RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C SEF1P34228 1148 aa5.76□□□□□ -1.49
YPT1YFL038C YHC3P47040 408 aa5.76□□□□□ -1.49
YPT1YFL038C SNN1P48232 102 aa5.76□□□□□ -1.49
YPT1YFL038C BUL1P48524 976 aa5.76□□□□□ -1.49
YPT1YFL038C PNC1P53184 216 aaKnown RBP5.76□□□□□ -1.49
YPT1YFL038C YGR126WP53274 230 aa5.76□□□□□ -1.49
YPT1YFL038C PDR16P53860 351 aaKnown RBP5.76□□□□□ -1.49
YPT1YFL038C YVH1Q02256 364 aaKnown RBP5.76□□□□□ -1.49
YPT1YFL038C YML018CQ03730 393 aa5.76□□□□□ -1.49
YPT1YFL038C FRE7Q12333 620 aa5.76□□□□□ -1.49
YPT1YFL038C HMS1Q12398 434 aa5.76□□□□□ -1.49
YPT1YFL038C CYR1P08678 2026 aaKnown RBP5.75□□□□□ -1.49
YPT1YFL038C TIP1P27654 210 aaPredicted RBP5.75□□□□□ -1.49
YPT1YFL038C ISC10P32645 267 aa5.75□□□□□ -1.49
YPT1YFL038C KAE1P36132 386 aa5.75□□□□□ -1.49
YPT1YFL038C POP8P38208 133 aa5.75□□□□□ -1.49
YPT1YFL038C LAG1P38703 411 aa5.75□□□□□ -1.49
YPT1YFL038C LNP1P38878 278 aa5.75□□□□□ -1.49
YPT1YFL038C YIL024CP40543 189 aa5.75□□□□□ -1.49
YPT1YFL038C CAF40P53829 373 aa5.75□□□□□ -1.49
YPT1YFL038C RNH201P53942 307 aa5.75□□□□□ -1.49
YPT1YFL038C YDR248CQ03786 193 aa5.75□□□□□ -1.49
YPT1YFL038C YDL129WQ07555 291 aa5.75□□□□□ -1.49
YPT1YFL038C RDL2Q08742 149 aaKnown RBP5.75□□□□□ -1.49
YPT1YFL038C SCP1Q08873 200 aa5.75□□□□□ -1.49
YPT1YFL038C NIP7Q08962 181 aaKnown RBP5.75□□□□□ -1.49
YPT1YFL038C YJR112W-AQ3E743 109 aa5.75□□□□□ -1.49
YPT1YFL038C YAL064W-BO13512 126 aa5.74□□□□□ -1.49
YPT1YFL038C NAM2P11325 894 aa5.74□□□□□ -1.49
YPT1YFL038C CDC26P14724 124 aa5.74□□□□□ -1.49
YPT1YFL038C ZRC1P20107 442 aa5.74□□□□□ -1.49
YPT1YFL038C RFA1P22336 621 aaKnown RBP5.74□□□□□ -1.49
YPT1YFL038C ERG3P32353 365 aa5.74□□□□□ -1.49
YPT1YFL038C ECM31P38122 312 aa5.74□□□□□ -1.49
YPT1YFL038C RPL13BP40212 199 aaKnown RBP5.74□□□□□ -1.49
YPT1YFL038C YIR035CP40579 254 aa5.74□□□□□ -1.49
YPT1YFL038C SKP1P52286 194 aa5.74□□□□□ -1.49
YPT1YFL038C YGL117WP53133 265 aa5.74□□□□□ -1.49
YPT1YFL038C HHO1P53551 258 aa5.74□□□□□ -1.49
YPT1YFL038C ACT1P60010 375 aaKnown RBP5.74□□□□□ -1.49
YPT1YFL038C YPL039WQ03080 316 aa5.74□□□□□ -1.49
YPT1YFL038C NRG1Q03125 231 aa5.74□□□□□ -1.49
YPT1YFL038C CAB5Q03941 241 aa5.74□□□□□ -1.49
YPT1YFL038C RTT103Q05543 409 aa5.74□□□□□ -1.49
YPT1YFL038C CTS2Q06350 511 aa5.74□□□□□ -1.49
YPT1YFL038C BER1Q06688 274 aaKnown RBP5.74□□□□□ -1.49
YPT1YFL038C SDO1Q07953 250 aaKnown RBP5.74□□□□□ -1.49
YPT1YFL038C VAM3Q12241 283 aa5.74□□□□□ -1.49
YPT1YFL038C SWM1Q12379 170 aa5.74□□□□□ -1.49
YPT1YFL038C ISA2Q12425 185 aa5.74□□□□□ -1.49
YPT1YFL038C TY1A-DR3Q12441 440 aa5.74□□□□□ -1.49
YPT1YFL038C RPL13AQ12690 199 aaPredicted RBP5.74□□□□□ -1.49
YPT1YFL038C YIL046W-AQ3E7Z4 54 aa5.74□□□□□ -1.49
YPT1YFL038C HBN1Q96VH4 193 aa5.74□□□□□ -1.49
YPT1YFL038C COX1P00401 534 aa5.73□□□□□ -1.49
YPT1YFL038C RPS31P05759 152 aaKnown RBP5.73□□□□□ -1.49
YPT1YFL038C QCR2P07257 368 aa5.73□□□□□ -1.49
YPT1YFL038C UBI4P0CG63 381 aaKnown RBP5.73□□□□□ -1.49
YPT1YFL038C RPL40AP0CH08 128 aaKnown RBP5.73□□□□□ -1.49
YPT1YFL038C RPL40BP0CH09 128 aaKnown RBP5.73□□□□□ -1.49
YPT1YFL038C SPO7P18410 259 aa5.73□□□□□ -1.49
YPT1YFL038C VAM7P32912 316 aa5.73□□□□□ -1.49
YPT1YFL038C YKL162CP36052 402 aa5.73□□□□□ -1.49
YPT1YFL038C UTH1P36135 365 aa5.73□□□□□ -1.49
YPT1YFL038C YHR210CP38893 341 aa5.73□□□□□ -1.49
YPT1YFL038C YER010CP40011 234 aa5.73□□□□□ -1.49
YPT1YFL038C ASK10P48361 1146 aa5.73□□□□□ -1.49
YPT1YFL038C HSV2P50079 448 aaPredicted RBP5.73□□□□□ -1.49
YPT1YFL038C UBP8P50102 471 aa5.73□□□□□ -1.49
YPT1YFL038C EST3Q03096 181 aa5.73□□□□□ -1.49
YPT1YFL038C HAS1Q03532 505 aaKnown RBP5.73□□□□□ -1.49
YPT1YFL038C BDS1Q08347 646 aa5.73□□□□□ -1.49
YPT1YFL038C VMA9Q3E7B6 73 aa5.73□□□□□ -1.49
YPT1YFL038C PCC1Q3E833 88 aa5.73□□□□□ -1.49
YPT1YFL038C YHR214C-EQ8TGK0 99 aa5.73□□□□□ -1.49
YPT1YFL038C FAS1P07149 2051 aaKnown RBP5.72□□□□□ -1.49
YPT1YFL038C YMR084WA2P2R3 262 aa5.72□□□□□ -1.49
YPT1YFL038C GAL1P04385 528 aa5.72□□□□□ -1.49
YPT1YFL038C CDC36P06100 191 aaPredicted RBP5.72□□□□□ -1.49
YPT1YFL038C MIR1P23641 311 aaKnown RBP5.72□□□□□ -1.49
YPT1YFL038C AFG1P32317 509 aa5.72□□□□□ -1.49
YPT1YFL038C COS9P36034 407 aa5.72□□□□□ -1.49
YPT1YFL038C IKI1P38874 309 aa5.72□□□□□ -1.49
YPT1YFL038C GPI16P38875 610 aa5.72□□□□□ -1.49
YPT1YFL038C CAF16P43569 289 aa5.72□□□□□ -1.49
YPT1YFL038C MCM22P47167 239 aa5.72□□□□□ -1.49
YPT1YFL038C PGU1P47180 361 aa5.72□□□□□ -1.49
YPT1YFL038C BSC5P53755 489 aa5.72□□□□□ -1.49
YPT1YFL038C ALG9P53868 555 aaKnown RBP5.72□□□□□ -1.49
YPT1YFL038C FMP41P53889 259 aaKnown RBP5.72□□□□□ -1.49
YPT1YFL038C HHT1P61830 136 aa5.72□□□□□ -1.49
YPT1YFL038C YCL001W-AP87012 153 aa5.72□□□□□ -1.49
YPT1YFL038C RRT7Q07829 113 aa5.72□□□□□ -1.49
YPT1YFL038C YCT1Q12235 531 aa5.72□□□□□ -1.49
YPT1YFL038C YLR146W-AQ2V2P1 62 aa5.72□□□□□ -1.49
YPT1YFL038C Q0142Q9ZZW4 58 aa5.72□□□□□ -1.49
YPT1YFL038C YHR214C-DP0CX93 97 aa5.71□□□□□ -1.5
YPT1YFL038C AGA2P32781 87 aa5.71□□□□□ -1.5
YPT1YFL038C YBL010CP32788 280 aa5.71□□□□□ -1.5
YPT1YFL038C OM14P38325 134 aa5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms