RNA–Protein interactions for RNA: YDL048C

STP4, Transcript of Protein containing a Kruppel-type zinc-finger domain, yeast

Gene STP4, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STP4	YDL048C	SFC1	P33303	322 aa		4.27	□□□□□ -1.73
STP4	YDL048C	QDR3	P38227	689 aa		4.27	□□□□□ -1.73
STP4	YDL048C	RPS20	P38701	121 aa	Known RBP	4.27	□□□□□ -1.73
STP4	YDL048C	DOG1	P38774	246 aa		4.27	□□□□□ -1.73
STP4	YDL048C	PHO90	P39535	881 aa		4.27	□□□□□ -1.73
STP4	YDL048C	SNU13	P39990	126 aa	Known RBP	4.27	□□□□□ -1.73
STP4	YDL048C	YIL060W	P40519	144 aa		4.27	□□□□□ -1.73
STP4	YDL048C	RPA43	P46669	326 aa		4.27	□□□□□ -1.73
STP4	YDL048C	CTK2	P46962	323 aa		4.27	□□□□□ -1.73
STP4	YDL048C	YGR168C	P53293	376 aa		4.27	□□□□□ -1.73
STP4	YDL048C	HNT1	Q04344	158 aa	Known RBP	4.27	□□□□□ -1.73
STP4	YDL048C	MCH1	Q07376	486 aa		4.27	□□□□□ -1.73
STP4	YDL048C	ATG10	Q07879	167 aa		4.27	□□□□□ -1.73
STP4	YDL048C	PEX27	Q08580	376 aa		4.27	□□□□□ -1.73
STP4	YDL048C	IRC13	Q08630	104 aa		4.27	□□□□□ -1.73
STP4	YDL048C	AFT2	Q08957	416 aa		4.27	□□□□□ -1.73
STP4	YDL048C	SIA1	Q12212	622 aa		4.27	□□□□□ -1.73
STP4	YDL048C	YLR415C	O13578	112 aa		4.26	□□□□□ -1.73
STP4	YDL048C	RPL9A	P05738	191 aa	Known RBP	4.26	□□□□□ -1.73
STP4	YDL048C	YLL053C	P0CD98	152 aa		4.26	□□□□□ -1.73
STP4	YDL048C	ERD1	P16151	362 aa		4.26	□□□□□ -1.73
STP4	YDL048C	ELO2	P25358	347 aa		4.26	□□□□□ -1.73
STP4	YDL048C	YCL002C	P25565	263 aa		4.26	□□□□□ -1.73
STP4	YDL048C	FEN2	P25621	512 aa	Known RBP	4.26	□□□□□ -1.73
STP4	YDL048C	APE2	P32454	952 aa	Known RBP	4.26	□□□□□ -1.73
STP4	YDL048C	SNC2	P33328	115 aa		4.26	□□□□□ -1.73
STP4	YDL048C	YPT35	P38815	214 aa	Known RBP	4.26	□□□□□ -1.73
STP4	YDL048C	BAT1	P38891	393 aa	Known RBP	4.26	□□□□□ -1.73
STP4	YDL048C	FIS1	P40515	155 aa		4.26	□□□□□ -1.73
STP4	YDL048C	GLR1	P41921	483 aa	Known RBP	4.26	□□□□□ -1.73
STP4	YDL048C	SSY5	P47002	699 aa		4.26	□□□□□ -1.73
STP4	YDL048C	DIE2	P50076	525 aa		4.26	□□□□□ -1.73
STP4	YDL048C	MIC26	P50087	233 aa		4.26	□□□□□ -1.73
STP4	YDL048C	RPL9B	P51401	191 aa	Known RBP	4.26	□□□□□ -1.73
STP4	YDL048C	SCS3	P53012	380 aa		4.26	□□□□□ -1.73
STP4	YDL048C	VEL1	P53058	206 aa		4.26	□□□□□ -1.73
STP4	YDL048C	USE1	P53146	245 aa		4.26	□□□□□ -1.73
STP4	YDL048C	ALG13	P53178	202 aa		4.26	□□□□□ -1.73
STP4	YDL048C	LST7	P53237	242 aa		4.26	□□□□□ -1.73
STP4	YDL048C	DAD3	P69850	94 aa		4.26	□□□□□ -1.73
STP4	YDL048C	LRS4	Q04087	347 aa	Known RBP	4.26	□□□□□ -1.73
STP4	YDL048C	TSA2	Q04120	196 aa		4.26	□□□□□ -1.73
STP4	YDL048C	RPC11	Q04307	110 aa	Predicted RBP	4.26	□□□□□ -1.73
STP4	YDL048C	SHH3	Q04487	196 aa		4.26	□□□□□ -1.73
STP4	YDL048C	RNH202	Q05635	350 aa		4.26	□□□□□ -1.73
STP4	YDL048C	COQ11	Q05892	277 aa		4.26	□□□□□ -1.73
STP4	YDL048C	DIC1	Q06143	298 aa		4.26	□□□□□ -1.73
STP4	YDL048C	CNL1	Q06333	122 aa		4.26	□□□□□ -1.73
STP4	YDL048C	SPC3	Q12133	184 aa		4.26	□□□□□ -1.73
STP4	YDL048C	RAX2	Q12465	1220 aa		4.26	□□□□□ -1.73
STP4	YDL048C	YLR462W	O13556	202 aa		4.25	□□□□□ -1.73
STP4	YDL048C	HIS1	P00498	297 aa	Known RBP	4.25	□□□□□ -1.73
STP4	YDL048C	YML003W	P0CF16	290 aa		4.25	□□□□□ -1.73
STP4	YDL048C	YER190C-B	P0CX94	160 aa		4.25	□□□□□ -1.73
STP4	YDL048C	YEL077W-A	P0CX95	160 aa		4.25	□□□□□ -1.73
STP4	YDL048C	YGR296C-B	P0CX96	160 aa		4.25	□□□□□ -1.73
STP4	YDL048C	YPL283W-B	P0CX97	160 aa		4.25	□□□□□ -1.73
STP4	YDL048C	YPR204C-A	P0CX98	160 aa		4.25	□□□□□ -1.73
STP4	YDL048C	SPO12	P17123	173 aa		4.25	□□□□□ -1.73
STP4	YDL048C	PRP45	P28004	379 aa	Predicted RBP	4.25	□□□□□ -1.73
STP4	YDL048C	PTM1	P32857	523 aa		4.25	□□□□□ -1.73
STP4	YDL048C	KTI12	P34253	313 aa	Known RBP	4.25	□□□□□ -1.73
STP4	YDL048C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
STP4	YDL048C	YBR013C	P38215	129 aa		4.25	□□□□□ -1.73
STP4	YDL048C	SLM6	P38343	150 aa		4.25	□□□□□ -1.73
STP4	YDL048C	ELO1	P39540	310 aa		4.25	□□□□□ -1.73
STP4	YDL048C	TIF34	P40217	347 aa	Known RBP	4.25	□□□□□ -1.73
STP4	YDL048C	AIM23	P47015	356 aa		4.25	□□□□□ -1.73
STP4	YDL048C	YJR015W	P47090	510 aa		4.25	□□□□□ -1.73
STP4	YDL048C	HXT16	P47185	567 aa		4.25	□□□□□ -1.73
STP4	YDL048C	YIP1	P53039	248 aa		4.25	□□□□□ -1.73
STP4	YDL048C	YHC1	Q05900	231 aa	Known RBP	4.25	□□□□□ -1.73
STP4	YDL048C	PFA4	Q12006	378 aa		4.25	□□□□□ -1.73
STP4	YDL048C	RLM1	Q12224	676 aa		4.25	□□□□□ -1.73
STP4	YDL048C	ZPS1	Q12512	249 aa		4.25	□□□□□ -1.73
STP4	YDL048C	NUP159	P40477	1460 aa		4.25	□□□□□ -1.73
STP4	YDL048C	CHO1	P08456	276 aa		4.24	□□□□□ -1.73
STP4	YDL048C	EXO70	P19658	623 aa		4.24	□□□□□ -1.73
STP4	YDL048C	LSB5	P25369	354 aa		4.24	□□□□□ -1.73
STP4	YDL048C	STP22	P25604	385 aa		4.24	□□□□□ -1.73
STP4	YDL048C	SRB6	P32570	121 aa		4.24	□□□□□ -1.73
STP4	YDL048C	PPZ2	P33329	710 aa		4.24	□□□□□ -1.73
STP4	YDL048C	HES1	P35843	434 aa		4.24	□□□□□ -1.73
STP4	YDL048C	YKR041W	P36134	250 aa		4.24	□□□□□ -1.73
STP4	YDL048C	YAL037W	P39728	267 aa		4.24	□□□□□ -1.73
STP4	YDL048C	PHM8	P40025	321 aa		4.24	□□□□□ -1.73
STP4	YDL048C	GLE2	P40066	365 aa		4.24	□□□□□ -1.73
STP4	YDL048C	HAC1	P41546	238 aa		4.24	□□□□□ -1.73
STP4	YDL048C	YFL064C	P43540	174 aa		4.24	□□□□□ -1.73
STP4	YDL048C	UBX6	P47049	396 aa		4.24	□□□□□ -1.73
STP4	YDL048C	YGL039W	P53183	348 aa	Known RBP	4.24	□□□□□ -1.73
STP4	YDL048C	YNL010W	P53981	241 aa	Known RBP	4.24	□□□□□ -1.73
STP4	YDL048C	YDR366C	P87287	132 aa		4.24	□□□□□ -1.73
STP4	YDL048C	YDR209C	Q03480	137 aa		4.24	□□□□□ -1.73
STP4	YDL048C	HPT1	Q04178	221 aa	Known RBP	4.24	□□□□□ -1.73
STP4	YDL048C	HOF1	Q05080	669 aa		4.24	□□□□□ -1.73
STP4	YDL048C	ARC18	Q05933	178 aa	Known RBP	4.24	□□□□□ -1.73
STP4	YDL048C	CTR3	Q06686	241 aa		4.24	□□□□□ -1.73
STP4	YDL048C	YOR387C	Q08910	206 aa		4.24	□□□□□ -1.73
STP4	YDL048C	FDH1	Q08911	376 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms