RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C MRS2Q01926 470 aa1.78□□□□□ -2.12
SHE2YKL130C SDC1Q03323 175 aa1.78□□□□□ -2.12
SHE2YKL130C YMR244WQ04018 355 aa1.78□□□□□ -2.12
SHE2YKL130C PEX10Q05568 337 aa1.78□□□□□ -2.12
SHE2YKL130C YPR098CQ06089 161 aa1.78□□□□□ -2.12
SHE2YKL130C RRS1Q08746 203 aaKnown RBP1.78□□□□□ -2.12
SHE2YKL130C DFM1Q12743 341 aaKnown RBP1.78□□□□□ -2.12
SHE2YKL130C YPL119C-AQ3E751 87 aa1.78□□□□□ -2.12
SHE2YKL130C AI5_BETAQ9ZZX0 354 aa1.78□□□□□ -2.12
SHE2YKL130C VMR1P38735 1592 aa1.77□□□□□ -2.13
SHE2YKL130C RHO1P06780 209 aaKnown RBP1.77□□□□□ -2.13
SHE2YKL130C TCP1P12612 559 aaKnown RBP1.77□□□□□ -2.13
SHE2YKL130C PCL1P24867 279 aa1.77□□□□□ -2.13
SHE2YKL130C VPS21P36017 210 aaKnown RBP1.77□□□□□ -2.13
SHE2YKL130C POP8P38208 133 aa1.77□□□□□ -2.13
SHE2YKL130C PHO89P38361 574 aa1.77□□□□□ -2.13
SHE2YKL130C AVT6P40074 448 aa1.77□□□□□ -2.13
SHE2YKL130C UFE1P41834 346 aa1.77□□□□□ -2.13
SHE2YKL130C YRB1P41920 201 aaKnown RBP1.77□□□□□ -2.13
SHE2YKL130C YJR079WP47126 109 aa1.77□□□□□ -2.13
SHE2YKL130C JHD2P47156 728 aaPredicted RBP1.77□□□□□ -2.13
SHE2YKL130C PGU1P47180 361 aa1.77□□□□□ -2.13
SHE2YKL130C GIM3P53900 129 aa1.77□□□□□ -2.13
SHE2YKL130C TLG1Q03322 224 aa1.77□□□□□ -2.13
SHE2YKL130C DCR2Q05924 578 aa1.77□□□□□ -2.13
SHE2YKL130C ECM19Q06011 112 aa1.77□□□□□ -2.13
SHE2YKL130C LOA1Q06508 300 aa1.77□□□□□ -2.13
SHE2YKL130C DIB1Q06819 143 aaPredicted RBP1.77□□□□□ -2.13
SHE2YKL130C YDL144CQ07589 356 aa1.77□□□□□ -2.13
SHE2YKL130C RFM1Q12192 310 aa1.77□□□□□ -2.13
SHE2YKL130C GIS3Q12418 502 aa1.77□□□□□ -2.13
SHE2YKL130C YAL067W-AQ8TGK6 75 aa1.77□□□□□ -2.13
SHE2YKL130C KRE5P22023 1365 aa1.76□□□□□ -2.13
SHE2YKL130C SAC3P46674 1301 aa1.76□□□□□ -2.13
SHE2YKL130C JIP3O13555 125 aa1.76□□□□□ -2.13
SHE2YKL130C ADH1P00330 348 aaKnown RBP1.76□□□□□ -2.13
SHE2YKL130C RPS19AP07280 144 aaKnown RBP1.76□□□□□ -2.13
SHE2YKL130C RPS19BP07281 144 aaPredicted RBP1.76□□□□□ -2.13
SHE2YKL130C YBR121C-AP0C5L4 52 aa1.76□□□□□ -2.13
SHE2YKL130C STE18P18852 110 aa1.76□□□□□ -2.13
SHE2YKL130C CKA2P19454 339 aa1.76□□□□□ -2.13
SHE2YKL130C PHO80P20052 293 aa1.76□□□□□ -2.13
SHE2YKL130C YCR025CP25352 136 aa1.76□□□□□ -2.13
SHE2YKL130C ERG2P32352 222 aa1.76□□□□□ -2.13
SHE2YKL130C SSO1P32867 290 aa1.76□□□□□ -2.13
SHE2YKL130C SGE1P33335 543 aa1.76□□□□□ -2.13
SHE2YKL130C UTH1P36135 365 aa1.76□□□□□ -2.13
SHE2YKL130C MAL32P38158 584 aa1.76□□□□□ -2.13
SHE2YKL130C HEK2P38199 381 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SHE2YKL130C PRE6P40303 254 aaKnown RBP1.76□□□□□ -2.13
SHE2YKL130C CAX4P53223 239 aa1.76□□□□□ -2.13
SHE2YKL130C MAL12P53341 584 aa1.76□□□□□ -2.13
SHE2YKL130C ZRG17P53735 605 aa1.76□□□□□ -2.13
SHE2YKL130C FMP41P53889 259 aaKnown RBP1.76□□□□□ -2.13
SHE2YKL130C ACT1P60010 375 aaKnown RBP1.76□□□□□ -2.13
SHE2YKL130C MRPS17Q03246 237 aaPredicted RBP1.76□□□□□ -2.13
SHE2YKL130C TSA2Q04120 196 aa1.76□□□□□ -2.13
SHE2YKL130C YMR226CQ05016 267 aaKnown RBP1.76□□□□□ -2.13
SHE2YKL130C ATG38Q05789 226 aaKnown RBP1.76□□□□□ -2.13
SHE2YKL130C NNT1Q05874 261 aa1.76□□□□□ -2.13
SHE2YKL130C DXO1Q06349 442 aa1.76□□□□□ -2.13
SHE2YKL130C COQ10Q08058 207 aa1.76□□□□□ -2.13
SHE2YKL130C YAL063C-AQ3E791 96 aa1.76□□□□□ -2.13
SHE2YKL130C SEY1Q99287 776 aa1.76□□□□□ -2.13
SHE2YKL130C YOL085CQ99345 113 aa1.76□□□□□ -2.13
SHE2YKL130C SEC7P11075 2009 aaKnown RBP1.76□□□□□ -2.13
SHE2YKL130C BCK1Q01389 1478 aa1.75□□□□□ -2.13
SHE2YKL130C RAD9P14737 1309 aa1.75□□□□□ -2.13
SHE2YKL130C YMR31P19955 123 aa1.75□□□□□ -2.13
SHE2YKL130C PRP18P33411 251 aaPredicted RBP1.75□□□□□ -2.13
SHE2YKL130C DBP7P36120 742 aaKnown RBP1.75□□□□□ -2.13
SHE2YKL130C MRPL39P36533 70 aa1.75□□□□□ -2.13
SHE2YKL130C RIB1P38066 345 aa1.75□□□□□ -2.13
SHE2YKL130C HMT1P38074 348 aa1.75□□□□□ -2.13
SHE2YKL130C MRPS9P38120 278 aa1.75□□□□□ -2.13
SHE2YKL130C MIC12P38341 106 aa1.75□□□□□ -2.13
SHE2YKL130C YHL049CP38722 271 aa1.75□□□□□ -2.13
SHE2YKL130C YHL044WP38727 235 aa1.75□□□□□ -2.13
SHE2YKL130C FRT2P39734 528 aa1.75□□□□□ -2.13
SHE2YKL130C SYS1P41544 203 aa1.75□□□□□ -2.13
SHE2YKL130C YFL012WP43580 148 aa1.75□□□□□ -2.13
SHE2YKL130C RPE1P46969 238 aa1.75□□□□□ -2.13
SHE2YKL130C COQ5P49017 307 aa1.75□□□□□ -2.13
SHE2YKL130C YGR018CP53211 109 aa1.75□□□□□ -2.13
SHE2YKL130C SWT21P53873 357 aaPredicted RBP1.75□□□□□ -2.13
SHE2YKL130C AAH1P53909 347 aa1.75□□□□□ -2.13
SHE2YKL130C RHO3Q00245 231 aaKnown RBP1.75□□□□□ -2.13
SHE2YKL130C SPG4Q04438 115 aa1.75□□□□□ -2.13
SHE2YKL130C MRX8Q05473 314 aa1.75□□□□□ -2.13
SHE2YKL130C SSQ1Q05931 657 aaPredicted RBP1.75□□□□□ -2.13
SHE2YKL130C YPR147CQ06522 304 aaKnown RBP1.75□□□□□ -2.13
SHE2YKL130C PLB3Q08108 686 aa1.75□□□□□ -2.13
SHE2YKL130C FLO11P08640 1367 aa1.74□□□□□ -2.13
SHE2YKL130C ROM2P51862 1356 aaKnown RBP1.74□□□□□ -2.13
SHE2YKL130C AUS1Q08409 1394 aa1.74□□□□□ -2.13
SHE2YKL130C CDC33P07260 213 aaKnown RBP1.74□□□□□ -2.13
SHE2YKL130C YKR104WP0CE69 306 aa1.74□□□□□ -2.13
SHE2YKL130C FUS3P16892 353 aaKnown RBP1.74□□□□□ -2.13
SHE2YKL130C COX10P21592 462 aa1.74□□□□□ -2.13
SHE2YKL130C DPB2P24482 689 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms