RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C HMLALPHA1P0CY07 175 aa11.65□□□□□ -0.54
SSA1YAL005C YBR096WP38256 230 aa11.65□□□□□ -0.54
SSA1YAL005C YBR242WP38331 238 aa11.65□□□□□ -0.54
SSA1YAL005C QDR1P40475 563 aa11.65□□□□□ -0.54
SSA1YAL005C YFL051CP43552 160 aa11.65□□□□□ -0.54
SSA1YAL005C ECM18Q04623 453 aa11.65□□□□□ -0.54
SSA1YAL005C ISA2Q12425 185 aa11.65□□□□□ -0.54
SSA1YAL005C CNE1P27825 502 aa11.64□□□□□ -0.55
SSA1YAL005C IPI1P38803 334 aaPredicted RBP11.64□□□□□ -0.55
SSA1YAL005C PHB2P50085 310 aa11.64□□□□□ -0.55
SSA1YAL005C IMD3P50095 523 aaKnown RBP11.64□□□□□ -0.55
SSA1YAL005C RSM23Q01163 450 aa11.64□□□□□ -0.55
SSA1YAL005C DIG2Q03373 323 aaKnown RBP11.64□□□□□ -0.55
SSA1YAL005C PEX30Q06169 523 aa11.64□□□□□ -0.55
SSA1YAL005C PRE4P30657 266 aa11.64□□□□□ -0.55
SSA1YAL005C CLG1P35190 452 aa11.64□□□□□ -0.55
SSA1YAL005C RCN1P36054 211 aa11.64□□□□□ -0.55
SSA1YAL005C MSS4P38994 779 aa11.64□□□□□ -0.55
SSA1YAL005C ERJ5P43613 295 aaPredicted RBP11.64□□□□□ -0.55
SSA1YAL005C POP6P53218 158 aa11.64□□□□□ -0.55
SSA1YAL005C TDH1P00360 332 aaKnown RBP11.63□□□□□ -0.55
SSA1YAL005C NTC20P38302 140 aaPredicted RBP11.63□□□□□ -0.55
SSA1YAL005C IRC18P47056 224 aa11.63□□□□□ -0.55
SSA1YAL005C BUD25P85052 153 aa11.63□□□□□ -0.55
SSA1YAL005C TPO3Q06451 622 aa11.63□□□□□ -0.55
SSA1YAL005C FRE3Q08905 711 aa11.63□□□□□ -0.55
SSA1YAL005C FIT3Q08907 204 aa11.63□□□□□ -0.55
SSA1YAL005C RCN2Q12044 265 aa11.63□□□□□ -0.55
SSA1YAL005C NAM2P11325 894 aa11.62□□□□□ -0.55
SSA1YAL005C SPC29P33419 253 aa11.62□□□□□ -0.55
SSA1YAL005C SOH1P38633 127 aa11.62□□□□□ -0.55
SSA1YAL005C YJL016WP47072 561 aa11.62□□□□□ -0.55
SSA1YAL005C PLP1Q04004 230 aa11.62□□□□□ -0.55
SSA1YAL005C SNA4Q07549 140 aa11.62□□□□□ -0.55
SSA1YAL005C YOR283WQ12040 230 aaKnown RBP11.62□□□□□ -0.55
SSA1YAL005C SPT14P32363 452 aa11.62□□□□□ -0.55
SSA1YAL005C APL3P38065 1025 aa11.62□□□□□ -0.55
SSA1YAL005C YHL037CP38733 133 aa11.62□□□□□ -0.55
SSA1YAL005C VMA22P38784 181 aa11.62□□□□□ -0.55
SSA1YAL005C HTD2P38790 280 aaKnown RBP11.62□□□□□ -0.55
SSA1YAL005C BUD8P41698 603 aa11.62□□□□□ -0.55
SSA1YAL005C SIP18P50263 79 aa11.62□□□□□ -0.55
SSA1YAL005C SLI1P53304 468 aa11.62□□□□□ -0.55
SSA1YAL005C NRK1P53915 240 aa11.62□□□□□ -0.55
SSA1YAL005C YNL092WP53934 400 aa11.62□□□□□ -0.55
SSA1YAL005C SNC2P33328 115 aa11.61□□□□□ -0.55
SSA1YAL005C YGL117WP53133 265 aa11.61□□□□□ -0.55
SSA1YAL005C HHT1P61830 136 aa11.61□□□□□ -0.55
SSA1YAL005C PDA1P16387 420 aaKnown RBP11.6□□□□□ -0.55
SSA1YAL005C RGC1Q06108 1083 aaKnown RBP11.6□□□□□ -0.55
SSA1YAL005C INP53Q12271 1107 aa11.6□□□□□ -0.55
SSA1YAL005C RNH203Q12338 110 aa11.6□□□□□ -0.55
SSA1YAL005C SSA3P09435 649 aaKnown RBP11.6□□□□□ -0.55
SSA1YAL005C RPL35AP0CX84 120 aaKnown RBP11.6□□□□□ -0.55
SSA1YAL005C RPL35BP0CX85 120 aaKnown RBP11.6□□□□□ -0.55
SSA1YAL005C MTC7P32633 139 aa11.6□□□□□ -0.55
SSA1YAL005C MRT4P33201 236 aaKnown RBP11.6□□□□□ -0.55
SSA1YAL005C COX16P47081 118 aa11.6□□□□□ -0.55
SSA1YAL005C TDH3P00359 332 aaKnown RBP RIP-Chip data11.59□□□□□ -0.55not detected
SSA1YAL005C YGL159WP53110 370 aa11.59□□□□□ -0.55
SSA1YAL005C RNH201P53942 307 aa11.59□□□□□ -0.55
SSA1YAL005C YDR391CQ04170 232 aa11.59□□□□□ -0.55
SSA1YAL005C GIM5Q04493 163 aa11.59□□□□□ -0.55
SSA1YAL005C RPL43AP0CX25 92 aaKnown RBP11.58□□□□□ -0.55
SSA1YAL005C RPL43BP0CX26 92 aa11.58□□□□□ -0.55
SSA1YAL005C HPA3P39979 161 aa11.58□□□□□ -0.55
SSA1YAL005C FMP48P53233 369 aa11.58□□□□□ -0.55
SSA1YAL005C SCW4P53334 386 aaKnown RBP11.58□□□□□ -0.55
SSA1YAL005C YPD1Q07688 167 aa11.58□□□□□ -0.55
SSA1YAL005C TGS1Q12052 315 aa11.58□□□□□ -0.55
SSA1YAL005C WTM2Q12206 467 aa11.58□□□□□ -0.55
SSA1YAL005C PET18P25362 215 aa11.58□□□□□ -0.56
SSA1YAL005C AFG1P32317 509 aa11.58□□□□□ -0.56
SSA1YAL005C VHT1P53241 593 aa11.58□□□□□ -0.56
SSA1YAL005C YPL199CQ08954 240 aa11.58□□□□□ -0.56
SSA1YAL005C PPZ2P33329 710 aa11.57□□□□□ -0.56
SSA1YAL005C FLX1P40464 311 aa11.57□□□□□ -0.56
SSA1YAL005C YIL060WP40519 144 aa11.57□□□□□ -0.56
SSA1YAL005C YNR048WP53740 393 aa11.57□□□□□ -0.56
SSA1YAL005C YPL077CQ02831 240 aa11.57□□□□□ -0.56
SSA1YAL005C RPL30P14120 105 aaKnown RBP11.56□□□□□ -0.56
SSA1YAL005C ARO3P14843 370 aaKnown RBP11.56□□□□□ -0.56
SSA1YAL005C AVT7P40501 490 aa11.56□□□□□ -0.56
SSA1YAL005C ACS1Q01574 713 aa11.56□□□□□ -0.56
SSA1YAL005C YMR130WQ04223 302 aa11.56□□□□□ -0.56
SSA1YAL005C NCE102Q12207 173 aaRIP-Chip data11.56□□□□□ -0.56not detected
SSA1YAL005C CLB6P32943 380 aa11.56□□□□□ -0.56
SSA1YAL005C YIP5P53108 310 aa11.56□□□□□ -0.56
SSA1YAL005C CTF19Q02732 369 aa11.56□□□□□ -0.56
SSA1YAL005C PEX10Q05568 337 aa11.56□□□□□ -0.56
SSA1YAL005C KEI1Q06346 221 aa11.56□□□□□ -0.56
SSA1YAL005C CAP2P13517 287 aa11.55□□□□□ -0.56
SSA1YAL005C DEG1P31115 442 aaKnown RBP11.55□□□□□ -0.56
SSA1YAL005C ERG3P32353 365 aa11.55□□□□□ -0.56
SSA1YAL005C TCM62P38228 572 aaKnown RBP11.55□□□□□ -0.56
SSA1YAL005C SMB1P40018 196 aaKnown RBP11.55□□□□□ -0.56
SSA1YAL005C PIG2P40187 538 aa11.55□□□□□ -0.56
SSA1YAL005C OST1P41543 476 aaKnown RBP11.55□□□□□ -0.56
SSA1YAL005C GPI14P47088 403 aaKnown RBP11.55□□□□□ -0.56
SSA1YAL005C YLR283WQ05867 314 aa11.55□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 339.6 ms