RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 KRI1Q8N9T8 703 aaKnown RBP21.04■□□□□ 0.96
CTSA-217ENST00000607482 RAD54LQ92698 747 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 REEP2Q9BRK0 252 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 GPR62Q9BZJ7 368 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 CDT1Q9H211 546 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 PARVGQ9HBI0 331 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 SLC38A7Q9NVC3 462 aa21.04■□□□□ 0.96
CTSA-217ENST00000607482 CLDN3O15551 220 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 TRAPPC3O43617 180 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 TOM1L1O75674 476 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 B3GAT3O94766 335 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 MYBP10242 640 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 MAPTP10636 758 aaKnown RBP21.03■□□□□ 0.96
CTSA-217ENST00000607482 GRIN1Q05586 938 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 RESTQ13127 1097 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 SPECC1Q5M775 1068 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 FAM173BQ6P4H8 233 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 TMEM161BQ8NDZ6 487 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 LARP4BQ92615 738 aaKnown RBP21.03■□□□□ 0.96
CTSA-217ENST00000607482 UROC1Q96N76 676 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 PAAF1Q9BRP4 392 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 TTPALQ9BTX7 342 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 MAN1C1Q9NR34 630 aa21.03■□□□□ 0.96
CTSA-217ENST00000607482 K7ENM7 598 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 LILRB3O75022 631 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 KIF4AO95239 1232 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 SCP2P22307 547 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 DDIT3P35638 169 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 LIG4P49917 911 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 NOLC1Q14978 699 aaKnown RBP eCLIP21.02■□□□□ 0.969e-12■■□□□ 12.5
CTSA-217ENST00000607482 ARSHQ5FYA8 562 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 HERC4Q5GLZ8 1057 aaPredicted RBP21.02■□□□□ 0.96
CTSA-217ENST00000607482 RRAGBQ5VZM2 374 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 KANK3Q6NY19 840 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 PDXDC1Q6P996 788 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 DCLRE1AQ6PJP8 1040 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 HAUS6Q7Z4H7 955 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 EPSTI1Q96J88 318 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 CCSER1Q9C0I3 900 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 PIDD1Q9HB75 910 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 CHST7Q9NS84 486 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 MTMR6Q9Y217 621 aa21.02■□□□□ 0.96
CTSA-217ENST00000607482 SRPRBQ9Y5M8 271 aaKnown RBP21.02■□□□□ 0.96
CTSA-217ENST00000607482 SMIM28A0A1B0GU29 152 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 PRR33A8MZF0 331 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 HNRNPDLO14979 420 aaKnown RBP21.01■□□□□ 0.95
CTSA-217ENST00000607482 SPATA31D3P0C874 917 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 ABCD1P33897 745 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 STK38Q15208 465 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 ZPBP2Q6X784 338 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 SPATA31D4Q6ZUB0 917 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 TAS1R3Q7RTX0 852 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 CEP120Q8N960 986 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 TDRD5Q8NAT2 981 aaKnown RBP21.01■□□□□ 0.95
CTSA-217ENST00000607482 SNX21Q969T3 373 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 ACSF2Q96CM8 615 aaPredicted RBP21.01■□□□□ 0.95
CTSA-217ENST00000607482 DDX27Q96GQ7 796 aaKnown RBP21.01■□□□□ 0.95
CTSA-217ENST00000607482 ZNF396Q96N95 335 aaPredicted RBP21.01■□□□□ 0.95
CTSA-217ENST00000607482 POMKQ9H5K3 350 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 RXFP1Q9HBX9 757 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 PTPRHQ9HD43 1115 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 CDH22Q9UJ99 828 aa21.01■□□□□ 0.95
CTSA-217ENST00000607482 TRAK2O60296 914 aa21■□□□□ 0.95
CTSA-217ENST00000607482 RPL17P18621 184 aaKnown RBP21■□□□□ 0.95
CTSA-217ENST00000607482 CLCNKBP51801 687 aa21■□□□□ 0.95
CTSA-217ENST00000607482 ZBTB45Q96K62 511 aaPredicted RBP21■□□□□ 0.95
CTSA-217ENST00000607482 CLIC6Q96NY7 704 aa21■□□□□ 0.95
CTSA-217ENST00000607482 CXCL16Q9H2A7 254 aa21■□□□□ 0.95
CTSA-217ENST00000607482 FNIP2Q9P278 1114 aa21■□□□□ 0.95
CTSA-217ENST00000607482 STK17AQ9UEE5 414 aa21■□□□□ 0.95
CTSA-217ENST00000607482 FBXO2Q9UK22 296 aaPredicted RBP21■□□□□ 0.95
CTSA-217ENST00000607482 NUB1Q9Y5A7 615 aa21■□□□□ 0.95
CTSA-217ENST00000607482 CCDC195A0A1B0GUA6 201 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 TULP1O00294 542 aaPredicted RBP20.99■□□□□ 0.95
CTSA-217ENST00000607482 PDIA4P13667 645 aaKnown RBP20.99■□□□□ 0.95
CTSA-217ENST00000607482 NCKAP1LP55160 1127 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 PTPAQ15257 358 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 PSMD5Q16401 504 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 FOXD4L5Q5VV16 416 aaPredicted RBP20.99■□□□□ 0.95
CTSA-217ENST00000607482 PRSS55Q6UWB4 352 aaPredicted RBP20.99■□□□□ 0.95
CTSA-217ENST00000607482 CCDC73Q6ZRK6 1079 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 CCDC149Q6ZUS6 474 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 SV2BQ7L1I2 683 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 GPR149Q86SP6 731 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 GPR65Q8IYL9 337 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 RNF168Q8IYW5 571 aaPredicted RBP20.99■□□□□ 0.95
CTSA-217ENST00000607482 FOXD4L4Q8WXT5 416 aaPredicted RBP20.99■□□□□ 0.95
CTSA-217ENST00000607482 EDAQ92838 391 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 PPP1R10Q96QC0 940 aaKnown RBP20.99■□□□□ 0.95
CTSA-217ENST00000607482 PLEKHA4Q9H4M7 779 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 BLOC1S4Q9NUP1 217 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 TBX20Q9UMR3 447 aa20.99■□□□□ 0.95
CTSA-217ENST00000607482 PROZP22891 400 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 STAT6P42226 847 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 SLC39A14Q15043 492 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 KYAT1Q16773 422 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 SEZ6Q53EL9 994 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 RTP2Q5QGT7 225 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 LIN9Q5TKA1 542 aa20.98■□□□□ 0.95
CTSA-217ENST00000607482 OTOP3Q7RTS5 596 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms