RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C ARO9P38840 513 aaPredicted RBP6.72□□□□□ -1.33
SNP1YIL061C SER3P40054 469 aa6.72□□□□□ -1.33
SNP1YIL061C QDR1P40475 563 aa6.72□□□□□ -1.33
SNP1YIL061C IDP2P41939 412 aa6.72□□□□□ -1.33
SNP1YIL061C ECO1P43605 281 aa6.72□□□□□ -1.33
SNP1YIL061C HSV2P50079 448 aaPredicted RBP6.72□□□□□ -1.33
SNP1YIL061C PHB2P50085 310 aa6.72□□□□□ -1.33
SNP1YIL061C ACS2P52910 683 aaKnown RBP6.72□□□□□ -1.33
SNP1YIL061C YNL165WP53891 406 aa6.72□□□□□ -1.33
SNP1YIL061C RNH201P53942 307 aa6.72□□□□□ -1.33
SNP1YIL061C DID2P69771 204 aa6.72□□□□□ -1.33
SNP1YIL061C YDR209CQ03480 137 aa6.72□□□□□ -1.33
SNP1YIL061C NUP53Q03790 475 aa6.72□□□□□ -1.33
SNP1YIL061C SYM1Q06563 197 aa6.72□□□□□ -1.33
SNP1YIL061C PET20Q99373 253 aa6.72□□□□□ -1.33
SNP1YIL061C ACC1Q00955 2233 aaKnown RBP6.71□□□□□ -1.34
SNP1YIL061C AAC1P04710 309 aa6.71□□□□□ -1.34
SNP1YIL061C RIP1P08067 215 aa6.71□□□□□ -1.34
SNP1YIL061C DBP2P24783 546 aaKnown RBP6.71□□□□□ -1.34
SNP1YIL061C RFA3P26755 122 aaKnown RBP6.71□□□□□ -1.34
SNP1YIL061C AFG1P32317 509 aa6.71□□□□□ -1.34
SNP1YIL061C SUA5P32579 426 aa6.71□□□□□ -1.34
SNP1YIL061C YBR096WP38256 230 aa6.71□□□□□ -1.34
SNP1YIL061C CTK2P46962 323 aa6.71□□□□□ -1.34
SNP1YIL061C PRY1P47032 299 aa6.71□□□□□ -1.34
SNP1YIL061C NUP42P49686 430 aaKnown RBP6.71□□□□□ -1.34
SNP1YIL061C LYS5P50113 272 aa6.71□□□□□ -1.34
SNP1YIL061C UBC12P52491 188 aa6.71□□□□□ -1.34
SNP1YIL061C YGL159WP53110 370 aa6.71□□□□□ -1.34
SNP1YIL061C AEP3Q12089 606 aa6.71□□□□□ -1.34
SNP1YIL061C PRM4Q12498 284 aa6.71□□□□□ -1.34
SNP1YIL061C COX5BP00425 151 aa6.7□□□□□ -1.34
SNP1YIL061C MES1P00958 751 aaKnown RBP6.7□□□□□ -1.34
SNP1YIL061C YFR010W-AP0C5N0 62 aa6.7□□□□□ -1.34
SNP1YIL061C IFM1P25038 676 aa6.7□□□□□ -1.34
SNP1YIL061C PAN3P36102 679 aaPredicted RBP6.7□□□□□ -1.34
SNP1YIL061C NAT2P37293 288 aa6.7□□□□□ -1.34
SNP1YIL061C YMR144WP40214 342 aaKnown RBP6.7□□□□□ -1.34
SNP1YIL061C NIF3P53081 288 aa6.7□□□□□ -1.34
SNP1YIL061C JAC1P53193 184 aa6.7□□□□□ -1.34
SNP1YIL061C PBP1P53297 722 aaKnown RBP6.7□□□□□ -1.34
SNP1YIL061C OKP1P53298 406 aa6.7□□□□□ -1.34
SNP1YIL061C RSM23Q01163 450 aa6.7□□□□□ -1.34
SNP1YIL061C YDR387CQ04162 555 aa6.7□□□□□ -1.34
SNP1YIL061C FEX1Q08913 375 aa6.7□□□□□ -1.34
SNP1YIL061C SEN1Q00416 2231 aaKnown RBP6.69□□□□□ -1.34
SNP1YIL061C YBR085C-AO43137 85 aa6.69□□□□□ -1.34
SNP1YIL061C MAG1P22134 296 aaKnown RBP6.69□□□□□ -1.34
SNP1YIL061C RFA1P22336 621 aaKnown RBP6.69□□□□□ -1.34
SNP1YIL061C VAM7P32912 316 aa6.69□□□□□ -1.34
SNP1YIL061C MRPL36P36531 177 aa6.69□□□□□ -1.34
SNP1YIL061C SKP1P52286 194 aa6.69□□□□□ -1.34
SNP1YIL061C NSA1P53136 463 aaPredicted RBP6.69□□□□□ -1.34
SNP1YIL061C HOL1P53389 586 aa6.69□□□□□ -1.34
SNP1YIL061C ATG4P53867 494 aa6.69□□□□□ -1.34
SNP1YIL061C ISU1Q03020 165 aa6.69□□□□□ -1.34
SNP1YIL061C DIG2Q03373 323 aaKnown RBP6.69□□□□□ -1.34
SNP1YIL061C YML018CQ03730 393 aa6.69□□□□□ -1.34
SNP1YIL061C ATP14Q12349 124 aa6.69□□□□□ -1.34
SNP1YIL061C BLM10P43583 2143 aa6.68□□□□□ -1.34
SNP1YIL061C SED4P25365 1065 aa6.68□□□□□ -1.34
SNP1YIL061C CPR3P25719 182 aa6.68□□□□□ -1.34
SNP1YIL061C NUD1P32336 851 aa6.68□□□□□ -1.34
SNP1YIL061C AGA2P32781 87 aa6.68□□□□□ -1.34
SNP1YIL061C BFR1P38934 470 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
SNP1YIL061C BMT5P40493 336 aa6.68□□□□□ -1.34
SNP1YIL061C TAD2P47058 250 aa6.68□□□□□ -1.34
SNP1YIL061C ADO1P47143 340 aaKnown RBP6.68□□□□□ -1.34
SNP1YIL061C SOK2P53438 785 aaPredicted RBP6.68□□□□□ -1.34
SNP1YIL061C MRPL19P53875 158 aa6.68□□□□□ -1.34
SNP1YIL061C ANT1Q06497 328 aa6.68□□□□□ -1.34
SNP1YIL061C MRX9Q07349 420 aaKnown RBP6.68□□□□□ -1.34
SNP1YIL061C TEL1P38110 2787 aa6.68□□□□□ -1.34
SNP1YIL061C TDH3P00359 332 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
SNP1YIL061C RPS31P05759 152 aaKnown RBP6.67□□□□□ -1.34
SNP1YIL061C RPS16AP0CX51 143 aaKnown RBP6.67□□□□□ -1.34
SNP1YIL061C RPS16BP0CX52 143 aaKnown RBP6.67□□□□□ -1.34
SNP1YIL061C MCM1P11746 286 aa6.67□□□□□ -1.34
SNP1YIL061C RPL30P14120 105 aaKnown RBP6.67□□□□□ -1.34
SNP1YIL061C SEC22P22214 214 aa6.67□□□□□ -1.34
SNP1YIL061C LDB16P25587 256 aa6.67□□□□□ -1.34
SNP1YIL061C ERG3P32353 365 aa6.67□□□□□ -1.34
SNP1YIL061C MRP20P32387 263 aa6.67□□□□□ -1.34
SNP1YIL061C EMP24P32803 203 aaKnown RBP6.67□□□□□ -1.34
SNP1YIL061C MRT4P33201 236 aaKnown RBP6.67□□□□□ -1.34
SNP1YIL061C POP8P38208 133 aa6.67□□□□□ -1.34
SNP1YIL061C MGE1P38523 228 aa6.67□□□□□ -1.34
SNP1YIL061C MOB2P43563 287 aa6.67□□□□□ -1.34
SNP1YIL061C RPS0BP46654 252 aaKnown RBP6.67□□□□□ -1.34
SNP1YIL061C GWT1P47026 490 aa6.67□□□□□ -1.34
SNP1YIL061C AVT4P50944 713 aa6.67□□□□□ -1.34
SNP1YIL061C YNR048WP53740 393 aa6.67□□□□□ -1.34
SNP1YIL061C NRG1Q03125 231 aa6.67□□□□□ -1.34
SNP1YIL061C RSM10Q03201 203 aa6.67□□□□□ -1.34
SNP1YIL061C YDR248CQ03786 193 aa6.67□□□□□ -1.34
SNP1YIL061C FEX2Q08991 375 aa6.67□□□□□ -1.34
SNP1YIL061C TFC7Q12415 435 aa6.67□□□□□ -1.34
SNP1YIL061C ERP4Q12450 207 aa6.67□□□□□ -1.34
SNP1YIL061C TFB5Q3E7C1 72 aaPredicted RBP6.67□□□□□ -1.34
SNP1YIL061C CDC28P00546 298 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms