NOP56YLR197W DCR2Q05924 578 aa2.22□□□□□ -2.05
NOP56YLR197W GET4Q12125 312 aa2.22□□□□□ -2.05
NOP56YLR197W QCR6P00127 147 aa2.22□□□□□ -2.05
NOP56YLR197W PRP18P33411 251 aaPredicted RBP2.22□□□□□ -2.05
NOP56YLR197W DRE2P36152 348 aa2.22□□□□□ -2.05
NOP56YLR197W RIB1P38066 345 aa2.22□□□□□ -2.05
NOP56YLR197W MIC12P38341 106 aa2.22□□□□□ -2.05
NOP56YLR197W YHR127WP38833 243 aaKnown RBP2.22□□□□□ -2.05
NOP56YLR197W YHB1P39676 399 aaKnown RBP2.22□□□□□ -2.05
NOP56YLR197W RFC4P40339 323 aaKnown RBP2.22□□□□□ -2.05
NOP56YLR197W HAM1P47119 197 aaKnown RBP2.22□□□□□ -2.05
NOP56YLR197W DIA1P54005 336 aa2.22□□□□□ -2.05
NOP56YLR197W HRT1Q08273 121 aa2.22□□□□□ -2.05
NOP56YLR197W SLD7Q08457 257 aa2.22□□□□□ -2.05
NOP56YLR197W SYC1Q08553 188 aaPredicted RBP2.22□□□□□ -2.05
NOP56YLR197W TIM22Q12328 207 aa2.22□□□□□ -2.05
NOP56YLR197W PST1Q12355 444 aa2.22□□□□□ -2.05
NOP56YLR197W YPR096CO13587 100 aa2.21□□□□□ -2.06
NOP56YLR197W CDC33P07260 213 aaKnown RBP2.21□□□□□ -2.06
NOP56YLR197W DPB2P24482 689 aaPredicted RBP2.21□□□□□ -2.06
NOP56YLR197W YCR102CP25608 368 aa2.21□□□□□ -2.06
NOP56YLR197W RTC3P38804 111 aaPredicted RBP2.21□□□□□ -2.06
NOP56YLR197W ERG28P40030 148 aa2.21□□□□□ -2.06
NOP56YLR197W PRE6P40303 254 aaKnown RBP2.21□□□□□ -2.06
NOP56YLR197W YRB2P40517 327 aa2.21□□□□□ -2.06
NOP56YLR197W CUS2P53830 285 aaPredicted RBP2.21□□□□□ -2.06
NOP56YLR197W HIS3P06633 220 aa2.2□□□□□ -2.06
NOP56YLR197W YBR121C-AP0C5L4 52 aa2.2□□□□□ -2.06
NOP56YLR197W YMR31P19955 123 aa2.2□□□□□ -2.06
NOP56YLR197W RNP1P32385 249 aa2.2□□□□□ -2.06
NOP56YLR197W ASF2P32448 525 aaPredicted RBP2.2□□□□□ -2.06
NOP56YLR197W SSO1P32867 290 aa2.2□□□□□ -2.06
NOP56YLR197W CBT1P36038 271 aaPredicted RBP2.2□□□□□ -2.06
NOP56YLR197W YKL075CP36083 450 aa2.2□□□□□ -2.06
NOP56YLR197W RAD17P48581 401 aa2.2□□□□□ -2.06
NOP56YLR197W IGO1P53897 168 aa2.2□□□□□ -2.06
NOP56YLR197W EMI1Q04406 187 aa2.2□□□□□ -2.06
NOP56YLR197W YPL247CQ12523 523 aa2.2□□□□□ -2.06
NOP56YLR197W YPK2P18961 677 aa2.19□□□□□ -2.06
NOP56YLR197W TOM40P23644 387 aaKnown RBP2.19□□□□□ -2.06
NOP56YLR197W ECM13P38195 257 aa2.19□□□□□ -2.06
NOP56YLR197W URA8P38627 578 aaPredicted RBP2.19□□□□□ -2.06
NOP56YLR197W YMR144WP40214 342 aaKnown RBP2.19□□□□□ -2.06
NOP56YLR197W FCF1Q05498 189 aaPredicted RBP2.19□□□□□ -2.06
NOP56YLR197W SEI1Q06058 285 aa2.19□□□□□ -2.06
NOP56YLR197W YOR186WQ08560 144 aa2.19□□□□□ -2.06
NOP56YLR197W YPR011CQ12251 326 aa2.19□□□□□ -2.06
NOP56YLR197W YLR126CQ12288 251 aa2.19□□□□□ -2.06
NOP56YLR197W YKL183C-AQ3E765 70 aa2.19□□□□□ -2.06
NOP56YLR197W PPH21P23594 369 aa2.18□□□□□ -2.06
NOP56YLR197W SDH4P37298 181 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms