RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W YLR460CP54007 376 aa1.14□□□□□ -2.23
MSN5YDR335W YDR278CQ05612 105 aa1.14□□□□□ -2.23
MSN5YDR335W YDL009CQ12210 107 aa1.14□□□□□ -2.23
MSN5YDR335W DCN1Q12395 269 aa1.14□□□□□ -2.23
MSN5YDR335W PIS1P06197 220 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W YOL163WP0CF20 169 aa1.14□□□□□ -2.23
MSN5YDR335W DPM1P14020 267 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W MDM10P18409 493 aa1.14□□□□□ -2.23
MSN5YDR335W TIP1P27654 210 aaPredicted RBP1.14□□□□□ -2.23
MSN5YDR335W OAR1P35731 278 aa1.14□□□□□ -2.23
MSN5YDR335W MRPL3P36516 390 aa1.14□□□□□ -2.23
MSN5YDR335W ARN1P38731 627 aa1.14□□□□□ -2.23
MSN5YDR335W PET8P38921 284 aa1.14□□□□□ -2.23
MSN5YDR335W DHH1P39517 506 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W SEN34P39707 275 aa1.14□□□□□ -2.23
MSN5YDR335W PDS1P40316 373 aaPredicted RBP1.14□□□□□ -2.23
MSN5YDR335W YJL213WP40896 331 aa1.14□□□□□ -2.23
MSN5YDR335W CDC40P40968 455 aaPredicted RBP1.14□□□□□ -2.23
MSN5YDR335W YCH1P42937 148 aa1.14□□□□□ -2.23
MSN5YDR335W YJR079WP47126 109 aa1.14□□□□□ -2.23
MSN5YDR335W BXI1P48558 297 aa1.14□□□□□ -2.23
MSN5YDR335W NBP35P52920 328 aa1.14□□□□□ -2.23
MSN5YDR335W IMP4P53941 290 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W NUP100Q02629 959 aa1.14□□□□□ -2.23
MSN5YDR335W DIG1Q03063 452 aaKnown RBP1.14□□□□□ -2.23
MSN5YDR335W RSC9Q03124 581 aa1.14□□□□□ -2.23
MSN5YDR335W SWF1Q04629 336 aa1.14□□□□□ -2.23
MSN5YDR335W PEX30Q06169 523 aa1.14□□□□□ -2.23
MSN5YDR335W YPR127WQ06494 345 aa1.14□□□□□ -2.23
MSN5YDR335W MHR1Q06630 226 aa1.14□□□□□ -2.23
MSN5YDR335W HNT3Q08702 217 aa1.14□□□□□ -2.23
MSN5YDR335W SRL2Q12020 392 aa1.14□□□□□ -2.23
MSN5YDR335W PCL9Q12477 304 aa1.14□□□□□ -2.23
MSN5YDR335W SIR2P06700 562 aa1.13□□□□□ -2.23
MSN5YDR335W MET2P08465 486 aa1.13□□□□□ -2.23
MSN5YDR335W RPL35AP0CX84 120 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W RPL35BP0CX85 120 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W URA6P15700 204 aa1.13□□□□□ -2.23
MSN5YDR335W ATG22P25568 528 aa1.13□□□□□ -2.23
MSN5YDR335W HSP30P25619 332 aa1.13□□□□□ -2.23
MSN5YDR335W RCK2P38623 610 aa1.13□□□□□ -2.23
MSN5YDR335W YMR134WP40207 237 aa1.13□□□□□ -2.23
MSN5YDR335W CFD1P40558 293 aa1.13□□□□□ -2.23
MSN5YDR335W GWT1P47026 490 aa1.13□□□□□ -2.23
MSN5YDR335W SMX3P54999 86 aaPredicted RBP1.13□□□□□ -2.23
MSN5YDR335W RHO4Q00246 291 aa1.13□□□□□ -2.23
MSN5YDR335W CTL1Q03220 320 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W DXO1Q06349 442 aa1.13□□□□□ -2.23
MSN5YDR335W RSA1Q08932 381 aa1.13□□□□□ -2.23
MSN5YDR335W BCY1P07278 416 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W TUB1P09733 447 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W YKR104WP0CE69 306 aa1.13□□□□□ -2.23
MSN5YDR335W YCR102CP25608 368 aa1.13□□□□□ -2.23
MSN5YDR335W URA10P30402 227 aa1.13□□□□□ -2.23
MSN5YDR335W TPS2P31688 896 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W YBR062CP38239 180 aa1.13□□□□□ -2.23
MSN5YDR335W ARC40P38328 384 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W RMD6P39975 231 aa1.13□□□□□ -2.23
MSN5YDR335W YAR1P46683 200 aa1.13□□□□□ -2.23
MSN5YDR335W RPC17P47076 161 aa1.13□□□□□ -2.23
MSN5YDR335W NQM1P53228 333 aaPredicted RBP1.13□□□□□ -2.23
MSN5YDR335W VHT1P53241 593 aa1.13□□□□□ -2.23
MSN5YDR335W SUE1Q06524 206 aa1.13□□□□□ -2.23
MSN5YDR335W RRP40Q08285 240 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W NOT5Q12514 560 aaPredicted RBP1.13□□□□□ -2.23
MSN5YDR335W COS2P0CX12 379 aa1.13□□□□□ -2.23
MSN5YDR335W COS3P0CX13 379 aa1.13□□□□□ -2.23
MSN5YDR335W FAR1P21268 830 aa1.13□□□□□ -2.23
MSN5YDR335W COQ3P27680 312 aa1.13□□□□□ -2.23
MSN5YDR335W OCH1P31755 480 aa1.13□□□□□ -2.23
MSN5YDR335W PTM1P32857 523 aa1.13□□□□□ -2.23
MSN5YDR335W VAM7P32912 316 aa1.13□□□□□ -2.23
MSN5YDR335W SHC1P39000 512 aa1.13□□□□□ -2.23
MSN5YDR335W PHO90P39535 881 aa1.13□□□□□ -2.23
MSN5YDR335W MST28P39552 234 aa1.13□□□□□ -2.23
MSN5YDR335W AST2P39945 430 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W COG3P40094 801 aa1.13□□□□□ -2.23
MSN5YDR335W EGT2P42835 1041 aa1.13□□□□□ -2.23
MSN5YDR335W COS4P43542 379 aa1.13□□□□□ -2.23
MSN5YDR335W YJR015WP47090 510 aa1.13□□□□□ -2.23
MSN5YDR335W MGA1P53050 456 aa1.13□□□□□ -2.23
MSN5YDR335W TAF9Q05027 157 aa1.13□□□□□ -2.23
MSN5YDR335W BCH1Q05029 724 aa1.13□□□□□ -2.23
MSN5YDR335W RDL2Q08742 149 aaKnown RBP1.13□□□□□ -2.23
MSN5YDR335W YPL264CQ08980 353 aa1.13□□□□□ -2.23
MSN5YDR335W FCY22Q12119 530 aa1.13□□□□□ -2.23
MSN5YDR335W BI3Q9ZZW7 517 aa1.13□□□□□ -2.23
MSN5YDR335W RPL23AP0CX41 137 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W RPL23BP0CX42 137 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W GCN3P14741 305 aa1.12□□□□□ -2.23
MSN5YDR335W CLB2P24869 491 aa1.12□□□□□ -2.23
MSN5YDR335W TCA17P32613 152 aa1.12□□□□□ -2.23
MSN5YDR335W PRX1P34227 261 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W CSM2P40465 213 aa1.12□□□□□ -2.23
MSN5YDR335W RTS2P40962 232 aa1.12□□□□□ -2.23
MSN5YDR335W TMA22P47089 198 aaPredicted RBP1.12□□□□□ -2.23
MSN5YDR335W SCS3P53012 380 aa1.12□□□□□ -2.23
MSN5YDR335W FLC3P53121 802 aa1.12□□□□□ -2.23
MSN5YDR335W YNR048WP53740 393 aa1.12□□□□□ -2.23
MSN5YDR335W YNR066CP53752 436 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 289.5 ms