RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 AGO4Q9HCK5 861 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 ASIC3Q9UHC3 531 aa21.51■■□□□ 1.03
SYNGAP1-227ENST00000638142 CAV1Q03135 178 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 PTK6Q13882 451 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 GRK7Q8WTQ7 553 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 C1orf54Q8WWF1 131 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 POP1Q99575 1024 aaKnown RBP21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 ACSL3O95573 720 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 CLEC16AQ2KHT3 1053 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 TKFCQ3LXA3 575 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 FBXL13Q8NEE6 735 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 ATP6V0A4Q9HBG4 840 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 VEZTQ9HBM0 779 aa21.5■■□□□ 1.03
SYNGAP1-227ENST00000638142 TCP10L2B9ZVM9 353 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 GRIN3BO60391 1043 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 TTC4O95801 387 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 MMP10P09238 476 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 ADSSP30520 456 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 SAMD1Q6SPF0 538 aaPredicted RBP21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 TMC2Q8TDI7 906 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 N4BP2L2Q92802 583 aaPredicted RBP21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 CCDC127Q96BQ5 260 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 FAM81BQ96LP2 452 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 FBXO28Q9NVF7 368 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 USP15Q9Y4E8 981 aaPredicted RBP21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 UBIAD1Q9Y5Z9 338 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 TMEM120BA0PK00 339 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 ATP6V1G2O95670 118 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 GAS8O95995 478 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 ICAM1P05362 532 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 MAPK4P31152 587 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 GTF2H1P32780 548 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 ZYXQ15942 572 aaKnown RBP21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 C4orf19Q8IY42 314 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 IL31RAQ8NI17 732 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 TBC1D22BQ9NU19 505 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 RAB20Q9NX57 234 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 COL20A1Q9P218 1284 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 ANAPC7Q9UJX3 599 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 CCPG1Q9ULG6 757 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 TBX20Q9UMR3 447 aa21.49■■□□□ 1.03
SYNGAP1-227ENST00000638142 TCEA3O75764 348 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 IVDP26440 423 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 RIPK1Q13546 671 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 AOC3Q16853 763 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 VSTM1Q6UX27 236 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 USP37Q86T82 979 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 MAP4K3Q8IVH8 894 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 FAM151AQ8WW52 585 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 GPRC5CQ9NQ84 441 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 AVENQ9NQS1 362 aaPredicted RBP21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 ASTN2O75129 1339 aaPredicted RBP21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 CHKAP35790 457 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 SLC1A1P43005 524 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 PCNX4Q63HM2 1172 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 ENOSF1Q7L5Y1 443 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 GBP7Q8N8V2 638 aaPredicted RBP21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 TAS1R2Q8TE23 839 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 SAAL1Q96ER3 474 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 CHST7Q9NS84 486 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 ABCF3Q9NUQ8 709 aa21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 ZNFX1Q9P2E3 1918 aaKnown RBP21.48■■□□□ 1.03
SYNGAP1-227ENST00000638142 SUN1O94901 812 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 SPP2Q13103 211 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 SNX1Q13596 522 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 STYK1Q6J9G0 422 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 OTUD6AQ7L8S5 288 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 TMEM161BQ8NDZ6 487 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 AGBL1Q96MI9 1066 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 PLCD4Q9BRC7 762 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 TRAIPQ9BWF2 469 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 NOD2Q9HC29 1040 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 SUFUQ9UMX1 484 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 TCP11X1B4DZS4 312 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 CNGA1P29973 690 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 PTGER2P43116 358 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 SF3A3Q12874 501 aaKnown RBP eCLIP21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 MTMR1Q13613 665 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 LRRC14Q15048 493 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 FAM133BQ5BKY9 247 aaKnown RBP21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 TLDC1Q6P9B6 456 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 MFSD14AQ96MC6 490 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 CEP83Q9Y592 693 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 CD2APQ9Y5K6 639 aa21.47■■□□□ 1.03
SYNGAP1-227ENST00000638142 SORBS3O60504 671 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 MYBL1P10243 752 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 ATF2P15336 505 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 ITGA8P53708 1063 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 GHRHRQ02643 423 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 FAM102BQ5T8I3 360 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 MEX3CQ5U5Q3 659 aaKnown RBP21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 CRELD2Q6UXH1 353 aaPredicted RBP21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 MCF2L2Q86YR7 1114 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 TRIM11Q96F44 468 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 FBXL18Q96ME1 805 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 SH2D3AQ9BRG2 576 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 DCLK3Q9C098 648 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms