RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	ODC2	Q99297	307 aa		3.93	□□□□□ -1.78
XKS1	YGR194C	TPI1	P00942	248 aa	Known RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	STE7	P06784	515 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	FUN14	P18411	198 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	VMA16	P23968	213 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	YCR101C	P25607	182 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	SNC2	P33328	115 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	SHG1	P38337	142 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	TRR2	P38816	342 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	MMF1	P40185	145 aa	Known RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	ICE2	P40499	491 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	HXT14	P42833	540 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	ADO1	P47143	340 aa	Known RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	COS12	P53053	380 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	YGL185C	P53100	379 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	CDH1	P53197	566 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	RNH70	P53331	553 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	MPA43	P53583	542 aa	Predicted RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	YIF1	P53845	314 aa	Known RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	ACT1	P60010	375 aa	Known RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	CTF19	Q02732	369 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	LEE1	Q02799	301 aa	Known RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	EST3	Q03096	181 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	CUE4	Q04201	117 aa	Predicted RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	YMR253C	Q04835	414 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	SNO4	Q04902	237 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	REX4	Q08237	289 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	HSP33	Q08914	237 aa	Known RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	MMT2	Q08970	484 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	HSP32	Q08992	237 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	ATX2	Q12067	313 aa		3.92	□□□□□ -1.78
XKS1	YGR194C	ERG27	Q12452	347 aa	Known RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	RPS21B	Q3E754	87 aa	Known RBP	3.92	□□□□□ -1.78
XKS1	YGR194C	CDC28	P00546	298 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	GAL4	P04386	881 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	RPL25	P04456	142 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	SPS4	P09937	338 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	DPM1	P14020	267 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	SEC62	P21825	274 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	MCK1	P21965	375 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	PDE1	P22434	369 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	ADK2	P26364	225 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	FUN19	P28003	413 aa	Predicted RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	CLB6	P32943	380 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	GMH1	P36125	273 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	EHT1	P38295	451 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	YPT31	P38555	223 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	YPT35	P38815	214 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	GGC1	P38988	300 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	GIM4	P40005	111 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	GPI14	P47088	403 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	SGF73	P53165	657 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	ALG12	P53730	551 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	APJ1	P53940	528 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	AIM6	Q07716	390 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	RTK1	Q12100	620 aa	Predicted RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	AHC1	Q12433	566 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	PNO1	Q99216	274 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	ADH7	P25377	361 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.91	□□□□□ -1.78	not detected
XKS1	YGR194C	MGM101	P32787	269 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	MDL1	P33310	695 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	GCS1	P35197	352 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	KKQ8	P36004	724 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	MRPL15	P36523	253 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	MAL32	P38158	584 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	RRN10	P38204	145 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	GPI16	P38875	610 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	MET30	P39014	640 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	YEL068C	P39977	110 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	SMB1	P40018	196 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	BTT1	P40314	149 aa	Predicted RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	YIL161W	P40449	235 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	FLX1	P40464	311 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	AVT7	P40501	490 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	RAD17	P48581	401 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	YAP1802	P53309	568 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	MAL12	P53341	584 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	SMX3	P54999	86 aa	Predicted RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	SKO1	Q02100	647 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	ADD37	Q03233	198 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	NDE2	Q07500	545 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	SRO7	Q12038	1033 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	SUT2	Q12286	268 aa		3.91	□□□□□ -1.78
XKS1	YGR194C	PAA1	Q12447	191 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	MEX67	Q99257	599 aa	Known RBP	3.91	□□□□□ -1.78
XKS1	YGR194C	STT4	P37297	1900 aa		3.9	□□□□□ -1.78
XKS1	YGR194C	URA6	P15700	204 aa		3.9	□□□□□ -1.79
XKS1	YGR194C	LAC1	P28496	418 aa		3.9	□□□□□ -1.79
XKS1	YGR194C	MRPL27	P36526	146 aa	Predicted RBP	3.9	□□□□□ -1.79
XKS1	YGR194C	YPC1	P38298	316 aa		3.9	□□□□□ -1.79
XKS1	YGR194C	SDS24	P38314	527 aa		3.9	□□□□□ -1.79
XKS1	YGR194C	PRP39	P39682	629 aa	Known RBP	3.9	□□□□□ -1.79
XKS1	YGR194C	YNL195C	P40168	261 aa		3.9	□□□□□ -1.79
XKS1	YGR194C	SYS1	P41544	203 aa		3.9	□□□□□ -1.79
XKS1	YGR194C	YFR020W	P43600	232 aa		3.9	□□□□□ -1.79
XKS1	YGR194C	SEH1	P53011	349 aa	Known RBP	3.9	□□□□□ -1.79
XKS1	YGR194C	ART5	P53244	586 aa	Known RBP	3.9	□□□□□ -1.79
XKS1	YGR194C	PRM1	P53835	661 aa		3.9	□□□□□ -1.79
XKS1	YGR194C	RSM10	Q03201	203 aa		3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 105.1 ms