RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C GLC7P32598 312 aaKnown RBP8.4□□□□□ -1.06
MET28YIR017C UMP1P38293 148 aa8.4□□□□□ -1.06
MET28YIR017C ARC40P38328 384 aaKnown RBP8.4□□□□□ -1.06
MET28YIR017C SOL3P38858 249 aa8.4□□□□□ -1.06
MET28YIR017C CIN2P46670 268 aa8.4□□□□□ -1.06
MET28YIR017C CRZ1P53968 678 aa8.4□□□□□ -1.06
MET28YIR017C TPO3Q06451 622 aa8.4□□□□□ -1.06
MET28YIR017C YLR358CO13565 187 aa8.39□□□□□ -1.07
MET28YIR017C SPS4P09937 338 aa8.39□□□□□ -1.07
MET28YIR017C SPS100P13130 326 aa8.39□□□□□ -1.07
MET28YIR017C CAP2P13517 287 aa8.39□□□□□ -1.07
MET28YIR017C PET18P25362 215 aa8.39□□□□□ -1.07
MET28YIR017C SEC66P33754 206 aa8.39□□□□□ -1.07
MET28YIR017C HTD2P38790 280 aaKnown RBP8.39□□□□□ -1.07
MET28YIR017C HPA3P39979 161 aa8.39□□□□□ -1.07
MET28YIR017C GPI14P47088 403 aaKnown RBP8.39□□□□□ -1.07
MET28YIR017C PHB2P50085 310 aa8.39□□□□□ -1.07
MET28YIR017C VHT1P53241 593 aa8.39□□□□□ -1.07
MET28YIR017C YPR098CQ06089 161 aa8.39□□□□□ -1.07
MET28YIR017C MRX9Q07349 420 aaKnown RBP8.39□□□□□ -1.07
MET28YIR017C RPL6BP05739 176 aaKnown RBP8.38□□□□□ -1.07
MET28YIR017C GCD1P09032 578 aaPredicted RBP8.38□□□□□ -1.07
MET28YIR017C RPS23AP0CX29 145 aaKnown RBP8.38□□□□□ -1.07
MET28YIR017C RPS23BP0CX30 145 aa8.38□□□□□ -1.07
MET28YIR017C MSI1P13712 422 aa8.38□□□□□ -1.07
MET28YIR017C SPT14P32363 452 aa8.38□□□□□ -1.07
MET28YIR017C NPL6P32832 435 aa8.38□□□□□ -1.07
MET28YIR017C REC114P32841 428 aa8.38□□□□□ -1.07
MET28YIR017C MTR2P34232 184 aaKnown RBP8.38□□□□□ -1.07
MET28YIR017C FAT1P38225 669 aa8.38□□□□□ -1.07
MET28YIR017C YIL029CP40538 142 aa8.38□□□□□ -1.07
MET28YIR017C OST1P41543 476 aaKnown RBP8.38□□□□□ -1.07
MET28YIR017C BUD8P41698 603 aa8.38□□□□□ -1.07
MET28YIR017C RPS0BP46654 252 aaKnown RBP8.38□□□□□ -1.07
MET28YIR017C SPR28Q04921 423 aa8.38□□□□□ -1.07
MET28YIR017C YND1P40009 630 aa8.37□□□□□ -1.07
MET28YIR017C BUD25P85052 153 aa8.37□□□□□ -1.07
MET28YIR017C YDC1Q02896 317 aa8.37□□□□□ -1.07
MET28YIR017C DLT1Q04216 342 aa8.37□□□□□ -1.07
MET28YIR017C HNT1Q04344 158 aaKnown RBP8.37□□□□□ -1.07
MET28YIR017C PEX10Q05568 337 aa8.37□□□□□ -1.07
MET28YIR017C INP53Q12271 1107 aa8.37□□□□□ -1.07
MET28YIR017C ODC2Q99297 307 aa8.37□□□□□ -1.07
MET28YIR017C RFA3P26755 122 aaKnown RBP8.36□□□□□ -1.07
MET28YIR017C YBL010CP32788 280 aa8.36□□□□□ -1.07
MET28YIR017C AIM20P40451 204 aa8.36□□□□□ -1.07
MET28YIR017C BXI1P48558 297 aa8.36□□□□□ -1.07
MET28YIR017C NSA1P53136 463 aaPredicted RBP8.36□□□□□ -1.07
MET28YIR017C TYW3P53177 273 aa8.36□□□□□ -1.07
MET28YIR017C SKO1Q02100 647 aa8.36□□□□□ -1.07
MET28YIR017C GPM1P00950 247 aaKnown RBP8.35□□□□□ -1.07
MET28YIR017C SAG1P20840 650 aa8.35□□□□□ -1.07
MET28YIR017C YKL107WP34251 309 aa8.35□□□□□ -1.07
MET28YIR017C NAT2P37293 288 aa8.35□□□□□ -1.07
MET28YIR017C GNA1P43577 159 aaPredicted RBP8.35□□□□□ -1.07
MET28YIR017C TPN1P53099 579 aa8.35□□□□□ -1.07
MET28YIR017C YGR042WP53227 271 aa8.35□□□□□ -1.07
MET28YIR017C GIM3P53900 129 aa8.35□□□□□ -1.07
MET28YIR017C LSM7P53905 115 aaKnown RBP8.35□□□□□ -1.07
MET28YIR017C YDR248CQ03786 193 aa8.35□□□□□ -1.07
MET28YIR017C KEI1Q06346 221 aa8.35□□□□□ -1.07
MET28YIR017C PML1Q07930 204 aaPredicted RBP8.35□□□□□ -1.07
MET28YIR017C NCE102Q12207 173 aaRIP-Chip data8.35□□□□□ -1.07not detected
MET28YIR017C CYC1P00044 109 aaPredicted RBP8.34□□□□□ -1.07
MET28YIR017C CDC28P00546 298 aaKnown RBP8.34□□□□□ -1.07
MET28YIR017C RPL25P04456 142 aaKnown RBP8.34□□□□□ -1.07
MET28YIR017C CHO1P08456 276 aa8.34□□□□□ -1.07
MET28YIR017C URA6P15700 204 aa8.34□□□□□ -1.07
MET28YIR017C ARO4P32449 370 aaKnown RBP8.34□□□□□ -1.07
MET28YIR017C MSS1P32559 526 aaPredicted RBP8.34□□□□□ -1.07
MET28YIR017C MTC7P32633 139 aa8.34□□□□□ -1.07
MET28YIR017C YKL063CP35725 167 aa8.34□□□□□ -1.07
MET28YIR017C YIL060WP40519 144 aa8.34□□□□□ -1.07
MET28YIR017C CAT5P41735 233 aa8.34□□□□□ -1.07
MET28YIR017C EGT2P42835 1041 aa8.34□□□□□ -1.07
MET28YIR017C QRI1P43123 477 aaKnown RBP8.34□□□□□ -1.07
MET28YIR017C FMP48P53233 369 aa8.34□□□□□ -1.07
MET28YIR017C TIM10P87108 93 aa8.34□□□□□ -1.07
MET28YIR017C HTZ1Q12692 134 aaKnown RBP8.34□□□□□ -1.07
MET28YIR017C CDC39P25655 2108 aaKnown RBP8.33□□□□□ -1.08
MET28YIR017C YML003WP0CF16 290 aa8.33□□□□□ -1.08
MET28YIR017C HNM1P19807 563 aa8.33□□□□□ -1.08
MET28YIR017C PUP1P25043 261 aa8.33□□□□□ -1.08
MET28YIR017C VMA5P31412 392 aaKnown RBP8.33□□□□□ -1.08
MET28YIR017C HYM1P32464 399 aa8.33□□□□□ -1.08
MET28YIR017C SPC29P33419 253 aa8.33□□□□□ -1.08
MET28YIR017C YER079WP40052 210 aaKnown RBP8.33□□□□□ -1.08
MET28YIR017C AIM25P47140 327 aa8.33□□□□□ -1.08
MET28YIR017C SSN8P47821 323 aa8.33□□□□□ -1.08
MET28YIR017C SKP1P52286 194 aa8.33□□□□□ -1.08
MET28YIR017C SED1Q01589 338 aa8.33□□□□□ -1.08
MET28YIR017C UTP15Q04305 513 aaKnown RBP8.33□□□□□ -1.08
MET28YIR017C PIN3Q06449 215 aa8.33□□□□□ -1.08
MET28YIR017C YLR031WQ07978 186 aa8.33□□□□□ -1.08
MET28YIR017C ERP4Q12450 207 aa8.33□□□□□ -1.08
MET28YIR017C PET54P10834 293 aa8.32□□□□□ -1.08
MET28YIR017C DAL80P26343 269 aa8.32□□□□□ -1.08
MET28YIR017C ECM14P38836 430 aa8.32□□□□□ -1.08
MET28YIR017C YER121WP40076 114 aa8.32□□□□□ -1.08
MET28YIR017C YMR279CQ03263 540 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 85.6 ms