RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W MAG1P22134 296 aaKnown RBP5.34□□□□□ -1.55
RPN11YFR004W MSS1P32559 526 aaPredicted RBP5.34□□□□□ -1.55
RPN11YFR004W PAD1P33751 242 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
RPN11YFR004W SRY1P36007 326 aa5.34□□□□□ -1.55
RPN11YFR004W SDS24P38314 527 aa5.34□□□□□ -1.55
RPN11YFR004W MTC4P38335 694 aaKnown RBP5.34□□□□□ -1.55
RPN11YFR004W YER184CP39961 794 aa5.34□□□□□ -1.55
RPN11YFR004W NOP16P40007 231 aaKnown RBP5.34□□□□□ -1.55
RPN11YFR004W PUG1P40100 303 aa5.34□□□□□ -1.55
RPN11YFR004W HXT9P40885 567 aa5.34□□□□□ -1.55
RPN11YFR004W YFR054CP43622 192 aa5.34□□□□□ -1.55
RPN11YFR004W YJR141WP47172 347 aaPredicted RBP5.34□□□□□ -1.55
RPN11YFR004W RPN14P53196 417 aa5.34□□□□□ -1.55
RPN11YFR004W CWC25P53854 179 aaKnown RBP5.34□□□□□ -1.55
RPN11YFR004W ATG4P53867 494 aa5.34□□□□□ -1.55
RPN11YFR004W HXT11P54862 567 aa5.34□□□□□ -1.55
RPN11YFR004W YOS9Q99220 542 aa5.34□□□□□ -1.55
RPN11YFR004W YBR085C-AO43137 85 aa5.33□□□□□ -1.56
RPN11YFR004W RPS13P05756 151 aaKnown RBP5.33□□□□□ -1.56
RPN11YFR004W SGA1P08019 549 aa5.33□□□□□ -1.56
RPN11YFR004W RPL3P14126 387 aaKnown RBP5.33□□□□□ -1.56
RPN11YFR004W NUP1P20676 1076 aa5.33□□□□□ -1.56
RPN11YFR004W STP22P25604 385 aa5.33□□□□□ -1.56
RPN11YFR004W MRP17P28778 131 aa5.33□□□□□ -1.56
RPN11YFR004W MTC7P32633 139 aa5.33□□□□□ -1.56
RPN11YFR004W RPC34P32910 317 aa5.33□□□□□ -1.56
RPN11YFR004W MRPL36P36531 177 aa5.33□□□□□ -1.56
RPN11YFR004W NSG1P38837 291 aa5.33□□□□□ -1.56
RPN11YFR004W YHR180WP38868 163 aa5.33□□□□□ -1.56
RPN11YFR004W YIL060WP40519 144 aa5.33□□□□□ -1.56
RPN11YFR004W OTU1P43558 301 aa5.33□□□□□ -1.56
RPN11YFR004W YGL204CP53089 101 aa5.33□□□□□ -1.56
RPN11YFR004W POP6P53218 158 aa5.33□□□□□ -1.56
RPN11YFR004W EKI1Q03764 534 aa5.33□□□□□ -1.56
RPN11YFR004W MRX8Q05473 314 aa5.33□□□□□ -1.56
RPN11YFR004W HEM25Q07534 307 aa5.33□□□□□ -1.56
RPN11YFR004W COQ10Q08058 207 aa5.33□□□□□ -1.56
RPN11YFR004W ENB1Q08299 606 aa5.33□□□□□ -1.56
RPN11YFR004W SYC1Q08553 188 aaPredicted RBP5.33□□□□□ -1.56
RPN11YFR004W FEX2Q08991 375 aa5.33□□□□□ -1.56
RPN11YFR004W COX17Q12287 69 aa5.33□□□□□ -1.56
RPN11YFR004W PRP46Q12417 451 aaPredicted RBP5.33□□□□□ -1.56
RPN11YFR004W YOR032W-AQ8TGS1 66 aa5.33□□□□□ -1.56
RPN11YFR004W TDH2P00358 332 aaKnown RBP5.32□□□□□ -1.56
RPN11YFR004W STE18P18852 110 aa5.32□□□□□ -1.56
RPN11YFR004W YCR061WP25639 631 aa5.32□□□□□ -1.56
RPN11YFR004W SLC1P33333 303 aa5.32□□□□□ -1.56
RPN11YFR004W SPT10P35208 640 aa5.32□□□□□ -1.56
RPN11YFR004W GPX1P36014 167 aa5.32□□□□□ -1.56
RPN11YFR004W GRE3P38715 327 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
RPN11YFR004W YIP4P53093 235 aa5.32□□□□□ -1.56
RPN11YFR004W RSM27P53305 110 aa5.32□□□□□ -1.56
RPN11YFR004W YAP1802P53309 568 aa5.32□□□□□ -1.56
RPN11YFR004W PDR16P53860 351 aaKnown RBP5.32□□□□□ -1.56
RPN11YFR004W CTF19Q02732 369 aa5.32□□□□□ -1.56
RPN11YFR004W ATG21Q02887 496 aa5.32□□□□□ -1.56
RPN11YFR004W KAP120Q02932 1032 aa5.32□□□□□ -1.56
RPN11YFR004W RSM28Q03430 361 aa5.32□□□□□ -1.56
RPN11YFR004W MRPL51Q06090 140 aaPredicted RBP5.32□□□□□ -1.56
RPN11YFR004W YRA1Q12159 226 aaKnown RBP5.32□□□□□ -1.56
RPN11YFR004W ORT1Q12375 292 aa5.32□□□□□ -1.56
RPN11YFR004W PAR32Q12515 295 aaKnown RBP5.32□□□□□ -1.56
RPN11YFR004W ODC2Q99297 307 aa5.32□□□□□ -1.56
RPN11YFR004W FSH3Q99369 266 aa5.32□□□□□ -1.56
RPN11YFR004W PPA2P28239 310 aa5.31□□□□□ -1.56
RPN11YFR004W HSP150P32478 413 aa5.31□□□□□ -1.56
RPN11YFR004W TRS65P32893 560 aa5.31□□□□□ -1.56
RPN11YFR004W PET100P38958 111 aa5.31□□□□□ -1.56
RPN11YFR004W YJL193WP39542 402 aa5.31□□□□□ -1.56
RPN11YFR004W YMR144WP40214 342 aaKnown RBP5.31□□□□□ -1.56
RPN11YFR004W SNO3P43544 222 aa5.31□□□□□ -1.56
RPN11YFR004W GPI14P47088 403 aaKnown RBP5.31□□□□□ -1.56
RPN11YFR004W HAM1P47119 197 aaKnown RBP5.31□□□□□ -1.56
RPN11YFR004W CCC1P47818 322 aa5.31□□□□□ -1.56
RPN11YFR004W UBC12P52491 188 aa5.31□□□□□ -1.56
RPN11YFR004W SEH1P53011 349 aaKnown RBP5.31□□□□□ -1.56
RPN11YFR004W OKP1P53298 406 aa5.31□□□□□ -1.56
RPN11YFR004W MPP6P53725 186 aaPredicted RBP5.31□□□□□ -1.56
RPN11YFR004W INN1P53901 409 aa5.31□□□□□ -1.56
RPN11YFR004W TIM44Q01852 431 aa5.31□□□□□ -1.56
RPN11YFR004W PET191Q02772 108 aa5.31□□□□□ -1.56
RPN11YFR004W PAL1Q05518 499 aaKnown RBP5.31□□□□□ -1.56
RPN11YFR004W SEI1Q06058 285 aa5.31□□□□□ -1.56
RPN11YFR004W LUC7Q07508 261 aaPredicted RBP5.31□□□□□ -1.56
RPN11YFR004W AEP3Q12089 606 aa5.31□□□□□ -1.56
RPN11YFR004W MCP1Q12106 302 aa5.31□□□□□ -1.56
RPN11YFR004W RLM1Q12224 676 aa5.31□□□□□ -1.56
RPN11YFR004W TRM13Q12383 476 aa5.31□□□□□ -1.56
RPN11YFR004W YJR112W-AQ3E743 109 aa5.31□□□□□ -1.56
RPN11YFR004W OPI3P05375 206 aa5.3□□□□□ -1.56
RPN11YFR004W ARF1P11076 181 aaKnown RBP5.3□□□□□ -1.56
RPN11YFR004W STE50P25344 346 aa5.3□□□□□ -1.56
RPN11YFR004W CWH43P25618 953 aa5.3□□□□□ -1.56
RPN11YFR004W MRP20P32387 263 aa5.3□□□□□ -1.56
RPN11YFR004W SUA5P32579 426 aa5.3□□□□□ -1.56
RPN11YFR004W EMP70P32802 667 aa5.3□□□□□ -1.56
RPN11YFR004W PAN3P36102 679 aaPredicted RBP5.3□□□□□ -1.56
RPN11YFR004W SMB1P40018 196 aaKnown RBP5.3□□□□□ -1.56
RPN11YFR004W SWM2P40342 146 aa5.3□□□□□ -1.56
RPN11YFR004W CIN2P46670 268 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 1186.6 ms