RNA–Protein interactions for RNA: ENST00000624994.1

PCDHB2-204, Transcript of protocadherin beta 2, humanhuman

TSL 3

Gene PCDHB2, Length 162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-204ENST00000624994 CEP120Q8N960 986 aa11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 ZSWIM2Q8NEG5 633 aa11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 PARD3BQ8TEW8 1205 aa11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 CACTINQ8WUQ7 758 aaKnown RBP11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 LINC01599Q8WXQ3 324 aa11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 TUBGCP2Q9BSJ2 902 aa11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 HSD3B7Q9H2F3 369 aa11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 NXF3Q9H4D5 531 aaKnown RBP11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 KANSL3Q9P2N6 904 aa11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 LIMA1Q9UHB6 759 aaKnown RBP11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 HES2Q9Y543 173 aa11.05□□□□□ -0.64
PCDHB2-204ENST00000624994 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 LACTBL1A8MY62 500 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 XPOTO43592 962 aaKnown RBP11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 RECQL4O94761 1208 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 CXCL8P10145 99 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 ACRP10323 421 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 KCNE1P15382 129 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 AKAP5P24588 427 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 KCNJ6P48051 423 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 MAN2A1Q16706 1144 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 DUOXA2Q1HG44 320 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 TCTN1Q2MV58 587 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 FILIP1LQ4L180 1135 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 TMEM240Q5SV17 173 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 ZBTB41Q5SVQ8 909 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 GLB1LQ6UWU2 654 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 AGMOQ6ZNB7 445 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 WDR49Q8IV35 697 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 TRIM59Q8IWR1 403 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 TMEM192Q8IY95 271 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 CRIPAKQ8N1N5 446 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 HERVK_113Q902F9 699 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 TOP1MTQ969P6 601 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 CCDC127Q96BQ5 260 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 APOL6Q9BWW8 343 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 RNF39Q9H2S5 420 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 RSAD1Q9HA92 442 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 CNTN3Q9P232 1028 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 C2CD2Q9Y426 696 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 SCN5AQ14524 2016 aa11.04□□□□□ -0.64
PCDHB2-204ENST00000624994 TET1Q8NFU7 2136 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 SMIM28A0A1B0GU29 152 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 GOLGA6L3A6NEY3 463 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 ARL5CA6NH57 179 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 PMM2O15305 246 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 INPPL1O15357 1258 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 N4BP1O75113 896 aaKnown RBP11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 OFD1O75665 1012 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 SERPINC1P01008 464 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 DLATP10515 647 aaKnown RBP11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 ATF7P17544 494 aaPredicted RBP11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 TNNI1P19237 187 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 WDR5P61964 334 aaKnown RBP11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 CETN1Q12798 172 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 KRT31Q15323 416 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 HSP90AA4PQ58FG1 418 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 TCERG1LQ5VWI1 586 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 OTOP2Q7RTS6 562 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 ABI1Q8IZP0 508 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 RNF169Q8NCN4 708 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 PHOSPHO2Q8TCD6 241 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 SNX27Q96L92 541 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 RPS6KC1Q96S38 1066 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 CGRRF1Q99675 332 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 PDE11AQ9HCR9 933 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 SLC38A7Q9NVC3 462 aa11.03□□□□□ -0.64
PCDHB2-204ENST00000624994 LRRIQ3A6PVS8 624 aaPredicted RBP11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 P4HA2O15460 535 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 TNNC2P02585 160 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 AFPP02771 609 aaKnown RBP11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 TPM3P06753 285 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 THP07101 528 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 ATP1A3P13637 1013 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 CYP3A5P20815 502 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 MAGEA10P43363 369 aaPredicted RBP11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 EPHB4P54760 987 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 FANCCQ00597 558 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 KCNH2Q12809 1159 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 GSE1Q14687 1217 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 TMEM132DQ14C87 1099 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 ZBTB6Q15916 424 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 VWA3BQ502W6 1294 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 DCAF17Q5H9S7 520 aaPredicted RBP11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 URGCPQ8TCY9 931 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 LPPQ93052 612 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 SLC35C1Q96A29 364 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 ANKRD36BP1Q96IX9 119 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 GAD1Q99259 594 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 TMEM117Q9H0C3 514 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 NDST4Q9H3R1 872 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 INTS13Q9NVM9 706 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 KLK14Q9P0G3 267 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 UBQLN1Q9UMX0 589 aaKnown RBP11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 SLC4A7Q9Y6M7 1214 aa11.02□□□□□ -0.65
PCDHB2-204ENST00000624994 TTC3P53804 2025 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms