RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 ZFC3H1O60293 1989 aaKnown RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 ATRQ13535 2644 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 PLXND1Q9Y4D7 1925 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 PNMA6EA0A0J9YXQ4 647 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 SMIM35A0A1B0GVV1 85 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 GSTTP1A0A1W2PQM5 241 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 ANO9A1A5B4 782 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 WDR27A2RRH5 827 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 CARNS1A5YM72 827 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 ANTXRLA6NF34 631 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 HEPACAM2A8MVW5 462 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 E9PAM4 449 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 TNFRSF10BO14763 440 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 NRP1O14786 923 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 OPLAHO14841 1288 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 ADAM12O43184 909 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 XYLBO75191 536 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 EGFP01133 1207 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 VTNP04004 478 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 SERPINF2P08697 491 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 HNRNPA1P09651 372 aaKnown RBP eCLIP3.53□□□□□ -1.84
VRK3-204ENST00000593912 TGFB3P10600 412 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 HSPD1P10809 573 aaKnown RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 ZSCAN20P17040 1043 aaPredicted RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 GJA1P17302 382 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 U2AF2P26368 475 aaKnown RBP eCLIP3.53□□□□□ -1.84
VRK3-204ENST00000593912 HOXA13P31271 388 aaPredicted RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 CCR2P41597 374 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 TFAP4Q01664 338 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 TNK2Q07912 1038 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 SLC14A1Q13336 389 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 DMC1Q14565 340 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 SKIDA1Q1XH10 827 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 LINC00303Q3SY05 128 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 C6orf118Q5T5N4 469 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 BROXQ5VW32 411 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 C1QL3Q5VWW1 255 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 PEAR1Q5VY43 1037 aaPredicted RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 NAIF1Q69YI7 327 aaPredicted RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 MTHFD1LQ6UB35 978 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 USP49Q70CQ1 688 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 LPCAT2Q7L5N7 544 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 TTC30AQ86WT1 665 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 RALGPS2Q86X27 583 aaPredicted RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 PTRH1Q86Y79 214 aaKnown RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 ARID3BQ8IVW6 561 aaPredicted RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 RNF168Q8IYW5 571 aaPredicted RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 KIAA0319LQ8IZA0 1049 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 ZNF710Q8N1W2 664 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 SYNPOQ8N3V7 929 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 MRPL50Q8N5N7 158 aaKnown RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 RGS22Q8NE09 1264 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 NEDD1Q8NHV4 660 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 RPLP0P6Q8NHW5 317 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 DCAF4Q8WV16 495 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 MBOAT7Q96N66 472 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 PNMA5Q96PV4 448 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 PCYT2Q99447 389 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 PI4K2AQ9BTU6 479 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 FBRSL1Q9HCM7 1045 aaKnown RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 IL17RBQ9NRM6 502 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 ERAP1Q9NZ08 941 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 RTEL1Q9NZ71 1219 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 ARPP21Q9UBL0 812 aaPredicted RBP3.53□□□□□ -1.84
VRK3-204ENST00000593912 EBF1Q9UH73 591 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 KCNH3Q9ULD8 1083 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 FAN1Q9Y2M0 1017 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 PCDHA1Q9Y5I3 950 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 LRRK1Q38SD2 2015 aa3.53□□□□□ -1.84
VRK3-204ENST00000593912 TMEM131Q92545 1883 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 A0A0U1RQF3 1178 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 WIPF3A6NGB9 483 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 RRN3P2A6NIE6 340 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 GOLIM4O00461 696 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 TRIM66O15016 1216 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 KLK10O43240 276 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 ATG13O75143 517 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 GPR32O75388 356 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 CSDE1O75534 798 aaKnown RBP3.52□□□□□ -1.85
VRK3-204ENST00000593912 OFD1O75665 1012 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 EFEMP2O95967 443 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 POMCP01189 267 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 RPLP2P05387 115 aaKnown RBP3.52□□□□□ -1.85
VRK3-204ENST00000593912 FAM87AP0C7U9 286 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 JUPP14923 745 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 KLRC1P26715 233 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 CCND2P30279 289 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 CRYBB1P53674 252 aaPredicted RBP3.52□□□□□ -1.85
VRK3-204ENST00000593912 UCNP55089 124 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 MRPS9P82933 396 aaKnown RBP3.52□□□□□ -1.85
VRK3-204ENST00000593912 GRIK2Q13002 908 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 TARDBPQ13148 414 aaKnown RBP eCLIP3.52□□□□□ -1.85
VRK3-204ENST00000593912 NEDD9Q14511 834 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 RTP5Q14D33 572 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 TBC1D25Q3MII6 688 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 SBK1Q52WX2 424 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 PRSS36Q5K4E3 855 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 ODR4Q5SWX8 454 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 GLB1LQ6UWU2 654 aa3.52□□□□□ -1.85
VRK3-204ENST00000593912 C11orf74Q86VG3 221 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms