RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 CACTINQ8WUQ7 758 aaKnown RBP11.76□□□□□ -0.53
COL4A1-205ENST00000615732 HPS3Q969F9 1004 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 ZNF558Q96NG5 402 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 NACC1Q96RE7 527 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 CDCA3Q99618 268 aaPredicted RBP11.76□□□□□ -0.53
COL4A1-205ENST00000615732 PRRX2Q99811 253 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 SRRTQ9BXP5 876 aaKnown RBP11.76□□□□□ -0.53
COL4A1-205ENST00000615732 S1PR5Q9H228 398 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 BHMT2Q9H2M3 363 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 TAB2Q9NYJ8 693 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 PYCARDQ9ULZ3 195 aa11.76□□□□□ -0.53
COL4A1-205ENST00000615732 ARHGEF35A5YM69 484 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 NT5C1B-RDH14C9J2C7 533 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 PES1O00541 588 aaKnown RBP11.75□□□□□ -0.53
COL4A1-205ENST00000615732 MAGEB2O15479 319 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 DARSP14868 501 aaKnown RBP11.75□□□□□ -0.53
COL4A1-205ENST00000615732 ZSCAN20P17040 1043 aaPredicted RBP11.75□□□□□ -0.53
COL4A1-205ENST00000615732 GAP43P17677 238 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 TMOD1P28289 359 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 MTIF2P46199 727 aaKnown RBP11.75□□□□□ -0.53
COL4A1-205ENST00000615732 PMS1P54277 932 aaKnown RBP11.75□□□□□ -0.53
COL4A1-205ENST00000615732 RAD51AP2Q09MP3 1159 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 TBC1D8BQ0IIM8 1120 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 SPECC1LQ69YQ0 1117 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 ANKRD54Q6NXT1 300 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 SYCE2Q6PIF2 218 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 PPFIBP1Q86W92 1011 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 CCDC112Q8NEF3 446 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 HSD17B14Q9BPX1 270 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 LXNQ9BS40 222 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 ELAC1Q9H777 363 aaKnown RBP11.75□□□□□ -0.53
COL4A1-205ENST00000615732 INTS13Q9NVM9 706 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 RNF216Q9NWF9 866 aaPredicted RBP11.75□□□□□ -0.53
COL4A1-205ENST00000615732 TBC1D7Q9P0N9 293 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
COL4A1-205ENST00000615732 PLXNA3P51805 1871 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 HOXA2O43364 376 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 GFRA3O60609 400 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 SLITRK3O94933 977 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 PDGFBP01127 241 aaPredicted RBP11.74□□□□□ -0.53
COL4A1-205ENST00000615732 P4HBP07237 508 aaKnown RBP11.74□□□□□ -0.53
COL4A1-205ENST00000615732 SKILP12757 684 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 AVPR2P30518 371 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 SFNP31947 248 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 PLCB3Q01970 1234 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 LRRC63Q05C16 580 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 EHHADHQ08426 723 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 GIT2Q14161 759 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 NR1I3Q14994 352 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 PLA2G4FQ68DD2 849 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 ANKRD40Q6AI12 368 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 B3GNT9Q6UX72 402 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 TMEM184AQ6ZMB5 413 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.74□□□□□ -0.53
COL4A1-205ENST00000615732 TMC7Q7Z402 723 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 RDM1Q8NG50 284 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 PIGOQ8TEQ8 1089 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 AUTS2Q8WXX7 1259 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 LPPQ93052 612 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 CNOT6LQ96LI5 555 aaKnown RBP11.74□□□□□ -0.53
COL4A1-205ENST00000615732 DUSP9Q99956 384 aaKnown RBP11.74□□□□□ -0.53
COL4A1-205ENST00000615732 REEP2Q9BRK0 252 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 RUSC1Q9BVN2 902 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 VPS16Q9H269 839 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 ZSWIM4Q9H7M6 989 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 NRBP2Q9NSY0 501 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 LZTS1Q9Y250 596 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 EVPLQ92817 2033 aa11.74□□□□□ -0.53
COL4A1-205ENST00000615732 FRMD3A2A2Y4 597 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 MEIS3P2A8K0S8 358 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 DKC1O60832 514 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 ZC3H11AO75152 810 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 WEE2P0C1S8 567 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 SRGAP2BP0DMP2 458 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 PRKCSHP14314 528 aaPredicted RBP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 PPM1AP35813 382 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 QARSP47897 775 aaKnown RBP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 TRIM14Q14142 442 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 ARID5BQ14865 1188 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 NOLC1Q14978 699 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 TARBP2Q15633 366 aaKnown RBP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 ARSHQ5FYA8 562 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 CENPPQ6IPU0 288 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 PDE12Q6L8Q7 609 aaKnown RBP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 RINT1Q6NUQ1 792 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 STXBP4Q6ZWJ1 553 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 ZNF598Q86UK7 904 aaKnown RBP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 TMEM173Q86WV6 379 aaPredicted RBP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 SFR1Q86XK3 245 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 KSR1Q8IVT5 923 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 SLC39A11Q8N1S5 342 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 KIAA1524Q8TCG1 905 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 SPG21Q9NZD8 308 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 KCND2Q9NZV8 630 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 PUF60Q9UHX1 559 aaKnown RBP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 PIN4Q9Y237 131 aaKnown RBP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 INPP5FQ9Y2H2 1132 aa11.73□□□□□ -0.53
COL4A1-205ENST00000615732 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL4A1-205ENST00000615732 ITIH6Q6UXX5 1313 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms