RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C RRP40Q08285 240 aaKnown RBP3.26□□□□□ -1.89
SPB4YFL002C WTM1Q12363 437 aaKnown RBP3.26□□□□□ -1.89
SPB4YFL002C PSK1P31374 1356 aa3.25□□□□□ -1.89
SPB4YFL002C URA6P15700 204 aa3.25□□□□□ -1.89
SPB4YFL002C PHO80P20052 293 aa3.25□□□□□ -1.89
SPB4YFL002C AST1P35183 429 aa3.25□□□□□ -1.89
SPB4YFL002C VPS51P36116 164 aa3.25□□□□□ -1.89
SPB4YFL002C SWD3P38123 315 aa3.25□□□□□ -1.89
SPB4YFL002C GPI18P38211 433 aa3.25□□□□□ -1.89
SPB4YFL002C YMR144WP40214 342 aaKnown RBP3.25□□□□□ -1.89
SPB4YFL002C YPI1P43587 155 aa3.25□□□□□ -1.89
SPB4YFL002C TIR4Q12218 487 aaPredicted RBP3.25□□□□□ -1.89
SPB4YFL002C HRT3Q12347 344 aa3.25□□□□□ -1.89
SPB4YFL002C RPL35AP0CX84 120 aaKnown RBP3.24□□□□□ -1.89
SPB4YFL002C RPL35BP0CX85 120 aaKnown RBP3.24□□□□□ -1.89
SPB4YFL002C ZRT3P34240 503 aa3.24□□□□□ -1.89
SPB4YFL002C SMP1P38128 452 aa3.24□□□□□ -1.89
SPB4YFL002C PHO89P38361 574 aa3.24□□□□□ -1.89
SPB4YFL002C YHI9P38765 294 aa3.24□□□□□ -1.89
SPB4YFL002C TOS8P53147 276 aa3.24□□□□□ -1.89
SPB4YFL002C IMP4P53941 290 aaKnown RBP3.24□□□□□ -1.89
SPB4YFL002C ACT1P60010 375 aaKnown RBP3.24□□□□□ -1.89
SPB4YFL002C YOR186WQ08560 144 aa3.24□□□□□ -1.89
SPB4YFL002C RAX2Q12465 1220 aa3.24□□□□□ -1.89
SPB4YFL002C COS2P0CX12 379 aa3.23□□□□□ -1.89
SPB4YFL002C COS3P0CX13 379 aa3.23□□□□□ -1.89
SPB4YFL002C SRY1P36007 326 aa3.23□□□□□ -1.89
SPB4YFL002C YCR087C-AP37263 153 aa3.23□□□□□ -1.89
SPB4YFL002C EDC2P40023 145 aaPredicted RBP3.23□□□□□ -1.89
SPB4YFL002C AVT6P40074 448 aa3.23□□□□□ -1.89
SPB4YFL002C COS4P43542 379 aa3.23□□□□□ -1.89
SPB4YFL002C PDR17P53844 350 aa3.23□□□□□ -1.89
SPB4YFL002C SYC1Q08553 188 aaPredicted RBP3.23□□□□□ -1.89
SPB4YFL002C COX4P04037 155 aa3.23□□□□□ -1.89
SPB4YFL002C SNF6P18888 332 aa3.23□□□□□ -1.89
SPB4YFL002C ISY1P21374 235 aaPredicted RBP3.23□□□□□ -1.89
SPB4YFL002C EPT1P22140 391 aa3.23□□□□□ -1.89
SPB4YFL002C ERG2P32352 222 aa3.23□□□□□ -1.89
SPB4YFL002C YNL046WP53956 172 aa3.23□□□□□ -1.89
SPB4YFL002C PAL1Q05518 499 aaKnown RBP3.23□□□□□ -1.89
SPB4YFL002C TLG2Q08144 397 aa3.23□□□□□ -1.89
SPB4YFL002C YOL029CQ08187 201 aa3.23□□□□□ -1.89
SPB4YFL002C GRE1Q08969 168 aa3.23□□□□□ -1.89
SPB4YFL002C MRX4Q12467 430 aa3.23□□□□□ -1.89
SPB4YFL002C DFM1Q12743 341 aaKnown RBP3.23□□□□□ -1.89
SPB4YFL002C ERD2P18414 219 aa3.22□□□□□ -1.89
SPB4YFL002C YIL054WP40524 105 aa3.22□□□□□ -1.89
SPB4YFL002C YGL118CP53132 145 aa3.22□□□□□ -1.89
SPB4YFL002C SYF2P53277 215 aaPredicted RBP3.22□□□□□ -1.89
SPB4YFL002C YDR124WQ04608 324 aa3.22□□□□□ -1.89
SPB4YFL002C ECM19Q06011 112 aa3.22□□□□□ -1.89
SPB4YFL002C YPL229WQ99395 206 aa3.22□□□□□ -1.89
SPB4YFL002C MET2P08465 486 aa3.21□□□□□ -1.89
SPB4YFL002C FBA1P14540 359 aaKnown RBP3.21□□□□□ -1.89
SPB4YFL002C CSG2P35206 410 aa3.21□□□□□ -1.89
SPB4YFL002C GRE3P38715 327 aaKnown RBP RIP-Chip data3.21□□□□□ -1.89not detected
SPB4YFL002C ASP1P38986 381 aaPredicted RBP3.21□□□□□ -1.89
SPB4YFL002C RRT13P40042 185 aa3.21□□□□□ -1.89
SPB4YFL002C POG1P40473 351 aa3.21□□□□□ -1.89
SPB4YFL002C YJR141WP47172 347 aaPredicted RBP3.21□□□□□ -1.89
SPB4YFL002C PGU1P47180 361 aa3.21□□□□□ -1.89
SPB4YFL002C GOT1Q03554 138 aa3.21□□□□□ -1.89
SPB4YFL002C COX5AP00424 153 aa3.21□□□□□ -1.9
SPB4YFL002C DBF2P22204 572 aa3.21□□□□□ -1.9
SPB4YFL002C MRPL27P36526 146 aaPredicted RBP3.21□□□□□ -1.9
SPB4YFL002C SYS1P41544 203 aa3.21□□□□□ -1.9
SPB4YFL002C MMS2P53152 137 aa3.21□□□□□ -1.9
SPB4YFL002C YGL034CP53186 121 aa3.21□□□□□ -1.9
SPB4YFL002C SWT21P53873 357 aaPredicted RBP3.21□□□□□ -1.9
SPB4YFL002C YBL008W-AQ3E821 79 aa3.21□□□□□ -1.9
SPB4YFL002C YAL067W-AQ8TGK6 75 aa3.21□□□□□ -1.9
SPB4YFL002C CDC28P00546 298 aaKnown RBP3.2□□□□□ -1.9
SPB4YFL002C SPS18P32572 300 aa3.2□□□□□ -1.9
SPB4YFL002C ARN2P38724 620 aa3.2□□□□□ -1.9
SPB4YFL002C BXI1P48558 297 aa3.2□□□□□ -1.9
SPB4YFL002C YGL159WP53110 370 aa3.2□□□□□ -1.9
SPB4YFL002C YET3Q07451 203 aa3.2□□□□□ -1.9
SPB4YFL002C YPS3Q12303 508 aa3.2□□□□□ -1.9
SPB4YFL002C ATG5Q12380 294 aa3.2□□□□□ -1.9
SPB4YFL002C GCN3P14741 305 aa3.19□□□□□ -1.9
SPB4YFL002C RPE1P46969 238 aa3.19□□□□□ -1.9
SPB4YFL002C YJL016WP47072 561 aa3.19□□□□□ -1.9
SPB4YFL002C YGL262WP53054 175 aa3.19□□□□□ -1.9
SPB4YFL002C YIP3P53633 176 aa3.19□□□□□ -1.9
SPB4YFL002C PRM15Q03262 622 aa3.19□□□□□ -1.9
SPB4YFL002C YMR279CQ03263 540 aa3.19□□□□□ -1.9
SPB4YFL002C NNT1Q05874 261 aa3.19□□□□□ -1.9
SPB4YFL002C YNG1Q08465 219 aa3.19□□□□□ -1.9
SPB4YFL002C YPL150WQ12152 901 aa3.19□□□□□ -1.9
SPB4YFL002C YOL085CQ99345 113 aa3.19□□□□□ -1.9
SPB4YFL002C YOL163WP0CF20 169 aa3.19□□□□□ -1.9
SPB4YFL002C RPB9P27999 122 aa3.19□□□□□ -1.9
SPB4YFL002C MRPL28P36527 147 aa3.19□□□□□ -1.9
SPB4YFL002C SHG1P38337 142 aa3.19□□□□□ -1.9
SPB4YFL002C ECM34P38728 170 aa3.19□□□□□ -1.9
SPB4YFL002C SUR2P38992 349 aa3.19□□□□□ -1.9
SPB4YFL002C COG3P40094 801 aa3.19□□□□□ -1.9
SPB4YFL002C MRPS16Q02608 121 aa3.19□□□□□ -1.9
SPB4YFL002C MSA1Q08471 629 aa3.19□□□□□ -1.9
SPB4YFL002C YAK1P14680 807 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms