RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C APC9Q12107 265 aa2.1□□□□□ -2.07
UBX3YDL091C TRM10Q12400 293 aa2.1□□□□□ -2.07
UBX3YDL091C DFM1Q12743 341 aaKnown RBP2.1□□□□□ -2.07
UBX3YDL091C YCL001W-BQ96VH2 84 aa2.1□□□□□ -2.07
UBX3YDL091C DNA2P38859 1522 aa2.1□□□□□ -2.07
UBX3YDL091C LYS2P07702 1392 aa2.1□□□□□ -2.07
UBX3YDL091C RPO41P13433 1351 aaKnown RBP2.1□□□□□ -2.07
UBX3YDL091C SAL1D6W196 494 aa2.1□□□□□ -2.07
UBX3YDL091C YPR096CO13587 100 aa2.1□□□□□ -2.07
UBX3YDL091C RPL31AP0C2H8 113 aaKnown RBP2.1□□□□□ -2.07
UBX3YDL091C NHP6AP11632 93 aaKnown RBP2.1□□□□□ -2.07
UBX3YDL091C STF2P16965 84 aa2.1□□□□□ -2.07
UBX3YDL091C CAM1P29547 415 aaKnown RBP2.1□□□□□ -2.07
UBX3YDL091C CDC13P32797 924 aaKnown RBP2.1□□□□□ -2.07
UBX3YDL091C VPS21P36017 210 aaKnown RBP2.1□□□□□ -2.07
UBX3YDL091C TPO5P36029 618 aa2.1□□□□□ -2.07
UBX3YDL091C HMT1P38074 348 aa2.1□□□□□ -2.07
UBX3YDL091C ECM31P38122 312 aa2.1□□□□□ -2.07
UBX3YDL091C MAL32P38158 584 aa2.1□□□□□ -2.07
UBX3YDL091C HEK2P38199 381 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
UBX3YDL091C EGD2P38879 174 aaKnown RBP2.1□□□□□ -2.07
UBX3YDL091C PET8P38921 284 aa2.1□□□□□ -2.07
UBX3YDL091C AIM2P39721 246 aa2.1□□□□□ -2.07
UBX3YDL091C SEC72P39742 193 aaKnown RBP2.1□□□□□ -2.07
UBX3YDL091C KRE29P40026 464 aa2.1□□□□□ -2.07
UBX3YDL091C RTR1P40084 226 aaPredicted RBP2.1□□□□□ -2.07
UBX3YDL091C DDI1P40087 428 aa2.1□□□□□ -2.07
UBX3YDL091C MAL12P53341 584 aa2.1□□□□□ -2.07
UBX3YDL091C RCF2P53721 224 aa2.1□□□□□ -2.07
UBX3YDL091C PET117Q02771 107 aa2.1□□□□□ -2.07
UBX3YDL091C YMR209CQ03648 457 aa2.1□□□□□ -2.07
UBX3YDL091C BNA7Q04066 261 aa2.1□□□□□ -2.07
UBX3YDL091C ECM18Q04623 453 aa2.1□□□□□ -2.07
UBX3YDL091C BOP2Q06150 570 aa2.1□□□□□ -2.07
UBX3YDL091C YPR127WQ06494 345 aa2.1□□□□□ -2.07
UBX3YDL091C YOR292CQ08743 309 aa2.1□□□□□ -2.07
UBX3YDL091C GET4Q12125 312 aa2.1□□□□□ -2.07
UBX3YDL091C MRPL23Q12487 163 aaPredicted RBP2.1□□□□□ -2.07
UBX3YDL091C TY2B-LR1P0C2J3 1770 aa2.09□□□□□ -2.07
UBX3YDL091C TY2B-FP0CX63 1770 aa2.09□□□□□ -2.07
UBX3YDL091C TY2B-GR2P0CX64 1770 aa2.09□□□□□ -2.07
UBX3YDL091C TY2B-CP25384 1770 aa2.09□□□□□ -2.07
UBX3YDL091C TY2B-DR2Q03494 1770 aa2.09□□□□□ -2.07
UBX3YDL091C TY1B-DR1Q03855 1755 aa2.09□□□□□ -2.07
UBX3YDL091C TY2B-DR3Q07791 1770 aaKnown RBP2.09□□□□□ -2.07
UBX3YDL091C TY2B-OR1Q12113 1770 aa2.09□□□□□ -2.07
UBX3YDL091C TY2B-DR1Q12472 1770 aa2.09□□□□□ -2.07
UBX3YDL091C TY2B-BQ12491 1770 aa2.09□□□□□ -2.07
UBX3YDL091C TY2B-OR2Q12501 1770 aa2.09□□□□□ -2.07
UBX3YDL091C TY1B-DR3Q99231 1755 aa2.09□□□□□ -2.07
UBX3YDL091C SIR4P11978 1358 aa2.09□□□□□ -2.07
UBX3YDL091C YGL041W-AP0C5N3 154 aa2.09□□□□□ -2.08
UBX3YDL091C RPS23AP0CX29 145 aaKnown RBP2.09□□□□□ -2.08
UBX3YDL091C RPS23BP0CX30 145 aa2.09□□□□□ -2.08
UBX3YDL091C MATALPHA1P0CY06 175 aa2.09□□□□□ -2.08
UBX3YDL091C HMLALPHA1P0CY07 175 aa2.09□□□□□ -2.08
UBX3YDL091C RPL4AP10664 362 aaKnown RBP2.09□□□□□ -2.08
UBX3YDL091C TCP1P12612 559 aaKnown RBP2.09□□□□□ -2.08
UBX3YDL091C CBF1P17106 351 aa2.09□□□□□ -2.08
UBX3YDL091C APA2P22108 325 aa2.09□□□□□ -2.08
UBX3YDL091C GPI12P23797 304 aa2.09□□□□□ -2.08
UBX3YDL091C CNB1P25296 175 aa2.09□□□□□ -2.08
UBX3YDL091C RPB9P27999 122 aa2.09□□□□□ -2.08
UBX3YDL091C IMP1P28627 190 aa2.09□□□□□ -2.08
UBX3YDL091C ATP7P30902 174 aa2.09□□□□□ -2.08
UBX3YDL091C FIG1P38224 298 aa2.09□□□□□ -2.08
UBX3YDL091C HYR1P40581 163 aaKnown RBP2.09□□□□□ -2.08
UBX3YDL091C AGP3P43548 558 aa2.09□□□□□ -2.08
UBX3YDL091C RPE1P46969 238 aa2.09□□□□□ -2.08
UBX3YDL091C GLG2P47011 380 aa2.09□□□□□ -2.08
UBX3YDL091C YJR056CP47115 236 aa2.09□□□□□ -2.08
UBX3YDL091C RPL4BP49626 362 aaKnown RBP2.09□□□□□ -2.08
UBX3YDL091C UBC13P52490 153 aa2.09□□□□□ -2.08
UBX3YDL091C BIO4P53630 237 aa2.09□□□□□ -2.08
UBX3YDL091C NHP10Q03435 203 aa2.09□□□□□ -2.08
UBX3YDL091C YPL278CQ08990 100 aa2.09□□□□□ -2.08
UBX3YDL091C POM33Q12164 279 aa2.09□□□□□ -2.08
UBX3YDL091C YOL107WQ12239 342 aa2.09□□□□□ -2.08
UBX3YDL091C PRP46Q12417 451 aaPredicted RBP2.09□□□□□ -2.08
UBX3YDL091C SNF8Q12483 233 aa2.09□□□□□ -2.08
UBX3YDL091C Q0144Q9ZZW2 109 aa2.09□□□□□ -2.08
UBX3YDL091C SPT6P23615 1451 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C ESP1Q03018 1630 aa2.08□□□□□ -2.08
UBX3YDL091C MYO2P19524 1574 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C STU1P38198 1513 aa2.08□□□□□ -2.08
UBX3YDL091C CDC8P00572 216 aa2.08□□□□□ -2.08
UBX3YDL091C CMD1P06787 147 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C QCR2P07257 368 aa2.08□□□□□ -2.08
UBX3YDL091C RPL27AP0C2H6 136 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C RPL27BP0C2H7 136 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C ZWF1P11412 505 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C IDH1P28834 360 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
UBX3YDL091C PRX1P34227 261 aaKnown RBP2.08□□□□□ -2.08
UBX3YDL091C RGI1P40043 161 aaPredicted RBP2.08□□□□□ -2.08
UBX3YDL091C GTT1P40582 234 aa2.08□□□□□ -2.08
UBX3YDL091C YFL064CP43540 174 aa2.08□□□□□ -2.08
UBX3YDL091C RPC17P47076 161 aa2.08□□□□□ -2.08
UBX3YDL091C YJR141WP47172 347 aaPredicted RBP2.08□□□□□ -2.08
UBX3YDL091C RSM27P53305 110 aa2.08□□□□□ -2.08
UBX3YDL091C YNL040WP53960 456 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms