RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C PRM4Q12498 284 aa6.43□□□□□ -1.38
NUP57YGR119C TDH1P00360 332 aaKnown RBP6.42□□□□□ -1.38
NUP57YGR119C GCV3P39726 170 aaPredicted RBP6.42□□□□□ -1.38
NUP57YGR119C YIL060WP40519 144 aa6.42□□□□□ -1.38
NUP57YGR119C SYS1P41544 203 aa6.42□□□□□ -1.38
NUP57YGR119C CCC1P47818 322 aa6.42□□□□□ -1.38
NUP57YGR119C SNN1P48232 102 aa6.42□□□□□ -1.38
NUP57YGR119C RSM27P53305 110 aa6.42□□□□□ -1.38
NUP57YGR119C OGG1P53397 376 aaPredicted RBP6.42□□□□□ -1.38
NUP57YGR119C ERV25P54837 211 aaKnown RBP6.42□□□□□ -1.38
NUP57YGR119C ODC1Q03028 310 aa6.42□□□□□ -1.38
NUP57YGR119C YPR172WQ06608 200 aa6.42□□□□□ -1.38
NUP57YGR119C GRC3Q07845 632 aa6.42□□□□□ -1.38
NUP57YGR119C SNU23Q12368 194 aaPredicted RBP6.42□□□□□ -1.38
NUP57YGR119C CET1O13297 549 aaPredicted RBP6.41□□□□□ -1.38
NUP57YGR119C PBN1P25580 416 aa6.41□□□□□ -1.38
NUP57YGR119C ECM25P32525 599 aa6.41□□□□□ -1.38
NUP57YGR119C FLO10P36170 1169 aa6.41□□□□□ -1.38
NUP57YGR119C YJR111CP47148 283 aaKnown RBP6.41□□□□□ -1.38
NUP57YGR119C NRK1P53915 240 aa6.41□□□□□ -1.38
NUP57YGR119C BUD25P85052 153 aa6.41□□□□□ -1.38
NUP57YGR119C DCS1Q06151 350 aa6.41□□□□□ -1.38
NUP57YGR119C DXO1Q06349 442 aa6.41□□□□□ -1.38
NUP57YGR119C VMA9Q3E7B6 73 aa6.41□□□□□ -1.38
NUP57YGR119C PPH21P23594 369 aa6.4□□□□□ -1.38
NUP57YGR119C PTP1P25044 335 aa6.4□□□□□ -1.38
NUP57YGR119C LDS1P31379 325 aa6.4□□□□□ -1.38
NUP57YGR119C RML2P32611 393 aa6.4□□□□□ -1.38
NUP57YGR119C MRPL27P36526 146 aaPredicted RBP6.4□□□□□ -1.38
NUP57YGR119C OKP1P53298 406 aa6.4□□□□□ -1.38
NUP57YGR119C HHO1P53551 258 aa6.4□□□□□ -1.38
NUP57YGR119C YNR061CP53747 219 aa6.4□□□□□ -1.38
NUP57YGR119C GIM3P53900 129 aa6.4□□□□□ -1.38
NUP57YGR119C CTF19Q02732 369 aa6.4□□□□□ -1.38
NUP57YGR119C YML053CQ04978 212 aa6.4□□□□□ -1.38
NUP57YGR119C MRPL51Q06090 140 aaPredicted RBP6.4□□□□□ -1.38
NUP57YGR119C HRT1Q08273 121 aa6.4□□□□□ -1.38
NUP57YGR119C RDR1Q08904 546 aa6.4□□□□□ -1.38
NUP57YGR119C YRM1Q12340 786 aa6.4□□□□□ -1.38
NUP57YGR119C ORT1Q12375 292 aa6.4□□□□□ -1.38
NUP57YGR119C YJR112W-AQ3E743 109 aa6.4□□□□□ -1.38
NUP57YGR119C RPL20AP0CX23 172 aaKnown RBP6.39□□□□□ -1.39
NUP57YGR119C RPL20BP0CX24 172 aaPredicted RBP6.39□□□□□ -1.39
NUP57YGR119C MATALPHA1P0CY06 175 aa6.39□□□□□ -1.39
NUP57YGR119C HMLALPHA1P0CY07 175 aa6.39□□□□□ -1.39
NUP57YGR119C NUP1P20676 1076 aa6.39□□□□□ -1.39
NUP57YGR119C PMT2P31382 759 aa6.39□□□□□ -1.39
NUP57YGR119C PAD1P33751 242 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
NUP57YGR119C ASP1P38986 381 aaPredicted RBP6.39□□□□□ -1.39
NUP57YGR119C PUG1P40100 303 aa6.39□□□□□ -1.39
NUP57YGR119C NAS2P40555 220 aa6.39□□□□□ -1.39
NUP57YGR119C CIN2P46670 268 aa6.39□□□□□ -1.39
NUP57YGR119C MPP6P53725 186 aaPredicted RBP6.39□□□□□ -1.39
NUP57YGR119C SNX41Q04053 625 aa6.39□□□□□ -1.39
NUP57YGR119C CAC2Q04199 468 aa6.39□□□□□ -1.39
NUP57YGR119C NOC4Q06512 552 aaPredicted RBP6.39□□□□□ -1.39
NUP57YGR119C TFC7Q12415 435 aa6.39□□□□□ -1.39
NUP57YGR119C RRI1Q12468 440 aa6.39□□□□□ -1.39
NUP57YGR119C ODC2Q99297 307 aa6.39□□□□□ -1.39
NUP57YGR119C ARO3P14843 370 aaKnown RBP6.39□□□□□ -1.39
NUP57YGR119C NRP1P32770 719 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
NUP57YGR119C TRS65P32893 560 aa6.39□□□□□ -1.39
NUP57YGR119C VAM7P32912 316 aa6.39□□□□□ -1.39
NUP57YGR119C SPT10P35208 640 aa6.39□□□□□ -1.39
NUP57YGR119C GPX1P36014 167 aa6.39□□□□□ -1.39
NUP57YGR119C PAN3P36102 679 aaPredicted RBP6.39□□□□□ -1.39
NUP57YGR119C MOH1P38191 138 aa6.39□□□□□ -1.39
NUP57YGR119C SDH8P38345 138 aa6.39□□□□□ -1.39
NUP57YGR119C BFR1P38934 470 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39 RIP-Chip
NUP57YGR119C YIL024CP40543 189 aa6.39□□□□□ -1.39
NUP57YGR119C YHC3P47040 408 aa6.39□□□□□ -1.39
NUP57YGR119C GPI14P47088 403 aaKnown RBP6.39□□□□□ -1.39
NUP57YGR119C MCM22P47167 239 aa6.39□□□□□ -1.39
NUP57YGR119C YIP4P53093 235 aa6.39□□□□□ -1.39
NUP57YGR119C TRS23Q03784 219 aa6.39□□□□□ -1.39
NUP57YGR119C MRX8Q05473 314 aa6.39□□□□□ -1.39
NUP57YGR119C HEM25Q07534 307 aa6.39□□□□□ -1.39
NUP57YGR119C SET6Q12529 373 aa6.39□□□□□ -1.39
NUP57YGR119C TFB5Q3E7C1 72 aaPredicted RBP6.39□□□□□ -1.39
NUP57YGR119C PCC1Q3E833 88 aa6.39□□□□□ -1.39
NUP57YGR119C ACC1Q00955 2233 aaKnown RBP6.38□□□□□ -1.39
NUP57YGR119C TIP1P27654 210 aaPredicted RBP6.38□□□□□ -1.39
NUP57YGR119C MSN4P33749 630 aa6.38□□□□□ -1.39
NUP57YGR119C YPC1P38298 316 aa6.38□□□□□ -1.39
NUP57YGR119C AVT7P40501 490 aa6.38□□□□□ -1.39
NUP57YGR119C NCE101Q02820 53 aa6.38□□□□□ -1.39
NUP57YGR119C MRPL1Q04599 285 aa6.38□□□□□ -1.39
NUP57YGR119C COQ10Q08058 207 aa6.38□□□□□ -1.39
NUP57YGR119C SSA3P09435 649 aaKnown RBP6.37□□□□□ -1.39
NUP57YGR119C URA6P15700 204 aa6.37□□□□□ -1.39
NUP57YGR119C CPR2P23285 205 aa6.37□□□□□ -1.39
NUP57YGR119C CPR4P25334 318 aa6.37□□□□□ -1.39
NUP57YGR119C FMT1P32785 401 aa6.37□□□□□ -1.39
NUP57YGR119C PPZ2P33329 710 aa6.37□□□□□ -1.39
NUP57YGR119C IKI1P38874 309 aa6.37□□□□□ -1.39
NUP57YGR119C BXI1P48558 297 aa6.37□□□□□ -1.39
NUP57YGR119C NIF3P53081 288 aa6.37□□□□□ -1.39
NUP57YGR119C YGL117WP53133 265 aa6.37□□□□□ -1.39
NUP57YGR119C SCW4P53334 386 aaKnown RBP6.37□□□□□ -1.39
NUP57YGR119C PEX25Q02969 394 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms