RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W AGE2P40529 298 aa3.68□□□□□ -1.82
TFA1YKL028W CLD1P53264 445 aa3.68□□□□□ -1.82
TFA1YKL028W DXO1Q06349 442 aa3.68□□□□□ -1.82
TFA1YKL028W YMR316C-AI2HB70 103 aa3.67□□□□□ -1.82
TFA1YKL028W HHF1P02309 103 aaKnown RBP3.67□□□□□ -1.82
TFA1YKL028W RPS28BP0C0X0 67 aaKnown RBP3.67□□□□□ -1.82
TFA1YKL028W ISY1P21374 235 aaPredicted RBP3.67□□□□□ -1.82
TFA1YKL028W TAH1P25638 111 aaPredicted RBP3.67□□□□□ -1.82
TFA1YKL028W CAM1P29547 415 aaKnown RBP3.67□□□□□ -1.82
TFA1YKL028W ATS1P31386 333 aa3.67□□□□□ -1.82
TFA1YKL028W YHL049CP38722 271 aa3.67□□□□□ -1.82
TFA1YKL028W YFH7P43591 353 aa3.67□□□□□ -1.82
TFA1YKL028W MDV1P47025 714 aa3.67□□□□□ -1.82
TFA1YKL028W SDS23P53172 527 aa3.67□□□□□ -1.82
TFA1YKL028W YGR042WP53227 271 aa3.67□□□□□ -1.82
TFA1YKL028W LIP2Q06005 328 aa3.67□□□□□ -1.82
TFA1YKL028W YOR292CQ08743 309 aa3.67□□□□□ -1.82
TFA1YKL028W YLR053CQ12026 108 aa3.67□□□□□ -1.82
TFA1YKL028W RIO1Q12196 484 aaKnown RBP3.67□□□□□ -1.82
TFA1YKL028W RPS28AQ3E7X9 67 aaPredicted RBP3.67□□□□□ -1.82
TFA1YKL028W RPS24AP0CX31 135 aaKnown RBP3.66□□□□□ -1.82
TFA1YKL028W RPS24BP0CX32 135 aaKnown RBP3.66□□□□□ -1.82
TFA1YKL028W CPR1P14832 162 aaKnown RBP3.66□□□□□ -1.82
TFA1YKL028W GRX2P17695 143 aaKnown RBP3.66□□□□□ -1.82
TFA1YKL028W RPB5P20434 215 aa3.66□□□□□ -1.82
TFA1YKL028W SEC1P30619 724 aaKnown RBP3.66□□□□□ -1.82
TFA1YKL028W CLG1P35190 452 aa3.66□□□□□ -1.82
TFA1YKL028W YKR041WP36134 250 aa3.66□□□□□ -1.82
TFA1YKL028W SEN34P39707 275 aa3.66□□□□□ -1.82
TFA1YKL028W PTI1P39927 425 aaPredicted RBP3.66□□□□□ -1.82
TFA1YKL028W YER076CP40049 302 aa3.66□□□□□ -1.82
TFA1YKL028W PRM5P40476 318 aa3.66□□□□□ -1.82
TFA1YKL028W YJR085CP47131 105 aaKnown RBP3.66□□□□□ -1.82
TFA1YKL028W YNL046WP53956 172 aa3.66□□□□□ -1.82
TFA1YKL028W ARO80Q04052 950 aa3.66□□□□□ -1.82
TFA1YKL028W YLR036CQ07986 203 aa3.66□□□□□ -1.82
TFA1YKL028W YOR283WQ12040 230 aaKnown RBP3.66□□□□□ -1.82
TFA1YKL028W NOT5Q12514 560 aaPredicted RBP3.66□□□□□ -1.82
TFA1YKL028W SEN2P16658 377 aa3.65□□□□□ -1.83
TFA1YKL028W ERD2P18414 219 aa3.65□□□□□ -1.83
TFA1YKL028W OAC1P32332 324 aa3.65□□□□□ -1.83
TFA1YKL028W AVT7P40501 490 aa3.65□□□□□ -1.83
TFA1YKL028W YJL213WP40896 331 aa3.65□□□□□ -1.83
TFA1YKL028W PRM10P42946 383 aa3.65□□□□□ -1.83
TFA1YKL028W MOG1P47123 218 aa3.65□□□□□ -1.83
TFA1YKL028W COS6P53344 381 aa3.65□□□□□ -1.83
TFA1YKL028W ADD37Q03233 198 aa3.65□□□□□ -1.83
TFA1YKL028W YPL229WQ99395 206 aa3.65□□□□□ -1.83
TFA1YKL028W MRS1P07266 363 aa3.64□□□□□ -1.83
TFA1YKL028W PHO2P07269 559 aa3.64□□□□□ -1.83
TFA1YKL028W CUP2P15315 225 aa3.64□□□□□ -1.83
TFA1YKL028W MDH3P32419 343 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
TFA1YKL028W FRM2P37261 193 aa3.64□□□□□ -1.83
TFA1YKL028W YAP3P38749 330 aa3.64□□□□□ -1.83
TFA1YKL028W ECM14P38836 430 aa3.64□□□□□ -1.83
TFA1YKL028W YNL208WP40159 199 aaKnown RBP3.64□□□□□ -1.83
TFA1YKL028W YIL152WP40455 235 aa3.64□□□□□ -1.83
TFA1YKL028W PSA1P41940 361 aaKnown RBP3.64□□□□□ -1.83
TFA1YKL028W YJR054WP47114 497 aa3.64□□□□□ -1.83
TFA1YKL028W MRH4P53166 561 aa3.64□□□□□ -1.83
TFA1YKL028W FMP41P53889 259 aaKnown RBP3.64□□□□□ -1.83
TFA1YKL028W YDR248CQ03786 193 aa3.64□□□□□ -1.83
TFA1YKL028W YLR281CQ05863 155 aa3.64□□□□□ -1.83
TFA1YKL028W YOL024WQ08172 172 aa3.64□□□□□ -1.83
TFA1YKL028W YOR186WQ08560 144 aa3.64□□□□□ -1.83
TFA1YKL028W RDI1Q12434 202 aa3.64□□□□□ -1.83
TFA1YKL028W MCK1P21965 375 aaKnown RBP3.63□□□□□ -1.83
TFA1YKL028W YCR025CP25352 136 aa3.63□□□□□ -1.83
TFA1YKL028W CAT2P32796 670 aaKnown RBP3.63□□□□□ -1.83
TFA1YKL028W PEX17P40155 199 aa3.63□□□□□ -1.83
TFA1YKL028W PDS1P40316 373 aaPredicted RBP3.63□□□□□ -1.83
TFA1YKL028W PCI8P40512 444 aa3.63□□□□□ -1.83
TFA1YKL028W EGT2P42835 1041 aa3.63□□□□□ -1.83
TFA1YKL028W YFL067WP43537 175 aa3.63□□□□□ -1.83
TFA1YKL028W FAR7P43592 221 aa3.63□□□□□ -1.83
TFA1YKL028W COS10P52924 374 aa3.63□□□□□ -1.83
TFA1YKL028W WSC2P53832 503 aa3.63□□□□□ -1.83
TFA1YKL028W CWC25P53854 179 aaKnown RBP3.63□□□□□ -1.83
TFA1YKL028W CRZ1P53968 678 aa3.63□□□□□ -1.83
TFA1YKL028W FMP42Q04991 504 aa3.63□□□□□ -1.83
TFA1YKL028W YPR127WQ06494 345 aa3.63□□□□□ -1.83
TFA1YKL028W YPL278CQ08990 100 aa3.63□□□□□ -1.83
TFA1YKL028W RAX2Q12465 1220 aa3.63□□□□□ -1.83
TFA1YKL028W NAG1Q8TGN9 163 aa3.63□□□□□ -1.83
TFA1YKL028W DRS2P39524 1355 aa3.63□□□□□ -1.83
TFA1YKL028W PET54P10834 293 aa3.62□□□□□ -1.83
TFA1YKL028W CPR4P25334 318 aa3.62□□□□□ -1.83
TFA1YKL028W TRX3P25372 127 aa3.62□□□□□ -1.83
TFA1YKL028W UBC8P28263 218 aa3.62□□□□□ -1.83
TFA1YKL028W ARO7P32178 256 aa3.62□□□□□ -1.83
TFA1YKL028W TIP20P33891 701 aa3.62□□□□□ -1.83
TFA1YKL028W APS1P35181 156 aa3.62□□□□□ -1.83
TFA1YKL028W YFL064CP43540 174 aa3.62□□□□□ -1.83
TFA1YKL028W BNS1P50084 137 aa3.62□□□□□ -1.83
TFA1YKL028W YGL204CP53089 101 aa3.62□□□□□ -1.83
TFA1YKL028W YGR015CP53208 328 aa3.62□□□□□ -1.83
TFA1YKL028W YPL113CQ02961 396 aa3.62□□□□□ -1.83
TFA1YKL028W YLR177WQ06251 628 aa3.62□□□□□ -1.83
TFA1YKL028W SYC1Q08553 188 aaPredicted RBP3.62□□□□□ -1.83
TFA1YKL028W YDL085C-AQ3E7B7 68 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms