RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C PEX11Q12462 236 aa2.29□□□□□ -2.04
SHG1YBR258C UGA1P17649 471 aa2.28□□□□□ -2.04
SHG1YBR258C RPL16BP26785 198 aaKnown RBP2.28□□□□□ -2.04
SHG1YBR258C INO2P26798 304 aa2.28□□□□□ -2.04
SHG1YBR258C TPO5P36029 618 aa2.28□□□□□ -2.04
SHG1YBR258C CAB3P36076 571 aa2.28□□□□□ -2.04
SHG1YBR258C RPC37P36121 282 aa2.28□□□□□ -2.04
SHG1YBR258C AIM29P36154 155 aa2.28□□□□□ -2.04
SHG1YBR258C MRPL15P36523 253 aa2.28□□□□□ -2.04
SHG1YBR258C YMR262WP38430 313 aa2.28□□□□□ -2.04
SHG1YBR258C ASP1P38986 381 aaPredicted RBP2.28□□□□□ -2.04
SHG1YBR258C YIR035CP40579 254 aa2.28□□□□□ -2.04
SHG1YBR258C GTO1P48239 356 aa2.28□□□□□ -2.04
SHG1YBR258C YGL118CP53132 145 aa2.28□□□□□ -2.04
SHG1YBR258C YPL077CQ02831 240 aa2.28□□□□□ -2.04
SHG1YBR258C YDR209CQ03480 137 aa2.28□□□□□ -2.04
SHG1YBR258C YMR111CQ04461 462 aaPredicted RBP2.28□□□□□ -2.04
SHG1YBR258C PLB3Q08108 686 aa2.28□□□□□ -2.04
SHG1YBR258C ABP140Q08641 628 aaKnown RBP2.28□□□□□ -2.04
SHG1YBR258C PRP46Q12417 451 aaPredicted RBP2.28□□□□□ -2.04
SHG1YBR258C CPT1P17898 393 aa2.27□□□□□ -2.05
SHG1YBR258C VPS1P21576 704 aaKnown RBP2.27□□□□□ -2.05
SHG1YBR258C GPI12P23797 304 aa2.27□□□□□ -2.05
SHG1YBR258C FMT1P32785 401 aa2.27□□□□□ -2.05
SHG1YBR258C YKL102CP34249 101 aa2.27□□□□□ -2.05
SHG1YBR258C SWD2P36104 329 aaPredicted RBP2.27□□□□□ -2.05
SHG1YBR258C YBR062CP38239 180 aa2.27□□□□□ -2.05
SHG1YBR258C YHL044WP38727 235 aa2.27□□□□□ -2.05
SHG1YBR258C SPO73P40031 143 aa2.27□□□□□ -2.05
SHG1YBR258C AGP3P43548 558 aa2.27□□□□□ -2.05
SHG1YBR258C YPT32P51996 222 aaKnown RBP2.27□□□□□ -2.05
SHG1YBR258C UFD1P53044 361 aa2.27□□□□□ -2.05
SHG1YBR258C RPN14P53196 417 aa2.27□□□□□ -2.05
SHG1YBR258C YNL260CP53846 198 aa2.27□□□□□ -2.05
SHG1YBR258C ADH6Q04894 360 aaKnown RBP2.27□□□□□ -2.05
SHG1YBR258C YPL264CQ08980 353 aa2.27□□□□□ -2.05
SHG1YBR258C PRM7Q12459 698 aa2.27□□□□□ -2.05
SHG1YBR258C YIL002W-AQ3E7Z5 69 aa2.27□□□□□ -2.05
SHG1YBR258C RAD7P06779 565 aa2.26□□□□□ -2.05
SHG1YBR258C AEP1P32493 518 aa2.26□□□□□ -2.05
SHG1YBR258C AST1P35183 429 aa2.26□□□□□ -2.05
SHG1YBR258C MBA1P38300 278 aa2.26□□□□□ -2.05
SHG1YBR258C MED8P38304 223 aa2.26□□□□□ -2.05
SHG1YBR258C EDC2P40023 145 aaPredicted RBP2.26□□□□□ -2.05
SHG1YBR258C PCL7P40186 285 aa2.26□□□□□ -2.05
SHG1YBR258C YFL064CP43540 174 aa2.26□□□□□ -2.05
SHG1YBR258C PNC1P53184 216 aaKnown RBP2.26□□□□□ -2.05
SHG1YBR258C CAX4P53223 239 aa2.26□□□□□ -2.05
SHG1YBR258C YDR222WQ04925 415 aa2.26□□□□□ -2.05
SHG1YBR258C BER1Q06688 274 aaKnown RBP2.26□□□□□ -2.05
SHG1YBR258C YPR064WQ12492 139 aa2.26□□□□□ -2.05
SHG1YBR258C YAL063C-AQ3E791 96 aa2.26□□□□□ -2.05
SHG1YBR258C MEK1P24719 497 aaPredicted RBP2.25□□□□□ -2.05
SHG1YBR258C SPT8P38915 602 aa2.25□□□□□ -2.05
SHG1YBR258C KEL2P50090 882 aa2.25□□□□□ -2.05
SHG1YBR258C RHO3Q00245 231 aaKnown RBP2.25□□□□□ -2.05
SHG1YBR258C GAS3Q03655 524 aa2.25□□□□□ -2.05
SHG1YBR258C EMI1Q04406 187 aa2.25□□□□□ -2.05
SHG1YBR258C YPR114WQ06107 315 aa2.25□□□□□ -2.05
SHG1YBR258C PEX30Q06169 523 aa2.25□□□□□ -2.05
SHG1YBR258C MDM32Q12171 622 aa2.25□□□□□ -2.05
SHG1YBR258C GEP5Q12393 293 aa2.25□□□□□ -2.05
SHG1YBR258C ARO4P32449 370 aaKnown RBP2.24□□□□□ -2.05
SHG1YBR258C MRPL6P32904 214 aa2.24□□□□□ -2.05
SHG1YBR258C YKL063CP35725 167 aa2.24□□□□□ -2.05
SHG1YBR258C HIS2P38635 335 aa2.24□□□□□ -2.05
SHG1YBR258C CUP9P41817 306 aa2.24□□□□□ -2.05
SHG1YBR258C TPN1P53099 579 aa2.24□□□□□ -2.05
SHG1YBR258C YGL185CP53100 379 aa2.24□□□□□ -2.05
SHG1YBR258C APJ1P53940 528 aa2.24□□□□□ -2.05
SHG1YBR258C YML018CQ03730 393 aa2.24□□□□□ -2.05
SHG1YBR258C TAZ1Q06510 381 aa2.24□□□□□ -2.05
SHG1YBR258C YPR195CQ06594 109 aa2.24□□□□□ -2.05
SHG1YBR258C AI5_BETAQ9ZZX0 354 aa2.24□□□□□ -2.05
SHG1YBR258C TFS1P14306 219 aa2.23□□□□□ -2.05
SHG1YBR258C CDC42P19073 191 aa2.23□□□□□ -2.05
SHG1YBR258C YCR025CP25352 136 aa2.23□□□□□ -2.05
SHG1YBR258C SUA5P32579 426 aa2.23□□□□□ -2.05
SHG1YBR258C RPS0AP32905 252 aaKnown RBP2.23□□□□□ -2.05
SHG1YBR258C MRPL3P36516 390 aa2.23□□□□□ -2.05
SHG1YBR258C PEX18P38855 283 aa2.23□□□□□ -2.05
SHG1YBR258C YFR045WP43617 309 aa2.23□□□□□ -2.05
SHG1YBR258C MRS2Q01926 470 aa2.23□□□□□ -2.05
SHG1YBR258C GTO3Q04806 366 aa2.23□□□□□ -2.05
SHG1YBR258C GPN3Q06543 272 aa2.23□□□□□ -2.05
SHG1YBR258C YLR413WQ06689 675 aa2.23□□□□□ -2.05
SHG1YBR258C ASR1Q06834 288 aa2.23□□□□□ -2.05
SHG1YBR258C YOR114WQ12219 294 aa2.23□□□□□ -2.05
SHG1YBR258C RRP42Q12277 265 aaPredicted RBP2.23□□□□□ -2.05
SHG1YBR258C PHO80P20052 293 aa2.22□□□□□ -2.05
SHG1YBR258C IME2P32581 645 aa2.22□□□□□ -2.05
SHG1YBR258C BMH2P34730 273 aaKnown RBP2.22□□□□□ -2.05
SHG1YBR258C YKL070WP36087 169 aa2.22□□□□□ -2.05
SHG1YBR258C MRPL37P36532 105 aa2.22□□□□□ -2.05
SHG1YBR258C ECM14P38836 430 aa2.22□□□□□ -2.05
SHG1YBR258C YIL059CP40520 121 aa2.22□□□□□ -2.05
SHG1YBR258C YIL012WP40551 113 aa2.22□□□□□ -2.05
SHG1YBR258C FMP33P46998 180 aa2.22□□□□□ -2.05
SHG1YBR258C IBA57P47158 497 aa2.22□□□□□ -2.05
SHG1YBR258C TAF9Q05027 157 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms