RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 APOL1O14791 398 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 MTSS1O43312 755 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 GKAP1Q5VSY0 366 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 ATP8B4Q8TF62 1192 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 UNC45AQ9H3U1 944 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 DUOX1Q9NRD9 1551 aa10.34□□□□□ -0.75
TNFRSF9-204ENST00000615230 PLA2G6O60733 806 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 TPI1P60174 286 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 NFRKBQ6P4R8 1299 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 CCDC149Q6ZUS6 474 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 OXCT2Q9BYC2 517 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 BAG5Q9UL15 447 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 CCDC188H7C350 402 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 STX2P32856 288 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 CTNNA1P35221 906 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 NLRP11P59045 1033 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 GRIK4Q16099 956 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 ANKS3Q6ZW76 656 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 NOP9Q86U38 636 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 OXER1Q8TDS5 423 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 DPP3Q9NY33 737 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 COBLO75128 1261 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 GNL1P36915 607 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 GEMIN4P57678 1058 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 SLC7A14Q8TBB6 771 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 KCNQ5Q9NR82 932 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 A0A1W2PQC6 194 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 SNX2O60749 519 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZC3H11AO75152 810 aaKnown RBP eCLIP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 RHOBTB3O94955 611 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 FAM200BP0CF97 657 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 IFNA8P32881 189 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 NCOA4Q13772 614 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 NFE2Q16621 373 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 CDO1Q16878 200 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 HEATR6Q6AI08 1181 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 FBXO16Q8IX29 292 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 SCFD1Q8WVM8 642 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 MRRFQ96E11 262 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 CAMKK2Q96RR4 588 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 ARHGEF7Q14155 803 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 ANKRD20A3Q5VUR7 823 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 VSTM4Q8IW00 320 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 USP38Q8NB14 1042 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 FAF2Q96CS3 445 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 RANBP17Q9H2T7 1088 aaKnown RBP10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 CPVLQ9H3G5 476 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 SLC45A1Q9Y2W3 748 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 SNX9Q9Y5X1 595 aa10.33□□□□□ -0.76
TNFRSF9-204ENST00000615230 RSPH10B2B2RC85 870 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 BNIP3LO60238 219 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 RTN2O75298 545 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 THP07101 528 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 RSPH10BP0C881 870 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 PPM1AP35813 382 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 AP1B1Q10567 949 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 PGM5Q15124 567 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 MEI1Q5TIA1 1274 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 RHOT1Q8IXI2 618 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 PDIK1LQ8N165 341 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 RSPH1Q8WYR4 309 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 ITGA11Q9UKX5 1188 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 AHDC1Q5TGY3 1603 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 EBAG9O00559 213 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 BASP1P80723 227 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 GIMAP7Q8NHV1 300 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 CSGALNACT1Q8TDX6 532 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 NIF3L1Q9GZT8 377 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 TRPM5Q9NZQ8 1165 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 XRN1Q8IZH2 1706 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 COL1A2P08123 1366 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 EIF4A3P38919 411 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 IFNAR2P48551 515 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 ARL4CP56559 192 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 PPIGQ13427 754 aaKnown RBP eCLIP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 TAF11Q15544 211 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 SNRNP35Q16560 246 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 FAM102AQ5T9C2 384 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 SYDE1Q6ZW31 735 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 TRAPPC11Q7Z392 1133 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 PPHLN1Q8NEY8 458 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 SAAL1Q96ER3 474 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 NSMCE4AQ9NXX6 385 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 LMO7Q8WWI1 1683 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 OGTO15294 1046 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 LUC7L3O95232 432 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 LCP1P13796 627 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 MYBPC2Q14324 1141 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 KRT31Q15323 416 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 ARMC6Q6NXE6 501 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 ALKBH5Q6P6C2 394 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 ANKS1AQ92625 1134 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 INPP5BP32019 993 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 ATP11AP98196 1134 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 ROR1Q01973 937 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 PKN2Q16513 984 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 CEP85LQ5SZL2 805 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 PBXIP1Q96AQ6 731 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms