RNA–Protein interactions for RNA: YKL088W

CAB3, Transcript of Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis, yeast

Gene CAB3, Length 1,716 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAB3	YKL088W	SUI1	P32911	108 aa	Known RBP	4.25	□□□□□ -1.73
CAB3	YKL088W	YKL097C	P34245	136 aa		4.25	□□□□□ -1.73
CAB3	YKL088W	YPT35	P38815	214 aa	Known RBP	4.25	□□□□□ -1.73
CAB3	YKL088W	ISC1	P40015	477 aa	Known RBP	4.25	□□□□□ -1.73
CAB3	YKL088W	SHO1	P40073	367 aa		4.25	□□□□□ -1.73
CAB3	YKL088W	AZF1	P41696	914 aa		4.25	□□□□□ -1.73
CAB3	YKL088W	YJL043W	P47053	257 aa		4.25	□□□□□ -1.73
CAB3	YKL088W	CCC1	P47818	322 aa		4.25	□□□□□ -1.73
CAB3	YKL088W	TOS2	P50078	622 aa		4.25	□□□□□ -1.73
CAB3	YKL088W	SSU72	P53538	206 aa	Predicted RBP	4.25	□□□□□ -1.73
CAB3	YKL088W	COG5	P53951	403 aa		4.25	□□□□□ -1.73
CAB3	YKL088W	SDO1	Q07953	250 aa	Known RBP	4.25	□□□□□ -1.73
CAB3	YKL088W	YOL073C	Q08232	322 aa		4.25	□□□□□ -1.73
CAB3	YKL088W	PST2	Q12335	198 aa	Known RBP	4.25	□□□□□ -1.73
CAB3	YKL088W	RPN13	O13563	156 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	FLO10	P36170	1169 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	PRS4	P38063	326 aa	Predicted RBP	4.24	□□□□□ -1.73
CAB3	YKL088W	SPO73	P40031	143 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	SOK1	P40317	901 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	RFC4	P40339	323 aa	Known RBP	4.24	□□□□□ -1.73
CAB3	YKL088W	MOB1	P40484	314 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	SER33	P40510	469 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	YNL181W	P53878	407 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	RSC9	Q03124	581 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	GAL83	Q04739	417 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	ADH6	Q04894	360 aa	Known RBP	4.24	□□□□□ -1.73
CAB3	YKL088W	SKI7	Q08491	747 aa	Predicted RBP	4.24	□□□□□ -1.73
CAB3	YKL088W	DCN1	Q12395	269 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	RRI1	Q12468	440 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	RNA15	P25299	296 aa	Predicted RBP	4.24	□□□□□ -1.73
CAB3	YKL088W	RPS2	P25443	254 aa	Known RBP	4.24	□□□□□ -1.73
CAB3	YKL088W	BUB3	P26449	341 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	POP5	P28005	173 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	SCO2	P38072	301 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	MED6	P38782	295 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	PFS1	P38872	237 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	PHO90	P39535	881 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	PRE6	P40303	254 aa	Known RBP	4.24	□□□□□ -1.73
CAB3	YKL088W	NBP35	P52920	328 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	RRN9	P53437	365 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	BER1	Q06688	274 aa	Known RBP	4.24	□□□□□ -1.73
CAB3	YKL088W	CDA2	Q06703	312 aa		4.24	□□□□□ -1.73
CAB3	YKL088W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CAB3	YKL088W	YGK3	Q12222	375 aa	Predicted RBP	4.24	□□□□□ -1.73
CAB3	YKL088W	AQY1	P0CD91	305 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	MRP1	P10662	321 aa	Known RBP	4.23	□□□□□ -1.73
CAB3	YKL088W	LHP1	P33399	275 aa	Known RBP	4.23	□□□□□ -1.73
CAB3	YKL088W	ANR2	P36090	516 aa	Predicted RBP	4.23	□□□□□ -1.73
CAB3	YKL088W	PRS2	P38620	318 aa	Known RBP	4.23	□□□□□ -1.73
CAB3	YKL088W	ARN2	P38724	620 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	GGC1	P38988	300 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	LYS1	P38998	373 aa	RIP-Chip data	4.23	□□□□□ -1.73	RIP-Chip
CAB3	YKL088W	NSA1	P53136	463 aa	Predicted RBP	4.23	□□□□□ -1.73
CAB3	YKL088W	IMP4	P53941	290 aa	Known RBP	4.23	□□□□□ -1.73
CAB3	YKL088W	CWC27	Q02770	301 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	GIS1	Q03833	894 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	PBP4	Q07362	185 aa	Known RBP	4.23	□□□□□ -1.73
CAB3	YKL088W	ATG10	Q07879	167 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	YLR036C	Q07986	203 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	DAP1	Q12091	152 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	FYV7	Q12247	151 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	ORT1	Q12375	292 aa		4.23	□□□□□ -1.73
CAB3	YKL088W	MET2	P08465	486 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	RPS1B	P23248	255 aa	Known RBP	4.22	□□□□□ -1.73
CAB3	YKL088W	CNB1	P25296	175 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	CPR4	P25334	318 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	ATG22	P25568	528 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	PMT2	P31382	759 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	TOA2	P32774	122 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	APQ12	P40532	138 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	PSA1	P41940	361 aa	Known RBP	4.22	□□□□□ -1.73
CAB3	YKL088W	IBA57	P47158	497 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	YIP1	P53039	248 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	NUP49	Q02199	472 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	YMR279C	Q03263	540 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	TRM82	Q03774	444 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	DIC1	Q06143	298 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	NEJ1	Q06148	342 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	SRO7	Q12038	1033 aa		4.22	□□□□□ -1.73
CAB3	YKL088W	YKR104W	P0CE69	306 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	FPR1	P20081	114 aa	Known RBP	4.21	□□□□□ -1.73
CAB3	YKL088W	IFM1	P25038	676 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
CAB3	YKL088W	CTS1	P29029	562 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	TCA17	P32613	152 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	YGR201C	P42936	225 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	YGR210C	P42942	411 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	YGL204C	P53089	101 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	MKC7	P53379	596 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	YDC1	Q02896	317 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	YDR249C	Q03787	373 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	YRA1	Q12159	226 aa	Known RBP	4.21	□□□□□ -1.73
CAB3	YKL088W	MRX4	Q12467	430 aa		4.21	□□□□□ -1.73
CAB3	YKL088W	FAB1	P34756	2278 aa		4.21	□□□□□ -1.74
CAB3	YKL088W	STF2	P16965	84 aa		4.21	□□□□□ -1.74
CAB3	YKL088W	PET9	P18239	318 aa	Known RBP	4.21	□□□□□ -1.74
CAB3	YKL088W	YCR007C	P25354	239 aa		4.21	□□□□□ -1.74
CAB3	YKL088W	ERG9	P29704	444 aa		4.21	□□□□□ -1.74
CAB3	YKL088W	ACB1	P31787	87 aa		4.21	□□□□□ -1.74
CAB3	YKL088W	SRP102	P36057	244 aa	Predicted RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 36 ms