RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C YND1P40009 630 aa9.87□□□□□ -0.83
YKR040CYKR040C YER079WP40052 210 aaKnown RBP9.87□□□□□ -0.83
YKR040CYKR040C SGN1P40561 250 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
YKR040CYKR040C YJL218WP40892 196 aaKnown RBP9.87□□□□□ -0.83
YKR040CYKR040C BNA2P47125 453 aa9.87□□□□□ -0.83
YKR040CYKR040C DOC1P53068 250 aa9.87□□□□□ -0.83
YKR040CYKR040C FRE8Q12209 686 aa9.87□□□□□ -0.83
YKR040CYKR040C HXT2P23585 541 aa9.86□□□□□ -0.83
YKR040CYKR040C YOX1P34161 385 aa9.86□□□□□ -0.83
YKR040CYKR040C TIR4Q12218 487 aaPredicted RBP9.86□□□□□ -0.83
YKR040CYKR040C RDL1Q12305 139 aaKnown RBP9.86□□□□□ -0.83
YKR040CYKR040C YCL048W-AQ2V2Q2 79 aa9.86□□□□□ -0.83
YKR040CYKR040C URA2P07259 2214 aaKnown RBP9.85□□□□□ -0.83
YKR040CYKR040C TDH2P00358 332 aaKnown RBP9.85□□□□□ -0.83
YKR040CYKR040C PHO4P07270 312 aaKnown RBP9.85□□□□□ -0.83
YKR040CYKR040C FMP23P38231 175 aa9.85□□□□□ -0.83
YKR040CYKR040C ABM1P47146 123 aa9.85□□□□□ -0.83
YKR040CYKR040C SCW4P53334 386 aaKnown RBP9.85□□□□□ -0.83
YKR040CYKR040C YLR283WQ05867 314 aa9.85□□□□□ -0.83
YKR040CYKR040C FCY22Q12119 530 aa9.85□□□□□ -0.83
YKR040CYKR040C SPS4P09937 338 aa9.84□□□□□ -0.83
YKR040CYKR040C APA2P22108 325 aa9.84□□□□□ -0.83
YKR040CYKR040C CCZ1P38273 704 aa9.84□□□□□ -0.83
YKR040CYKR040C UMP1P38293 148 aa9.84□□□□□ -0.83
YKR040CYKR040C YHC3P47040 408 aa9.84□□□□□ -0.83
YKR040CYKR040C TAF4P50105 388 aa9.84□□□□□ -0.83
YKR040CYKR040C NSA1P53136 463 aaPredicted RBP9.84□□□□□ -0.83
YKR040CYKR040C SMM1P53720 384 aaKnown RBP9.84□□□□□ -0.83
YKR040CYKR040C RCF1Q03713 159 aa9.84□□□□□ -0.83
YKR040CYKR040C RRP17Q04031 235 aaPredicted RBP9.84□□□□□ -0.83
YKR040CYKR040C PIN3Q06449 215 aa9.84□□□□□ -0.83
YKR040CYKR040C TPO3Q06451 622 aa9.84□□□□□ -0.83
YKR040CYKR040C RRP15Q06511 250 aaPredicted RBP9.84□□□□□ -0.83
YKR040CYKR040C MDM36Q06820 579 aa9.84□□□□□ -0.83
YKR040CYKR040C MRX9Q07349 420 aaKnown RBP9.84□□□□□ -0.83
YKR040CYKR040C CDC28P00546 298 aaKnown RBP9.83□□□□□ -0.84
YKR040CYKR040C HIS3P06633 220 aa9.83□□□□□ -0.84
YKR040CYKR040C RPS18AP0CX55 146 aaKnown RBP9.83□□□□□ -0.84
YKR040CYKR040C RPS18BP0CX56 146 aaPredicted RBP9.83□□□□□ -0.84
YKR040CYKR040C NAT2P37293 288 aa9.83□□□□□ -0.84
YKR040CYKR040C RMD6P39975 231 aa9.83□□□□□ -0.84
YKR040CYKR040C IES5P40060 125 aa9.83□□□□□ -0.84
YKR040CYKR040C RTT105P40063 208 aa9.83□□□□□ -0.84
YKR040CYKR040C SLM1P40485 686 aa9.83□□□□□ -0.84
YKR040CYKR040C BUD8P41698 603 aa9.83□□□□□ -0.84
YKR040CYKR040C GEP7P53171 287 aa9.83□□□□□ -0.84
YKR040CYKR040C YMR254CQ04838 102 aa9.83□□□□□ -0.84
YKR040CYKR040C CSI2Q08054 341 aa9.83□□□□□ -0.84
YKR040CYKR040C RPL25P04456 142 aaKnown RBP9.82□□□□□ -0.84
YKR040CYKR040C CNE1P27825 502 aa9.82□□□□□ -0.84
YKR040CYKR040C YBR137WP38276 179 aa9.82□□□□□ -0.84
YKR040CYKR040C SOL3P38858 249 aa9.82□□□□□ -0.84
YKR040CYKR040C YNR064CP53750 290 aa9.82□□□□□ -0.84
YKR040CYKR040C MGR3Q04472 501 aa9.82□□□□□ -0.84
YKR040CYKR040C YDR114CQ04597 100 aa9.82□□□□□ -0.84
YKR040CYKR040C YLR358CO13565 187 aa9.81□□□□□ -0.84
YKR040CYKR040C FUR4P05316 633 aaKnown RBP9.81□□□□□ -0.84
YKR040CYKR040C OSH7P38755 437 aa9.81□□□□□ -0.84
YKR040CYKR040C MSS4P38994 779 aa9.81□□□□□ -0.84
YKR040CYKR040C GON7P46984 123 aa9.81□□□□□ -0.84
YKR040CYKR040C SSN8P47821 323 aa9.81□□□□□ -0.84
YKR040CYKR040C TDA1Q03533 586 aa9.81□□□□□ -0.84
YKR040CYKR040C EAF3Q12432 401 aa9.81□□□□□ -0.84
YKR040CYKR040C PET18P25362 215 aa9.8□□□□□ -0.84
YKR040CYKR040C MTC7P32633 139 aa9.8□□□□□ -0.84
YKR040CYKR040C TMA19P35691 167 aaKnown RBP9.8□□□□□ -0.84
YKR040CYKR040C YPL067CQ02754 198 aa9.8□□□□□ -0.84
YKR040CYKR040C HUT1Q12520 339 aa9.8□□□□□ -0.84
YKR040CYKR040C REP2P03872 296 aa9.79□□□□□ -0.84
YKR040CYKR040C GPX2P38143 162 aa9.79□□□□□ -0.84
YKR040CYKR040C JLP2P40206 208 aa9.79□□□□□ -0.84
YKR040CYKR040C MRH4P53166 561 aa9.79□□□□□ -0.84
YKR040CYKR040C BUD25P85052 153 aa9.79□□□□□ -0.84
YKR040CYKR040C CTF19Q02732 369 aa9.79□□□□□ -0.84
YKR040CYKR040C GRC3Q07845 632 aa9.79□□□□□ -0.84
YKR040CYKR040C MRPS28P21771 286 aa9.78□□□□□ -0.84
YKR040CYKR040C VMA11P32842 164 aa9.78□□□□□ -0.84
YKR040CYKR040C LNP1P38878 278 aa9.78□□□□□ -0.84
YKR040CYKR040C BNA6P43619 295 aa9.78□□□□□ -0.84
YKR040CYKR040C GPI14P47088 403 aaKnown RBP9.78□□□□□ -0.84
YKR040CYKR040C UFD1P53044 361 aa9.78□□□□□ -0.84
YKR040CYKR040C IRC25Q07951 179 aa9.78□□□□□ -0.84
YKR040CYKR040C GCD1P09032 578 aaPredicted RBP9.77□□□□□ -0.85
YKR040CYKR040C RPB9P27999 122 aa9.77□□□□□ -0.85
YKR040CYKR040C IMP1P28627 190 aa9.77□□□□□ -0.85
YKR040CYKR040C ARO4P32449 370 aaKnown RBP9.77□□□□□ -0.85
YKR040CYKR040C YBL010CP32788 280 aa9.77□□□□□ -0.85
YKR040CYKR040C YKL063CP35725 167 aa9.77□□□□□ -0.85
YKR040CYKR040C SMB1P40018 196 aaKnown RBP9.77□□□□□ -0.85
YKR040CYKR040C SYS1P41544 203 aa9.77□□□□□ -0.85
YKR040CYKR040C CPR8P53728 308 aa9.77□□□□□ -0.85
YKR040CYKR040C CAC2Q04199 468 aa9.77□□□□□ -0.85
YKR040CYKR040C YOR186WQ08560 144 aa9.77□□□□□ -0.85
YKR040CYKR040C MPD1Q12404 318 aaKnown RBP9.77□□□□□ -0.85
YKR040CYKR040C YMR105W-AQ8TGS8 64 aa9.77□□□□□ -0.85
YKR040CYKR040C MRPL36P36531 177 aa9.76□□□□□ -0.85
YKR040CYKR040C GPI18P38211 433 aa9.76□□□□□ -0.85
YKR040CYKR040C ATG18P43601 500 aa9.76□□□□□ -0.85
YKR040CYKR040C MOT3P54785 490 aaKnown RBP9.76□□□□□ -0.85
YKR040CYKR040C PRM15Q03262 622 aa9.76□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms