RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 ARHGAP10A1A4S6 786 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 RNF225M0QZC1 329 aaPredicted RBP3.75□□□□□ -1.81
VMP1-216ENST00000592790 MEIS1O00470 390 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CASQ2O14958 399 aaPredicted RBP3.75□□□□□ -1.81
VMP1-216ENST00000592790 OPHN1O60890 802 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 IFNB1P01574 187 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 FDX1P10109 184 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 COMTP21964 271 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CYP3A7P24462 503 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 PTPN4P29074 926 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 MCL1Q07820 350 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 ZNF211Q13398 564 aaPredicted RBP3.75□□□□□ -1.81
VMP1-216ENST00000592790 SNX1Q13596 522 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CUL3Q13618 768 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 ACVR2BQ13705 512 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 GIT2Q14161 759 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 DIXDC1Q155Q3 683 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 PTPROQ16827 1216 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 ASTE1Q2TB18 679 aaPredicted RBP3.75□□□□□ -1.81
VMP1-216ENST00000592790 XKR9Q5GH70 373 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 FSCBQ5H9T9 825 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 FAM102BQ5T8I3 360 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 HGSNATQ68CP4 663 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 C15orf52Q6ZUT6 534 aaKnown RBP3.75□□□□□ -1.81
VMP1-216ENST00000592790 KCTD1Q719H9 257 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 MFN1Q8IWA4 741 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CACTIN-AS1Q8N1I8 211 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 TTC39CQ8N584 583 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 TLCD1Q96CP7 247 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 FAM163AQ96GL9 167 aaPredicted RBP3.75□□□□□ -1.81
VMP1-216ENST00000592790 RIT2Q99578 217 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 SIKE1Q9BRV8 207 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 TCHPQ9BT92 498 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 EHD4Q9H223 541 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 JMJD4Q9H9V9 463 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 PARVAQ9NVD7 372 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 LRP6O75581 1613 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 MYH8P13535 1937 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CHD4Q14839 1912 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 RGPD2P0DJD1 1756 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 ARHGAP42A6NI28 874 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 SLC37A4O43826 429 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 AHCYL1O43865 530 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 ECE1P42892 770 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 VPS41P49754 854 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 KRT76Q01546 638 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 KCNMA1Q12791 1236 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 PTK6Q13882 451 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 SEPT6Q14141 434 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 KIF22Q14807 665 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CCNG2Q16589 344 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 SPDYAQ5MJ70 313 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 IRGCQ6NXR0 463 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 PADI6Q6TGC4 694 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 BZW1Q7L1Q6 419 aaKnown RBP3.75□□□□□ -1.81
VMP1-216ENST00000592790 SLFN11Q7Z7L1 901 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 SESTD1Q86VW0 696 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 TMEM35BQ8NCS4 154 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 RDM1Q8NG50 284 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 FBXO25Q8TCJ0 367 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CKAP2Q8WWK9 683 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CCT6BQ92526 530 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 MAML3Q96JK9 1138 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 RBM15Q96T37 977 aaKnown RBP eCLIP3.75□□□□□ -1.819e-6■□□□□ 8.2
VMP1-216ENST00000592790 CYTH2Q99418 400 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 MTRQ99707 1265 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CELF4Q9BZC1 486 aaKnown RBP3.75□□□□□ -1.81
VMP1-216ENST00000592790 OSBPL8Q9BZF1 889 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 TMEM8AQ9HCN3 771 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 AVENQ9NQS1 362 aaPredicted RBP3.75□□□□□ -1.81
VMP1-216ENST00000592790 ADAM22Q9P0K1 906 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 EPS15L1Q9UBC2 864 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 TBK1Q9UHD2 729 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 LRCH1Q9Y2L9 728 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 PCDHB4Q9Y5E5 795 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 PCDHA3Q9Y5H8 950 aa3.75□□□□□ -1.81
VMP1-216ENST00000592790 CFAP69A5D8W1 941 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 USP17L10C9JJH3 530 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 COPEO14579 308 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ZNF263O14978 683 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 HNRNPDLO14979 420 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 UBOX5O94941 541 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TNNC2P02585 160 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SREBF1P36956 1147 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 MAGEA4P43358 317 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SESN3P58005 492 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 MORF4L2Q15014 288 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 MTFR1Q15390 333 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ZC3H12AQ5D1E8 599 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 ACAD10Q6JQN1 1059 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ZNF449Q6P9G9 518 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 HHIPL2Q6UWX4 724 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 PDZD4Q76G19 769 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 PODNQ7Z5L7 613 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ZC3H18Q86VM9 953 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 LONP2Q86WA8 852 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SLC9A9Q8IVB4 645 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CTAGE3PQ8IX95 158 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 KIRREL3Q8IZU9 778 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 MAB21L3Q8N8X9 362 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms