RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SPTLC2O15270 562 aa24.74■■□□□ 1.55
CCDC9-204ENST00000599398 TRAK2O60296 914 aa24.74■■□□□ 1.55
CCDC9-204ENST00000599398 ZNF131P52739 623 aa24.74■■□□□ 1.55
CCDC9-204ENST00000599398 NOLC1Q14978 699 aaKnown RBP eCLIP24.74■■□□□ 1.55
CCDC9-204ENST00000599398 ZPBP2Q6X784 338 aa24.74■■□□□ 1.55
CCDC9-204ENST00000599398 DYMQ7RTS9 669 aa24.74■■□□□ 1.55
CCDC9-204ENST00000599398 RNF168Q8IYW5 571 aaPredicted RBP24.74■■□□□ 1.55
CCDC9-204ENST00000599398 B3GALT6Q96L58 329 aa24.74■■□□□ 1.55
CCDC9-204ENST00000599398 ACAP3Q96P50 834 aa24.74■■□□□ 1.55
CCDC9-204ENST00000599398 S1PR5Q9H228 398 aa24.74■■□□□ 1.55
CCDC9-204ENST00000599398 SF3B1O75533 1304 aaKnown RBP eCLIP24.73■■□□□ 1.553e-6■■■■■ 44.6
CCDC9-204ENST00000599398 SPDYE4A6NLX3 237 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 CLDN3O15551 220 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 LILRB3O75022 631 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 BRD1O95696 1058 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 EFEMP2O95967 443 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 F13A1P00488 732 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 STAT6P42226 847 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 NAB2Q15742 525 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 USP41Q3LFD5 358 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 CCDC73Q6ZRK6 1079 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 SV2BQ7L1I2 683 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 SLC22A17Q8WUG5 538 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 DZANK1Q9NVP4 752 aa24.73■■□□□ 1.55
CCDC9-204ENST00000599398 KIF4AO95239 1232 aa24.72■■□□□ 1.55
CCDC9-204ENST00000599398 LIG4P49917 911 aa24.72■■□□□ 1.55
CCDC9-204ENST00000599398 DSG1Q02413 1049 aa24.72■■□□□ 1.55
CCDC9-204ENST00000599398 KIAA0319Q5VV43 1072 aa24.72■■□□□ 1.55
CCDC9-204ENST00000599398 CES5AQ6NT32 575 aa24.72■■□□□ 1.55
CCDC9-204ENST00000599398 SUSD6Q92537 303 aa24.72■■□□□ 1.55
CCDC9-204ENST00000599398 KHSRPQ92945 711 aaKnown RBP eCLIP24.72■■□□□ 1.55
CCDC9-204ENST00000599398 PPP1R10Q96QC0 940 aaKnown RBP24.72■■□□□ 1.55
CCDC9-204ENST00000599398 TBX20Q9UMR3 447 aa24.72■■□□□ 1.55
CCDC9-204ENST00000599398 SMIM28A0A1B0GU29 152 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 C19orf67A6NJJ6 358 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 HNRNPDLO14979 420 aaKnown RBP24.71■■□□□ 1.55
CCDC9-204ENST00000599398 PPP6R2O75170 966 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 YEATS4O95619 227 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 ADH1AP07327 375 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 SCP2P22307 547 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 NMT1P30419 496 aaKnown RBP24.71■■□□□ 1.55
CCDC9-204ENST00000599398 CLCN4P51793 760 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 PKP1Q13835 747 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 CBX2Q14781 532 aaPredicted RBP24.71■■□□□ 1.55
CCDC9-204ENST00000599398 SEZ6Q53EL9 994 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 RARS2Q5T160 578 aaKnown RBP24.71■■□□□ 1.55
CCDC9-204ENST00000599398 PDILTQ8N807 584 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 C12orf76Q8N812 135 aaPredicted RBP24.71■■□□□ 1.55
CCDC9-204ENST00000599398 RIN2Q8WYP3 895 aaPredicted RBP24.71■■□□□ 1.55
CCDC9-204ENST00000599398 DDX12PQ92771 950 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 SNX27Q96L92 541 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 CHST7Q9NS84 486 aa24.71■■□□□ 1.55
CCDC9-204ENST00000599398 TEX28O15482 410 aa24.7■■□□□ 1.54
CCDC9-204ENST00000599398 ITIH3Q06033 890 aa24.7■■□□□ 1.54
CCDC9-204ENST00000599398 MCL1Q07820 350 aa24.7■■□□□ 1.54
CCDC9-204ENST00000599398 ALKAL1Q6UXT8 129 aa24.7■■□□□ 1.54
CCDC9-204ENST00000599398 CEP57Q86XR8 500 aa24.7■■□□□ 1.54
CCDC9-204ENST00000599398 FBXL18Q96ME1 805 aa24.7■■□□□ 1.54
CCDC9-204ENST00000599398 PHF7Q9BWX1 381 aaPredicted RBP24.7■■□□□ 1.54
CCDC9-204ENST00000599398 EPHX3Q9H6B9 360 aa24.7■■□□□ 1.54
CCDC9-204ENST00000599398 GOLGA2P5Q9HBQ8 144 aa24.7■■□□□ 1.54
CCDC9-204ENST00000599398 CDH22Q9UJ99 828 aa24.7■■□□□ 1.54
CCDC9-204ENST00000599398 A0A087X0B3 334 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 MYMKA6NI61 221 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 CLCNKBP51801 687 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 XKR4Q5GH76 650 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 FAM171A1Q5VUB5 890 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 SFR1Q86XK3 245 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 GLYCTKQ8IVS8 523 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 KCNN1Q92952 543 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 RPGRIP1Q96KN7 1286 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 UROC1Q96N76 676 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 ADAM7Q9H2U9 754 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 SLC38A7Q9NVC3 462 aa24.69■■□□□ 1.54
CCDC9-204ENST00000599398 B3GAT3O94766 335 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 WEE2P0C1S8 567 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 ABCD1P33897 745 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 ELAVL2Q12926 359 aaKnown RBP24.68■■□□□ 1.54
CCDC9-204ENST00000599398 KANK3Q6NY19 840 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 ZMAT2Q96NC0 199 aaKnown RBP24.68■■□□□ 1.54
CCDC9-204ENST00000599398 FIZ1Q96SL8 496 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 TTPALQ9BTX7 342 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 HAPLN2Q9GZV7 340 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 RXFP1Q9HBX9 757 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.68■■□□□ 1.54
CCDC9-204ENST00000599398 CNTN3Q9P232 1028 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 PLXNA3P51805 1871 aa24.68■■□□□ 1.54
CCDC9-204ENST00000599398 CUTAO60888 179 aa24.67■■□□□ 1.54
CCDC9-204ENST00000599398 GLUD1P00367 558 aa24.67■■□□□ 1.54
CCDC9-204ENST00000599398 KCNE1P15382 129 aa24.67■■□□□ 1.54
CCDC9-204ENST00000599398 GTF2BQ00403 316 aa24.67■■□□□ 1.54
CCDC9-204ENST00000599398 CREMQ03060 361 aa24.67■■□□□ 1.54
CCDC9-204ENST00000599398 SOX4Q06945 474 aaPredicted RBP24.67■■□□□ 1.54
CCDC9-204ENST00000599398 ZC2HC1CQ53FD0 456 aaPredicted RBP24.67■■□□□ 1.54
CCDC9-204ENST00000599398 RTP2Q5QGT7 225 aa24.67■■□□□ 1.54
CCDC9-204ENST00000599398 DCLRE1AQ6PJP8 1040 aa24.67■■□□□ 1.54
CCDC9-204ENST00000599398 PRSS55Q6UWB4 352 aaPredicted RBP24.67■■□□□ 1.54
CCDC9-204ENST00000599398 TMC5Q6UXY8 1006 aa24.67■■□□□ 1.54
CCDC9-204ENST00000599398 C1QTNF1Q9BXJ1 281 aa24.67■■□□□ 1.54
CCDC9-204ENST00000599398 SFXN1Q9H9B4 322 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms