RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	LRP5	O75197	1615 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	COL1A1	P02452	1464 aa	Predicted RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	AP1G1	O43747	822 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	CBX6	O95503	412 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	TTC4	O95801	387 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	UBTFL6	P0CB48	400 aa	Predicted RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	ZNF24	P17028	368 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	NT5C2	P49902	561 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	UBAP2	Q5T6F2	1119 aa	Known RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	ZNF449	Q6P9G9	518 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	RFWD3	Q6PCD5	774 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	OTUD6A	Q7L8S5	288 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	CLNK	Q7Z7G1	428 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	ADGRG6	Q86SQ4	1221 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	SPATA5	Q8NB90	893 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	C17orf50	Q8WW18	174 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	HPS3	Q969F9	1004 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	DGCR14	Q96DF8	476 aa	Known RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	CCDC97	Q96F63	343 aa	Predicted RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	CLMN	Q96JQ2	1002 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	AGAP3	Q96P47	875 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	ECSIT	Q9BQ95	431 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	RANBP17	Q9H2T7	1088 aa	Known RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	BLOC1S4	Q9NUP1	217 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	EURL	Q9NYK6	297 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	PCDHA6	Q9UN73	950 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	PCDHA8	Q9Y5H6	950 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	COL24A1	Q17RW2	1714 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	RIMBP2	O15034	1052 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	WDR46	O15213	610 aa	Known RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	PRKAB2	O43741	272 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	UCHL3	P15374	230 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	GJA8	P48165	433 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	JAM2	P57087	298 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	XIAP	P98170	497 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	CAV1	Q03135	178 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	CALCOCO2	Q13137	446 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	SPARCL1	Q14515	664 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	TAF1B	Q53T94	588 aa	Predicted RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	FAM91A1	Q658Y4	838 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	RHBDF2	Q6PJF5	856 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	PTCD3	Q96EY7	689 aa	Known RBP	11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	RHBDL2	Q9NX52	303 aa		11.42	□□□□□ -0.58
CPEB1-215	ENST00000617958	TRAF5	O00463	557 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	DNAJC6	O75061	913 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	KRT13	P13646	458 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	WDR4	P57081	412 aa	Known RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	CYLC2	Q14093	348 aa	Predicted RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	KRT72	Q14CN4	511 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	PUM3	Q15397	648 aa	Known RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	KBTBD12	Q3ZCT8	623 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	RBM26	Q5T8P6	1007 aa	Known RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	SEPT14	Q6ZU15	432 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	PHLDB2	Q86SQ0	1253 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	RELL1	Q8IUW5	271 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	PASD1	Q8IV76	773 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	SLC30A5	Q8TAD4	765 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	DENND1A	Q8TEH3	1009 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	LARP4B	Q92615	738 aa	Known RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	C18orf8	Q96DM3	657 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	EMILIN3	Q9NT22	766 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	SENP1	Q9P0U3	644 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	PPP1R9A	Q9ULJ8	1098 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	ADAMTS3	O15072	1205 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	GAS8	O95995	478 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	SPATA31D3	P0C874	917 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	LMNB1	P20700	586 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	CCNF	P41002	786 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	ACADVL	P49748	655 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	TTLL12	Q14166	644 aa	Predicted RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	BTG3	Q14201	252 aa	Predicted RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	STAT4	Q14765	748 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	GRIK5	Q16478	980 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	EDRF1	Q3B7T1	1238 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	CCDC92	Q53HC0	331 aa	Predicted RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	C11orf63	Q6NUN7	778 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	CCDC137	Q6PK04	289 aa	Known RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	SPATA31D4	Q6ZUB0	917 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	CCDC80	Q76M96	950 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	UHMK1	Q8TAS1	419 aa	Known RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	AAAS	Q9NRG9	546 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	SUN2	Q9UH99	717 aa		11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	SMG5	Q9UPR3	1016 aa	Known RBP	11.41	□□□□□ -0.58
CPEB1-215	ENST00000617958	MAGEC1	O60732	1142 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	ZNF189	O75820	626 aa	Predicted RBP	11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	ZCCHC18	P0CG32	403 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	ITIH2	P19823	946 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	GALC	P54803	685 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	GRB10	Q13322	594 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	PRPF4B	Q13523	1007 aa	Known RBP	11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	B3GNT6	Q6ZMB0	384 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	FAM47E	Q6ZV65	393 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	NLRP9	Q7RTR0	991 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	SLC35G2	Q8TBE7	412 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	MORC4	Q8TE76	937 aa		11.4	□□□□□ -0.58
CPEB1-215	ENST00000617958	TSPAN18	Q96SJ8	248 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms