RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 GINS2Q9Y248 185 aa19.72■□□□□ 0.75
PHGDH-209ENST00000641074 BZW2Q9Y6E2 419 aaKnown RBP19.72■□□□□ 0.75
PHGDH-209ENST00000641074 HMGCRP04035 888 aa19.72■□□□□ 0.75
PHGDH-209ENST00000641074 FERP16591 822 aa19.72■□□□□ 0.75
PHGDH-209ENST00000641074 PTK2Q05397 1052 aa19.72■□□□□ 0.75
PHGDH-209ENST00000641074 ARHGAP29Q52LW3 1261 aa19.72■□□□□ 0.75
PHGDH-209ENST00000641074 IRX2Q9BZI1 471 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-209ENST00000641074 HTTP42858 3142 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 TRIP12Q14669 1992 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-209ENST00000641074 ERLIN2O94905 339 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 GNAT1P11488 350 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 FGFR4P22455 802 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 OSTNP61366 133 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 MAP3K21Q5TCX8 1036 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 ZNF571Q7Z3V5 609 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-209ENST00000641074 KIAA1328Q86T90 577 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 OR5B17Q8NGF7 314 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 RAET1EQ8TD07 263 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 KAT5Q92993 513 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 GCOM2Q9BZD3 368 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-209ENST00000641074 PCDHA13Q9Y5I0 950 aa19.71■□□□□ 0.75
PHGDH-209ENST00000641074 RCCD1A6NED2 376 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 RBAK-RBAKDNI3L0D1 243 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 FOXN3O00409 490 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-209ENST00000641074 EVI5O60447 810 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 GNRH1P01148 92 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 MCF2P10911 925 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 GNG11P61952 73 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 NBPF20Q3BBV1 942 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 ZNF662Q6ZS27 426 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 PPM1KQ8N3J5 372 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 KIF18AQ8NI77 898 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 HELQQ8TDG4 1101 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 ELMO3Q96BJ8 720 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 FAM212AQ96EL1 285 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 NT5C1BQ96P26 610 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 OSMRQ99650 979 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 PI4K2AQ9BTU6 479 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 TRIM10Q9UDY6 481 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 DNAI1Q9UI46 699 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 A0A1B0GUA9 196 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 FANCGO15287 622 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 VNN1O95497 513 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 HLA-DRAP01903 254 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 VAV2P52735 878 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 BIRC3Q13489 604 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 SLC18A3Q16572 532 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 WDR49Q8IV35 697 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 TMEM192Q8IY95 271 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 KLHDC9Q8NEP7 349 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 VTI1AQ96AJ9 217 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 ERO1AQ96HE7 468 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 KREMEN1Q96MU8 473 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.7■□□□□ 0.74
PHGDH-209ENST00000641074 IFIH1Q9BYX4 1025 aaKnown RBP19.7■□□□□ 0.74
PHGDH-209ENST00000641074 LACRTQ9GZZ8 138 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 ADAMTS1Q9UHI8 967 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 PAXBP1Q9Y5B6 917 aa19.7■□□□□ 0.74
PHGDH-209ENST00000641074 SCN10AQ9Y5Y9 1956 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 A0A087X0T9 212 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 FKTNO75072 461 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 ZC3H11AO75152 810 aaKnown RBP eCLIP19.69■□□□□ 0.74
PHGDH-209ENST00000641074 MYCNP04198 464 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-209ENST00000641074 FAM228BP0C875 321 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 DARSP14868 501 aaKnown RBP19.69■□□□□ 0.74
PHGDH-209ENST00000641074 KCNA10Q16322 511 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 PXYLP1Q8TE99 480 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 ZNF296Q8WUU4 475 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-209ENST00000641074 TATDN2Q93075 761 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 JAKMIP2Q96AA8 810 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 WDR24Q96S15 920 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 THSD7BQ9C0I4 1608 aa19.69■□□□□ 0.74
PHGDH-209ENST00000641074 KIF5CO60282 957 aa19.68■□□□□ 0.74
PHGDH-209ENST00000641074 ASGR1P07306 291 aa19.68■□□□□ 0.74
PHGDH-209ENST00000641074 PIK3CAP42336 1068 aa19.68■□□□□ 0.74
PHGDH-209ENST00000641074 AP3M2P53677 418 aa19.68■□□□□ 0.74
PHGDH-209ENST00000641074 MFAP3P55082 362 aa19.68■□□□□ 0.74
PHGDH-209ENST00000641074 SURF1Q15526 300 aa19.68■□□□□ 0.74
PHGDH-209ENST00000641074 CCDC122Q5T0U0 273 aa19.68■□□□□ 0.74
PHGDH-209ENST00000641074 CCSAPQ6IQ19 270 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-209ENST00000641074 FMNL3Q8IVF7 1028 aa19.68■□□□□ 0.74
PHGDH-209ENST00000641074 RPF1Q9H9Y2 349 aaKnown RBP19.68■□□□□ 0.74
PHGDH-209ENST00000641074 GTF2IRD1Q9UHL9 959 aa19.68■□□□□ 0.74
PHGDH-209ENST00000641074 STAG3L1P0CL83 205 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 CXCL8P10145 99 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 HOXA11P31270 313 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-209ENST00000641074 MAGEA1P43355 309 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 NME8Q8N427 588 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 DDX20Q9UHI6 824 aaKnown RBP19.67■□□□□ 0.74
PHGDH-209ENST00000641074 GUCA1BQ9UMX6 200 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 B4GALT4O60513 344 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 CLTAP09496 248 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 CCDC172P0C7W6 258 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 EIF4BP23588 611 aaKnown RBP19.67■□□□□ 0.74
PHGDH-209ENST00000641074 CST5P28325 142 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-209ENST00000641074 WDR44Q5JSH3 913 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 SCARA3Q6AZY7 606 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 GDF6Q6KF10 455 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-209ENST00000641074 CATSPER4Q7RTX7 472 aa19.67■□□□□ 0.74
PHGDH-209ENST00000641074 TMEM40Q8WWA1 233 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms