RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 FNTBP49356 437 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 DNM2P50570 870 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 NLRP5P59047 1200 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 SATB1Q01826 763 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 NPY5RQ15761 445 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 USP41Q3LFD5 358 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 PPM1LQ5SGD2 360 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 JAKMIP3Q5VZ66 844 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 MCTP1Q6DN14 999 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 FUT10Q6P4F1 479 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 PRSS55Q6UWB4 352 aaPredicted RBP12.8□□□□□ -0.36
MECP2-226ENST00000640414 SMG8Q8ND04 991 aaKnown RBP12.8□□□□□ -0.36
MECP2-226ENST00000640414 OXER1Q8TDS5 423 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 SH2D3AQ9BRG2 576 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 IER2Q9BTL4 223 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 IFT122Q9HBG6 1241 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 MIOSQ9NXC5 875 aa12.8□□□□□ -0.36
MECP2-226ENST00000640414 SEPT9Q9UHD8 586 aaPredicted RBP12.8□□□□□ -0.36
MECP2-226ENST00000640414 NOTCH4Q99466 2003 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 ARL5CA6NH57 179 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 BTBD18B2RXH4 712 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 F13A1P00488 732 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 HOXA11P31270 313 aaPredicted RBP12.79□□□□□ -0.36
MECP2-226ENST00000640414 MLH1P40692 756 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 SCNN1GP51170 649 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 CREMQ03060 361 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 SAFBQ15424 915 aaKnown RBP eCLIP12.79□□□□□ -0.36
MECP2-226ENST00000640414 SF3A2Q15428 464 aaKnown RBP12.79□□□□□ -0.36
MECP2-226ENST00000640414 PRR16Q569H4 304 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 RTP2Q5QGT7 225 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 LIN9Q5TKA1 542 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 POTEHQ6S545 545 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 DIS3L2Q8IYB7 885 aaKnown RBP12.79□□□□□ -0.36
MECP2-226ENST00000640414 FAM177A1Q8N128 213 aaPredicted RBP12.79□□□□□ -0.36
MECP2-226ENST00000640414 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
MECP2-226ENST00000640414 ING5Q8WYH8 240 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 DNASE1L2Q92874 299 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 ZFP42Q96MM3 310 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 GAD1Q99259 594 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 COLEC11Q9BWP8 271 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 TMEM121BQ9BXQ6 578 aaPredicted RBP12.79□□□□□ -0.36
MECP2-226ENST00000640414 NIFKQ9BYG3 293 aaKnown RBP12.79□□□□□ -0.36
MECP2-226ENST00000640414 ZMYND12Q9H0C1 365 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 LMAN1LQ9HAT1 526 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 HCFC1R1Q9NWW0 138 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 COL4A2P08572 1712 aa12.79□□□□□ -0.36
MECP2-226ENST00000640414 TDRD15B5MCY1 1934 aaKnown RBP12.78□□□□□ -0.36
MECP2-226ENST00000640414 GREB1Q4ZG55 1949 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 hCG_1984214I3L0E3 225 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 MAN2B1O00754 1011 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 ZZEF1O43149 2961 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 CHMP2AO43633 222 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 MAFO75444 373 aaPredicted RBP12.78□□□□□ -0.36
MECP2-226ENST00000640414 NR1I2O75469 434 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 STBD1O95210 358 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 ITGA4P13612 1032 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 U2AF2P26368 475 aaKnown RBP eCLIP12.78□□□□□ -0.36
MECP2-226ENST00000640414 HOXA9P31269 272 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 CNR2P34972 360 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 CXCL12P48061 93 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 RESTQ13127 1097 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 GAS6Q14393 721 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 TANGO2Q6ICL3 276 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 LONP2Q86WA8 852 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 ZNF713Q8N859 430 aaPredicted RBP12.78□□□□□ -0.36
MECP2-226ENST00000640414 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
MECP2-226ENST00000640414 LENG9Q96B70 501 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 UBN1Q9NPG3 1134 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 DNMT3BQ9UBC3 853 aaKnown RBP12.78□□□□□ -0.36
MECP2-226ENST00000640414 KCNH3Q9ULD8 1083 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 PCDHA4Q9UN74 947 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 IPPQ9Y573 584 aa12.78□□□□□ -0.36
MECP2-226ENST00000640414 ESYT2A0FGR8 921 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 SRRM3A6NNA2 597 aaPredicted RBP12.77□□□□□ -0.37
MECP2-226ENST00000640414 XYLBO75191 536 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 KRT2P35908 639 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 RING1Q06587 406 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 NR5A1Q13285 461 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 CCDC6Q16204 474 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 FOXD4L6Q3SYB3 417 aaPredicted RBP12.77□□□□□ -0.37
MECP2-226ENST00000640414 PABPC1LQ4VXU2 614 aaKnown RBP12.77□□□□□ -0.37
MECP2-226ENST00000640414 GALNT17Q6IS24 598 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 FAM173BQ6P4H8 233 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 FOXD4L3Q6VB84 417 aaPredicted RBP12.77□□□□□ -0.37
MECP2-226ENST00000640414 BLIDQ8IZY5 108 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 C12orf50Q8NA57 414 aaPredicted RBP12.77□□□□□ -0.37
MECP2-226ENST00000640414 CNNM3Q8NE01 707 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 CCDC148Q8NFR7 591 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 SLC7A14Q8TBB6 771 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 LSM14BQ9BX40 385 aaKnown RBP12.77□□□□□ -0.37
MECP2-226ENST00000640414 GLT8D2Q9H1C3 349 aa12.77□□□□□ -0.37
MECP2-226ENST00000640414 ARRDC1-AS1Q9H2J1 176 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms