RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W UBC12P52491 188 aa3.29□□□□□ -1.88
TSR1YDL060W LST7P53237 242 aa3.29□□□□□ -1.88
TSR1YDL060W IRC15Q02733 499 aa3.29□□□□□ -1.88
TSR1YDL060W AIM36Q03798 255 aa3.29□□□□□ -1.88
TSR1YDL060W CAC2Q04199 468 aa3.29□□□□□ -1.88
TSR1YDL060W TRM12Q04235 462 aa3.29□□□□□ -1.88
TSR1YDL060W YHC1Q05900 231 aaKnown RBP3.29□□□□□ -1.88
TSR1YDL060W RAD28Q12021 506 aa3.29□□□□□ -1.88
TSR1YDL060W PST2Q12335 198 aaKnown RBP3.29□□□□□ -1.88
TSR1YDL060W YOP1Q12402 180 aa3.29□□□□□ -1.88
TSR1YDL060W ERP3Q12403 225 aa3.29□□□□□ -1.88
TSR1YDL060W AI5_BETAQ9ZZX0 354 aa3.29□□□□□ -1.88
TSR1YDL060W AEP1P32493 518 aa3.29□□□□□ -1.88
TSR1YDL060W SUI1P32911 108 aaKnown RBP3.29□□□□□ -1.88
TSR1YDL060W SOL2P37262 315 aa3.29□□□□□ -1.88
TSR1YDL060W STT4P37297 1900 aa3.29□□□□□ -1.88
TSR1YDL060W RIB1P38066 345 aa3.29□□□□□ -1.88
TSR1YDL060W RTC3P38804 111 aaPredicted RBP3.29□□□□□ -1.88
TSR1YDL060W NVJ1P38881 321 aa3.29□□□□□ -1.88
TSR1YDL060W ALG11P53954 548 aaKnown RBP3.29□□□□□ -1.88
TSR1YDL060W PRP38Q00723 242 aaPredicted RBP3.29□□□□□ -1.88
TSR1YDL060W CTL1Q03220 320 aaKnown RBP3.29□□□□□ -1.88
TSR1YDL060W ATX2Q12067 313 aa3.29□□□□□ -1.88
TSR1YDL060W YOR114WQ12219 294 aa3.29□□□□□ -1.88
TSR1YDL060W DET1Q99288 334 aaKnown RBP3.29□□□□□ -1.88
TSR1YDL060W THP2O13539 261 aaKnown RBP3.28□□□□□ -1.88
TSR1YDL060W MRP1P10662 321 aaKnown RBP3.28□□□□□ -1.88
TSR1YDL060W PHO80P20052 293 aa3.28□□□□□ -1.88
TSR1YDL060W MRPL8P22353 238 aa3.28□□□□□ -1.88
TSR1YDL060W PRP18P33411 251 aaPredicted RBP3.28□□□□□ -1.88
TSR1YDL060W PHD1P36093 366 aa3.28□□□□□ -1.88
TSR1YDL060W CYC2P38909 366 aa3.28□□□□□ -1.88
TSR1YDL060W HAT2P39984 401 aa3.28□□□□□ -1.88
TSR1YDL060W AZR1P50080 613 aa3.28□□□□□ -1.88
TSR1YDL060W POP6P53218 158 aa3.28□□□□□ -1.88
TSR1YDL060W MTQ1P53944 314 aa3.28□□□□□ -1.88
TSR1YDL060W BET5Q03630 159 aa3.28□□□□□ -1.88
TSR1YDL060W OST6Q03723 332 aa3.28□□□□□ -1.88
TSR1YDL060W BNA5Q05979 453 aa3.28□□□□□ -1.88
TSR1YDL060W YOR387CQ08910 206 aa3.28□□□□□ -1.88
TSR1YDL060W LAA1P39526 2014 aa3.28□□□□□ -1.89
TSR1YDL060W MKK1P32490 508 aa3.27□□□□□ -1.89
TSR1YDL060W SWD2P36104 329 aaPredicted RBP3.27□□□□□ -1.89
TSR1YDL060W YJL218WP40892 196 aaKnown RBP3.27□□□□□ -1.89
TSR1YDL060W YCH1P42937 148 aa3.27□□□□□ -1.89
TSR1YDL060W TAD2P47058 250 aa3.27□□□□□ -1.89
TSR1YDL060W MCM22P47167 239 aa3.27□□□□□ -1.89
TSR1YDL060W YGL159WP53110 370 aa3.27□□□□□ -1.89
TSR1YDL060W RCF2P53721 224 aa3.27□□□□□ -1.89
TSR1YDL060W YNL095CP53932 642 aa3.27□□□□□ -1.89
TSR1YDL060W YNL010WP53981 241 aaKnown RBP3.27□□□□□ -1.89
TSR1YDL060W TIM8P57744 87 aa3.27□□□□□ -1.89
TSR1YDL060W NUP116Q02630 1113 aa3.27□□□□□ -1.89
TSR1YDL060W BCH1Q05029 724 aa3.27□□□□□ -1.89
TSR1YDL060W DCR2Q05924 578 aa3.27□□□□□ -1.89
TSR1YDL060W GAT3Q07928 141 aa3.27□□□□□ -1.89
TSR1YDL060W ASP3-2P0CX77 362 aa3.27□□□□□ -1.89
TSR1YDL060W ASP3-3P0CX78 362 aa3.27□□□□□ -1.89
TSR1YDL060W ASP3-4P0CX79 362 aa3.27□□□□□ -1.89
TSR1YDL060W ASP3-1P0CZ17 362 aa3.27□□□□□ -1.89
TSR1YDL060W ZWF1P11412 505 aaKnown RBP3.27□□□□□ -1.89
TSR1YDL060W RPB3P16370 318 aaKnown RBP3.27□□□□□ -1.89
TSR1YDL060W YCR100CP25606 316 aa3.27□□□□□ -1.89
TSR1YDL060W NAM9P27929 486 aa3.27□□□□□ -1.89
TSR1YDL060W ACB1P31787 87 aa3.27□□□□□ -1.89
TSR1YDL060W MIC12P38341 106 aa3.27□□□□□ -1.89
TSR1YDL060W EFM1P38732 585 aa3.27□□□□□ -1.89
TSR1YDL060W MPC1P53157 130 aaKnown RBP3.27□□□□□ -1.89
TSR1YDL060W YNR048WP53740 393 aa3.27□□□□□ -1.89
TSR1YDL060W PEX12Q04370 399 aa3.27□□□□□ -1.89
TSR1YDL060W CSM3Q04659 317 aa3.27□□□□□ -1.89
TSR1YDL060W SNA4Q07549 140 aa3.27□□□□□ -1.89
TSR1YDL060W YPD1Q07688 167 aa3.27□□□□□ -1.89
TSR1YDL060W YRA1Q12159 226 aaKnown RBP3.27□□□□□ -1.89
TSR1YDL060W YER190C-BP0CX94 160 aa3.26□□□□□ -1.89
TSR1YDL060W YEL077W-AP0CX95 160 aa3.26□□□□□ -1.89
TSR1YDL060W YGR296C-BP0CX96 160 aa3.26□□□□□ -1.89
TSR1YDL060W YPL283W-BP0CX97 160 aa3.26□□□□□ -1.89
TSR1YDL060W YPR204C-AP0CX98 160 aa3.26□□□□□ -1.89
TSR1YDL060W MIG1P27705 504 aa3.26□□□□□ -1.89
TSR1YDL060W PHA2P32452 334 aa3.26□□□□□ -1.89
TSR1YDL060W MCR1P36060 302 aaKnown RBP3.26□□□□□ -1.89
TSR1YDL060W DHH1P39517 506 aaKnown RBP3.26□□□□□ -1.89
TSR1YDL060W RBG1P39729 369 aa3.26□□□□□ -1.89
TSR1YDL060W GLG2P47011 380 aa3.26□□□□□ -1.89
TSR1YDL060W YJR111CP47148 283 aaKnown RBP3.26□□□□□ -1.89
TSR1YDL060W ERV14P53173 138 aa3.26□□□□□ -1.89
TSR1YDL060W SLM2P53955 656 aa3.26□□□□□ -1.89
TSR1YDL060W ODC1Q03028 310 aa3.26□□□□□ -1.89
TSR1YDL060W SEC13Q04491 297 aaKnown RBP3.26□□□□□ -1.89
TSR1YDL060W GIM5Q04493 163 aa3.26□□□□□ -1.89
TSR1YDL060W DAP1Q12091 152 aa3.26□□□□□ -1.89
TSR1YDL060W SFM1Q12314 213 aa3.26□□□□□ -1.89
TSR1YDL060W WTM1Q12363 437 aaKnown RBP3.26□□□□□ -1.89
TSR1YDL060W YAR066WP0CX18 203 aa3.26□□□□□ -1.89
TSR1YDL060W YHR214WP0CX19 203 aa3.26□□□□□ -1.89
TSR1YDL060W SLY1P22213 666 aa3.26□□□□□ -1.89
TSR1YDL060W RPS1BP23248 255 aaKnown RBP3.26□□□□□ -1.89
TSR1YDL060W URA10P30402 227 aa3.26□□□□□ -1.89
TSR1YDL060W IES6P32617 166 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms