RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C YLR179CQ06252 201 aaKnown RBP1.9□□□□□ -2.11
SMD3YLR147C MHT1Q12525 324 aa1.9□□□□□ -2.11
SMD3YLR147C EBP2P36049 427 aaKnown RBP1.89□□□□□ -2.11
SMD3YLR147C PRS2P38620 318 aaKnown RBP1.89□□□□□ -2.11
SMD3YLR147C LSM4P40070 187 aaKnown RBP1.89□□□□□ -2.11
SMD3YLR147C RPL10P41805 221 aaKnown RBP1.89□□□□□ -2.11
SMD3YLR147C DAD3P69850 94 aa1.89□□□□□ -2.11
SMD3YLR147C BBP1Q12365 385 aa1.89□□□□□ -2.11
SMD3YLR147C BOL1Q3E793 110 aa1.89□□□□□ -2.11
SMD3YLR147C SPA2P23201 1466 aaKnown RBP1.88□□□□□ -2.11
SMD3YLR147C MON2P48563 1636 aaPredicted RBP1.88□□□□□ -2.11
SMD3YLR147C DNA2P38859 1522 aa1.88□□□□□ -2.11
SMD3YLR147C RAS2P01120 322 aaKnown RBP1.88□□□□□ -2.11
SMD3YLR147C Q0255P03881 472 aa1.88□□□□□ -2.11
SMD3YLR147C YHR032W-AP0C5N6 59 aa1.88□□□□□ -2.11
SMD3YLR147C VPS3P23643 1011 aa1.88□□□□□ -2.11
SMD3YLR147C COS8P38723 381 aa1.88□□□□□ -2.11
SMD3YLR147C YER189WP40104 122 aa1.88□□□□□ -2.11
SMD3YLR147C YAR1P46683 200 aa1.88□□□□□ -2.11
SMD3YLR147C ALG11P53954 548 aaKnown RBP1.88□□□□□ -2.11
SMD3YLR147C SWI1P09547 1314 aa1.88□□□□□ -2.11
SMD3YLR147C POL30P15873 258 aaKnown RBP1.87□□□□□ -2.11
SMD3YLR147C JEN1P36035 616 aa1.87□□□□□ -2.11
SMD3YLR147C SSH1P38353 490 aaKnown RBP1.87□□□□□ -2.11
SMD3YLR147C CTR2P38865 189 aa1.87□□□□□ -2.11
SMD3YLR147C ARC15P40518 154 aaRIP-Chip data1.87□□□□□ -2.11not detected
SMD3YLR147C MRH4P53166 561 aa1.87□□□□□ -2.11
SMD3YLR147C COX20Q04935 205 aa1.87□□□□□ -2.11
SMD3YLR147C COQ10Q08058 207 aa1.87□□□□□ -2.11
SMD3YLR147C YLR462WO13556 202 aa1.86□□□□□ -2.11
SMD3YLR147C RPL24AP04449 155 aaKnown RBP1.86□□□□□ -2.11
SMD3YLR147C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
SMD3YLR147C DOG1P38774 246 aa1.86□□□□□ -2.11
SMD3YLR147C PET100P38958 111 aa1.86□□□□□ -2.11
SMD3YLR147C YHB1P39676 399 aaKnown RBP1.86□□□□□ -2.11
SMD3YLR147C YEL075CP39972 122 aa1.86□□□□□ -2.11
SMD3YLR147C SMB1P40018 196 aaKnown RBP1.86□□□□□ -2.11
SMD3YLR147C THO1P40040 218 aaKnown RBP1.86□□□□□ -2.11
SMD3YLR147C SNZ3P43545 298 aa1.86□□□□□ -2.11
SMD3YLR147C EMC2P47133 292 aaKnown RBP1.86□□□□□ -2.11
SMD3YLR147C YDR124WQ04608 324 aa1.86□□□□□ -2.11
SMD3YLR147C ATG17Q06410 417 aa1.86□□□□□ -2.11
SMD3YLR147C MSA2P36157 363 aa1.85□□□□□ -2.11
SMD3YLR147C MRPL37P36532 105 aa1.85□□□□□ -2.11
SMD3YLR147C YHR125WP38831 101 aa1.85□□□□□ -2.11
SMD3YLR147C CTF19Q02732 369 aa1.85□□□□□ -2.11
SMD3YLR147C PRM15Q03262 622 aa1.85□□□□□ -2.11
SMD3YLR147C YPR147CQ06522 304 aaKnown RBP1.85□□□□□ -2.11
SMD3YLR147C COX5AP00424 153 aa1.84□□□□□ -2.11
SMD3YLR147C OM45P16547 393 aa1.84□□□□□ -2.11
SMD3YLR147C SCL1P21243 252 aaKnown RBP1.84□□□□□ -2.11
SMD3YLR147C YBR096WP38256 230 aa1.84□□□□□ -2.11
SMD3YLR147C AKR2Q12013 749 aa1.84□□□□□ -2.11
SMD3YLR147C YKR104WP0CE69 306 aa1.83□□□□□ -2.12
SMD3YLR147C DAL82P21705 255 aa1.83□□□□□ -2.12
SMD3YLR147C HOM6P31116 359 aaKnown RBP1.83□□□□□ -2.12
SMD3YLR147C GLG2P47011 380 aa1.83□□□□□ -2.12
SMD3YLR147C GOT1Q03554 138 aa1.83□□□□□ -2.12
SMD3YLR147C ADH6Q04894 360 aaKnown RBP1.83□□□□□ -2.12
SMD3YLR147C YLR030WQ07967 263 aa1.83□□□□□ -2.12
SMD3YLR147C SYC1Q08553 188 aaPredicted RBP1.83□□□□□ -2.12
SMD3YLR147C CDC7P06243 507 aa1.82□□□□□ -2.12
SMD3YLR147C MRP1P10662 321 aaKnown RBP1.82□□□□□ -2.12
SMD3YLR147C MRX3P38172 270 aa1.82□□□□□ -2.12
SMD3YLR147C GOS1P38736 223 aa1.82□□□□□ -2.12
SMD3YLR147C PEP8P40335 379 aa1.82□□□□□ -2.12
SMD3YLR147C YGR026WP53217 278 aa1.82□□□□□ -2.12
SMD3YLR147C YMR279CQ03263 540 aa1.82□□□□□ -2.12
SMD3YLR147C MRPS8Q03799 155 aa1.82□□□□□ -2.12
SMD3YLR147C FAR8Q05040 523 aa1.82□□□□□ -2.12
SMD3YLR147C FBA1P14540 359 aaKnown RBP1.81□□□□□ -2.12
SMD3YLR147C PEX4P29340 183 aa1.81□□□□□ -2.12
SMD3YLR147C MEP1P40260 492 aa1.81□□□□□ -2.12
SMD3YLR147C YGL159WP53110 370 aa1.81□□□□□ -2.12
SMD3YLR147C SNZ2P53824 298 aa1.81□□□□□ -2.12
SMD3YLR147C YOR186WQ08560 144 aa1.81□□□□□ -2.12
SMD3YLR147C DSF1P0CX08 502 aa1.8□□□□□ -2.12
SMD3YLR147C YNR073CP0CX09 502 aa1.8□□□□□ -2.12
SMD3YLR147C ERG24P32462 438 aaKnown RBP1.8□□□□□ -2.12
SMD3YLR147C SPG4Q04438 115 aa1.8□□□□□ -2.12
SMD3YLR147C ATO3Q12359 275 aa1.8□□□□□ -2.12
SMD3YLR147C BIG1P38813 335 aa1.79□□□□□ -2.12
SMD3YLR147C GTR2P53290 341 aa1.79□□□□□ -2.12
SMD3YLR147C YPR172WQ06608 200 aa1.79□□□□□ -2.12
SMD3YLR147C RRP40Q08285 240 aaKnown RBP1.79□□□□□ -2.12
SMD3YLR147C MSF1P08425 469 aa1.78□□□□□ -2.12
SMD3YLR147C MDH3P32419 343 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
SMD3YLR147C RTT105P40063 208 aa1.78□□□□□ -2.12
SMD3YLR147C YER135CP40082 130 aa1.78□□□□□ -2.12
SMD3YLR147C YNL046WP53956 172 aa1.78□□□□□ -2.12
SMD3YLR147C INM2Q05533 292 aa1.78□□□□□ -2.12
SMD3YLR147C YPR098CQ06089 161 aa1.78□□□□□ -2.12
SMD3YLR147C SDO1Q07953 250 aaKnown RBP1.78□□□□□ -2.12
SMD3YLR147C SIR4P11978 1358 aa1.77□□□□□ -2.13
SMD3YLR147C SGE1P33335 543 aa1.77□□□□□ -2.13
SMD3YLR147C MRPL39P36533 70 aa1.77□□□□□ -2.13
SMD3YLR147C PHO88P38264 188 aaPredicted RBP1.77□□□□□ -2.13
SMD3YLR147C FZO1P38297 855 aa1.77□□□□□ -2.13
SMD3YLR147C CYT2Q00873 224 aa1.77□□□□□ -2.13
SMD3YLR147C YDR209CQ03480 137 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms