RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TMC5Q6UXY8 1006 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 COLEC11Q9BWP8 271 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 MRPL17Q9NRX2 175 aaKnown RBP20.18■□□□□ 0.82
CLN6-214ENST00000636314 KCNG1Q9UIX4 513 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 GDAQ9Y2T3 454 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 DMDP11532 3685 aa20.18■□□□□ 0.82
CLN6-214ENST00000636314 STX6O43752 255 aa20.17■□□□□ 0.82
CLN6-214ENST00000636314 PLCG1P19174 1290 aa20.17■□□□□ 0.82
CLN6-214ENST00000636314 SMTNP53814 917 aa20.17■□□□□ 0.82
CLN6-214ENST00000636314 CACNB1Q02641 598 aaPredicted RBP20.17■□□□□ 0.82
CLN6-214ENST00000636314 PTPAQ15257 358 aa20.17■□□□□ 0.82
CLN6-214ENST00000636314 GPBP1Q86WP2 473 aa20.17■□□□□ 0.82
CLN6-214ENST00000636314 SLC22A17Q8WUG5 538 aa20.17■□□□□ 0.82
CLN6-214ENST00000636314 SPIRE2Q8WWL2 714 aa20.17■□□□□ 0.82
CLN6-214ENST00000636314 ACO2Q99798 780 aaKnown RBP20.17■□□□□ 0.82
CLN6-214ENST00000636314 EMILIN2Q9BXX0 1053 aa20.17■□□□□ 0.82
CLN6-214ENST00000636314 ZSCAN16Q9H4T2 348 aaPredicted RBP20.17■□□□□ 0.82
CLN6-214ENST00000636314 USTQ9Y2C2 406 aa20.17■□□□□ 0.82
CLN6-214ENST00000636314 NPHP3-ACAD11A0A0J9YXS1 232 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 PRR23AA6NEV1 266 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 F8W810 466 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 C2CD2LO14523 706 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 PTGESO14684 152 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 THP07101 528 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 MARCKSP29966 332 aaPredicted RBP20.16■□□□□ 0.82
CLN6-214ENST00000636314 NBL1P41271 181 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 GLUD2P49448 558 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 CEBPZQ03701 1054 aaKnown RBP20.16■□□□□ 0.82
CLN6-214ENST00000636314 STRN3Q13033 797 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 TUSC3Q13454 348 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 DHX8Q14562 1220 aaKnown RBP20.16■□□□□ 0.82
CLN6-214ENST00000636314 TAS1R3Q7RTX0 852 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 PPFIBP1Q86W92 1011 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 FLCNQ8NFG4 579 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 FEZF2Q8TBJ5 459 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 ACSF2Q96CM8 615 aaPredicted RBP20.16■□□□□ 0.82
CLN6-214ENST00000636314 TARS2Q9BW92 718 aaKnown RBP20.16■□□□□ 0.82
CLN6-214ENST00000636314 CDT1Q9H211 546 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 LARSQ9P2J5 1176 aaKnown RBP20.16■□□□□ 0.82
CLN6-214ENST00000636314 ODF2LQ9ULJ1 636 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 SSX2IPQ9Y2D8 614 aa20.16■□□□□ 0.82
CLN6-214ENST00000636314 CASTOR2A6NHX0 329 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 KRT18P05783 430 aaKnown RBP20.15■□□□□ 0.82
CLN6-214ENST00000636314 HSP90AA1P07900 732 aaKnown RBP20.15■□□□□ 0.82
CLN6-214ENST00000636314 CLCN5P51795 746 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 HSP90AA2PQ14568 343 aaPredicted RBP20.15■□□□□ 0.82
CLN6-214ENST00000636314 FUT10Q6P4F1 479 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 RNF168Q8IYW5 571 aaPredicted RBP20.15■□□□□ 0.82
CLN6-214ENST00000636314 LRRC15Q8TF66 581 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 RABGGTAQ92696 567 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 RAD54LQ92698 747 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 REEP2Q9BRK0 252 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 NTPCRQ9BSD7 190 aaKnown RBP20.15■□□□□ 0.82
CLN6-214ENST00000636314 CCDC94Q9BW85 323 aaPredicted RBP20.15■□□□□ 0.82
CLN6-214ENST00000636314 CCSER1Q9C0I3 900 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 SFXN1Q9H9B4 322 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 BLOC1S4Q9NUP1 217 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 CACNG4Q9UBN1 327 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 FBXO2Q9UK22 296 aaPredicted RBP20.15■□□□□ 0.82
CLN6-214ENST00000636314 ADAM28Q9UKQ2 775 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 TRIP11Q15643 1979 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 SPTBN4Q9H254 2564 aa20.15■□□□□ 0.82
CLN6-214ENST00000636314 CITO14578 2027 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 H0YCG3 227 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 KLRC2P26717 231 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 TXLNAP40222 546 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 GRM5P41594 1212 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 YARSP54577 528 aaKnown RBP20.14■□□□□ 0.81
CLN6-214ENST00000636314 MCM6Q14566 821 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 ARSHQ5FYA8 562 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 SPECC1Q5M775 1068 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 MPZL3Q6UWV2 235 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 CCDC149Q6ZUS6 474 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 FRMD5Q7Z6J6 570 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 CEP120Q8N960 986 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 TMEM161BQ8NDZ6 487 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 LARP4BQ92615 738 aaKnown RBP20.14■□□□□ 0.81
CLN6-214ENST00000636314 KLHL5Q96PQ7 755 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 USP28Q96RU2 1077 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 TCHPQ9BT92 498 aa20.14■□□□□ 0.81
CLN6-214ENST00000636314 TOPORSQ9NS56 1045 aaPredicted RBP20.14■□□□□ 0.81
CLN6-214ENST00000636314 SRPRBQ9Y5M8 271 aaKnown RBP20.14■□□□□ 0.81
CLN6-214ENST00000636314 PTPRZ1P23471 2315 aaPredicted RBP20.14■□□□□ 0.81
CLN6-214ENST00000636314 SF3B1O75533 1304 aaKnown RBP eCLIP20.13■□□□□ 0.818e-9■■■■■ 155.1
CLN6-214ENST00000636314 TADA2AO75478 443 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 FAM13AO94988 1023 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 EFEMP2O95967 443 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 CNPP09543 421 aaKnown RBP20.13■□□□□ 0.81
CLN6-214ENST00000636314 MAPTP10636 758 aaKnown RBP20.13■□□□□ 0.81
CLN6-214ENST00000636314 MCF2P10911 925 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 HARSP12081 509 aaKnown RBP20.13■□□□□ 0.81
CLN6-214ENST00000636314 GLRA4Q5JXX5 417 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 CWF19L1Q69YN2 538 aaKnown RBP20.13■□□□□ 0.81
CLN6-214ENST00000636314 OTOP3Q7RTS5 596 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 TAS1R1Q7RTX1 841 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 GPR149Q86SP6 731 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 EPSTI1Q96J88 318 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 PAAF1Q9BRP4 392 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 CXCL16Q9H2A7 254 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 PTPRHQ9HD43 1115 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms