RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W SMM1P53720 384 aaKnown RBP8.6□□□□□ -1.03
UBA4YHR111W MOT3P54785 490 aaKnown RBP8.6□□□□□ -1.03
UBA4YHR111W TMA20P89886 181 aaPredicted RBP8.6□□□□□ -1.03
UBA4YHR111W SPR28Q04921 423 aa8.6□□□□□ -1.03
UBA4YHR111W HEM25Q07534 307 aa8.6□□□□□ -1.03
UBA4YHR111W SIR2P06700 562 aa8.59□□□□□ -1.03
UBA4YHR111W CDC31P06704 161 aaKnown RBP8.59□□□□□ -1.03
UBA4YHR111W HXT2P23585 541 aa8.59□□□□□ -1.03
UBA4YHR111W ARO7P32178 256 aa8.59□□□□□ -1.03
UBA4YHR111W SFK1P35735 353 aa8.59□□□□□ -1.03
UBA4YHR111W YER079WP40052 210 aaKnown RBP8.59□□□□□ -1.03
UBA4YHR111W SCW11P53189 542 aa8.59□□□□□ -1.03
UBA4YHR111W ORT1Q12375 292 aa8.59□□□□□ -1.03
UBA4YHR111W SNC2P33328 115 aa8.58□□□□□ -1.04
UBA4YHR111W RMD6P39975 231 aa8.58□□□□□ -1.04
UBA4YHR111W SLM1P40485 686 aa8.58□□□□□ -1.04
UBA4YHR111W TAF4P50105 388 aa8.58□□□□□ -1.04
UBA4YHR111W GEP7P53171 287 aa8.58□□□□□ -1.04
UBA4YHR111W YNR064CP53750 290 aa8.58□□□□□ -1.04
UBA4YHR111W YDR114CQ04597 100 aa8.58□□□□□ -1.04
UBA4YHR111W PIN3Q06449 215 aa8.58□□□□□ -1.04
UBA4YHR111W FCY22Q12119 530 aa8.58□□□□□ -1.04
UBA4YHR111W TDH2P00358 332 aaKnown RBP8.57□□□□□ -1.04
UBA4YHR111W PHO4P07270 312 aaKnown RBP8.57□□□□□ -1.04
UBA4YHR111W RPB9P27999 122 aa8.57□□□□□ -1.04
UBA4YHR111W NSA1P53136 463 aaPredicted RBP8.57□□□□□ -1.04
UBA4YHR111W MRX9Q07349 420 aaKnown RBP8.57□□□□□ -1.04
UBA4YHR111W QCR7P00128 127 aa8.56□□□□□ -1.04
UBA4YHR111W RPL15AP05748 204 aaKnown RBP8.56□□□□□ -1.04
UBA4YHR111W ERG24P32462 438 aaKnown RBP8.56□□□□□ -1.04
UBA4YHR111W VMA11P32842 164 aa8.56□□□□□ -1.04
UBA4YHR111W PCL6P40038 420 aa8.56□□□□□ -1.04
UBA4YHR111W BUD8P41698 603 aa8.56□□□□□ -1.04
UBA4YHR111W GON7P46984 123 aa8.56□□□□□ -1.04
UBA4YHR111W RBL2P48606 106 aaKnown RBP8.56□□□□□ -1.04
UBA4YHR111W DOC1P53068 250 aa8.56□□□□□ -1.04
UBA4YHR111W RPL15BP54780 204 aaPredicted RBP8.56□□□□□ -1.04
UBA4YHR111W GRX3Q03835 250 aa8.56□□□□□ -1.04
UBA4YHR111W NKP1Q12493 238 aa8.56□□□□□ -1.04
UBA4YHR111W CCW14O13547 238 aa8.55□□□□□ -1.04
UBA4YHR111W CDC28P00546 298 aaKnown RBP8.55□□□□□ -1.04
UBA4YHR111W GCN4P03069 281 aa8.55□□□□□ -1.04
UBA4YHR111W SPS4P09937 338 aa8.55□□□□□ -1.04
UBA4YHR111W NAT2P37293 288 aa8.55□□□□□ -1.04
UBA4YHR111W YJL218WP40892 196 aaKnown RBP8.55□□□□□ -1.04
UBA4YHR111W IMO32P53219 342 aa8.55□□□□□ -1.04
UBA4YHR111W SCW4P53334 386 aaKnown RBP8.55□□□□□ -1.04
UBA4YHR111W YPL067CQ02754 198 aa8.55□□□□□ -1.04
UBA4YHR111W SPO19Q03029 223 aa8.55□□□□□ -1.04
UBA4YHR111W YMR254CQ04838 102 aa8.55□□□□□ -1.04
UBA4YHR111W YLR283WQ05867 314 aa8.55□□□□□ -1.04
UBA4YHR111W ATG17Q06410 417 aa8.55□□□□□ -1.04
UBA4YHR111W TIR4Q12218 487 aaPredicted RBP8.55□□□□□ -1.04
UBA4YHR111W HUT1Q12520 339 aa8.55□□□□□ -1.04
UBA4YHR111W YER145C-AA0A023PYF4 145 aa8.54□□□□□ -1.04
UBA4YHR111W YLR358CO13565 187 aa8.54□□□□□ -1.04
UBA4YHR111W GCD1P09032 578 aaPredicted RBP8.54□□□□□ -1.04
UBA4YHR111W SHE2P36068 246 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
UBA4YHR111W GPI18P38211 433 aa8.54□□□□□ -1.04
UBA4YHR111W OSH7P38755 437 aa8.54□□□□□ -1.04
UBA4YHR111W SSN8P47821 323 aa8.54□□□□□ -1.04
UBA4YHR111W MRPS28P21771 286 aa8.54□□□□□ -1.04
UBA4YHR111W RPL24BP24000 155 aaKnown RBP8.54□□□□□ -1.04
UBA4YHR111W CCZ1P38273 704 aa8.54□□□□□ -1.04
UBA4YHR111W UMP1P38293 148 aa8.54□□□□□ -1.04
UBA4YHR111W GZF3P42944 551 aaKnown RBP8.54□□□□□ -1.04
UBA4YHR111W PRM15Q03262 622 aa8.54□□□□□ -1.04
UBA4YHR111W GPN3Q06543 272 aa8.54□□□□□ -1.04
UBA4YHR111W GRC3Q07845 632 aa8.54□□□□□ -1.04
UBA4YHR111W IRC25Q07951 179 aa8.54□□□□□ -1.04
UBA4YHR111W EAF3Q12432 401 aa8.54□□□□□ -1.04
UBA4YHR111W REP2P03872 296 aa8.53□□□□□ -1.04
UBA4YHR111W RPL25P04456 142 aaKnown RBP8.53□□□□□ -1.04
UBA4YHR111W FUR4P05316 633 aaKnown RBP8.53□□□□□ -1.04
UBA4YHR111W CNE1P27825 502 aa8.53□□□□□ -1.04
UBA4YHR111W RCF1Q03713 159 aa8.53□□□□□ -1.04
UBA4YHR111W YDR179W-AQ03983 463 aa8.53□□□□□ -1.04
UBA4YHR111W CAC2Q04199 468 aa8.53□□□□□ -1.04
UBA4YHR111W YDL009CQ12210 107 aa8.53□□□□□ -1.04
UBA4YHR111W YOR029WQ12243 111 aa8.53□□□□□ -1.04
UBA4YHR111W MPD1Q12404 318 aaKnown RBP8.53□□□□□ -1.04
UBA4YHR111W YMR105W-AQ8TGS8 64 aa8.53□□□□□ -1.04
UBA4YHR111W HIS3P06633 220 aa8.52□□□□□ -1.05
UBA4YHR111W IMP1P28627 190 aa8.52□□□□□ -1.05
UBA4YHR111W IES6P32617 166 aa8.52□□□□□ -1.05
UBA4YHR111W MTC7P32633 139 aa8.52□□□□□ -1.05
UBA4YHR111W MRPL36P36531 177 aa8.52□□□□□ -1.05
UBA4YHR111W FMP23P38231 175 aa8.52□□□□□ -1.05
UBA4YHR111W YBR137WP38276 179 aa8.52□□□□□ -1.05
UBA4YHR111W LNP1P38878 278 aa8.52□□□□□ -1.05
UBA4YHR111W YER188WP40103 239 aa8.52□□□□□ -1.05
UBA4YHR111W UFD1P53044 361 aa8.52□□□□□ -1.05
UBA4YHR111W MRH4P53166 561 aa8.52□□□□□ -1.05
UBA4YHR111W UTP15Q04305 513 aaKnown RBP8.52□□□□□ -1.05
UBA4YHR111W RIM9Q04734 239 aa8.52□□□□□ -1.05
UBA4YHR111W MDM36Q06820 579 aa8.52□□□□□ -1.05
UBA4YHR111W RPS18AP0CX55 146 aaKnown RBP8.51□□□□□ -1.05
UBA4YHR111W RPS18BP0CX56 146 aaPredicted RBP8.51□□□□□ -1.05
UBA4YHR111W PET18P25362 215 aa8.51□□□□□ -1.05
UBA4YHR111W ARO4P32449 370 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms