RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CXCL8P10145 99 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 DLATP10515 647 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 GHRP10912 638 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 SELPP16109 830 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 SLC9A1P19634 815 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 CD52P31358 61 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 CASP14P31944 242 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 FXR1P51114 621 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 AP3M2P53677 418 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 OSTNP61366 133 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 BFSP2Q13515 415 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 SLC10A6Q3KNW5 377 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 KRT39Q6A163 491 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 SV2AQ7L0J3 742 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 PPFIBP1Q86W92 1011 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 WDR49Q8IV35 697 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 CCDC150Q8NCX0 1101 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 EHBP1Q8NDI1 1231 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 TMEM106CQ9BVX2 250 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 CCDC94Q9BW85 323 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 TMX1Q9H3N1 280 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 ASB7Q9H672 318 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 C11orf49Q9H6J7 331 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 MMRN2Q9H8L6 949 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 GCNT4Q9P109 453 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 CAPN11Q9UMQ6 739 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 SCN1AP35498 2009 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 LACTBL1A8MY62 500 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 AKR1B15C9JRZ8 316 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 PITPNM1O00562 1244 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 PQBP1O60828 265 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 MFAP3LO75121 409 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 ATN1P54259 1190 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 TLE2Q04725 743 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 GOLGA8FQ08AF8 430 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 GOLGA8DPQ0D2H9 430 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 PAK2Q13177 524 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 ZACNQ401N2 412 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 TRIM60Q495X7 471 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 KLHDC7AQ5VTJ3 777 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 LMBRD2Q68DH5 695 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 LRRC8DQ7L1W4 858 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 EFCAB13Q8IY85 973 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 NEK11Q8NG66 645 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 OR5B17Q8NGF7 314 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 CACTINQ8WUQ7 758 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 FAM84AQ96KN4 292 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 PCMTD1Q96MG8 357 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 ACAP3Q96P50 834 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 FNBP1Q96RU3 617 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 TRAIPQ9BWF2 469 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 INTS2Q9H0H0 1204 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 KCNF1Q9H3M0 494 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 FAM207AQ9NSI2 230 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 FBXL5Q9UKA1 691 aa15.96■□□□□ 0.15
SHKBP1-211ENST00000595945 MICAL3Q7RTP6 2002 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 VNN1O95497 513 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 ACTN1P12814 892 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 TNNI1P19237 187 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 TRIM21P19474 475 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 FECHP22830 423 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 APBA1Q02410 837 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 FAAP100Q0VG06 881 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 CETN1Q12798 172 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 GPNMBQ14956 572 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 TDRD10Q5VZ19 366 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 TRIM65Q6PJ69 517 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 ALKAL1Q6UXT8 129 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 CD302Q8IX05 232 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 SMG8Q8ND04 991 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 BAP1Q92560 729 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 SEMA4DQ92854 862 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 PAWRQ96IZ0 340 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 SNX27Q96L92 541 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 NXF3Q9H4D5 531 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 PLEKHA5Q9HAU0 1116 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 SNTG2Q9NY99 539 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 CEP72Q9P209 647 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 DAAM1Q9Y4D1 1078 aa15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 TDRD15B5MCY1 1934 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-211ENST00000595945 TTC3P53804 2025 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 DCDC2CA8MYV0 355 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 MGEA5O60502 916 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 LRRN2O75325 713 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 ADKP55263 362 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 ZBED6P86452 979 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 NFX1Q12986 1120 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 XKR4Q5GH76 650 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 TWF2Q6IBS0 349 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 FAM43BQ6ZT52 329 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 UBE2Q1Q7Z7E8 422 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 MRPL10Q7Z7H8 261 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 CNGA4Q8IV77 575 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 LRRC8AQ8IWT6 810 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 FBXL13Q8NEE6 735 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 TAS1R2Q8TE23 839 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 CPLX3Q8WVH0 158 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 PANX2Q96RD6 677 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 DNAJC7Q99615 494 aa15.94■□□□□ 0.14
SHKBP1-211ENST00000595945 NAA15Q9BXJ9 866 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms