RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 DPF3Q92784 378 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 TRAIPQ9BWF2 469 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 PARP2Q9UGN5 583 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 STX10O60499 249 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 PSMD6Q15008 389 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 VWA3BQ502W6 1294 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 RPUSD2Q8IZ73 545 aaKnown RBP24.55■■□□□ 1.52
ACTN4-210ENST00000588618 TMC2Q8TDI7 906 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 PARD3BQ8TEW8 1205 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 POP1Q99575 1024 aaKnown RBP24.55■■□□□ 1.52
ACTN4-210ENST00000588618 RGS18Q9NS28 235 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 C1orf112Q9NSG2 853 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 A0A0U1RQF3 1178 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 LGALS16A8MUM7 142 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 IL18RAPO95256 599 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 TNNI1P19237 187 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 TCTN1Q2MV58 587 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 SLC24A5Q71RS6 500 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 VWCEQ96DN2 955 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 NDST4Q9H3R1 872 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 PDE11AQ9HCR9 933 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 PTPRJQ12913 1337 aa24.54■■□□□ 1.52
ACTN4-210ENST00000588618 PDCD11Q14690 1871 aaKnown RBP24.54■■□□□ 1.52
ACTN4-210ENST00000588618 LRRIQ3A6PVS8 624 aaPredicted RBP24.53■■□□□ 1.52
ACTN4-210ENST00000588618 ITGA4P13612 1032 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 CSF2RAP15509 400 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 ENPEPQ07075 957 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 KCNH2Q12809 1159 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 FKBP15Q5T1M5 1219 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 RNF169Q8NCN4 708 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 SMG8Q8ND04 991 aaKnown RBP24.53■■□□□ 1.52
ACTN4-210ENST00000588618 LINC01599Q8WXQ3 324 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 PGBD4Q96DM1 585 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 CXCL16Q9H2A7 254 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 TSPYL2Q9H2G4 693 aaPredicted RBP24.53■■□□□ 1.52
ACTN4-210ENST00000588618 RNF39Q9H2S5 420 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 MMRN2Q9H8L6 949 aa24.53■■□□□ 1.52
ACTN4-210ENST00000588618 RECQL4O94761 1208 aa24.52■■□□□ 1.52
ACTN4-210ENST00000588618 AFPP02771 609 aaKnown RBP24.52■■□□□ 1.52
ACTN4-210ENST00000588618 PFKMP08237 780 aa24.52■■□□□ 1.52
ACTN4-210ENST00000588618 AKAP5P24588 427 aa24.52■■□□□ 1.52
ACTN4-210ENST00000588618 PPP3CAQ08209 521 aa24.52■■□□□ 1.52
ACTN4-210ENST00000588618 CNKSR3Q6P9H4 555 aa24.52■■□□□ 1.52
ACTN4-210ENST00000588618 RTN4RL1Q86UN2 441 aaPredicted RBP24.52■■□□□ 1.52
ACTN4-210ENST00000588618 CD302Q8IX05 232 aa24.52■■□□□ 1.52
ACTN4-210ENST00000588618 PLEKHA5Q9HAU0 1116 aa24.52■■□□□ 1.52
ACTN4-210ENST00000588618 IKBKEQ14164 716 aa24.52■■□□□ 1.52
ACTN4-210ENST00000588618 ASB7Q9H672 318 aa24.52■■□□□ 1.52
ACTN4-210ENST00000588618 ZNF623O75123 536 aa24.51■■□□□ 1.51
ACTN4-210ENST00000588618 UBXN1Q04323 297 aa24.51■■□□□ 1.51
ACTN4-210ENST00000588618 CETN1Q12798 172 aa24.51■■□□□ 1.51
ACTN4-210ENST00000588618 SLC10A6Q3KNW5 377 aa24.51■■□□□ 1.51
ACTN4-210ENST00000588618 CBWD6Q4V339 395 aa24.51■■□□□ 1.51
ACTN4-210ENST00000588618 CBWD3Q5JTY5 395 aa24.51■■□□□ 1.51
ACTN4-210ENST00000588618 CBWD5Q5RIA9 395 aa24.51■■□□□ 1.51
ACTN4-210ENST00000588618 LMBRD2Q68DH5 695 aaPredicted RBP24.51■■□□□ 1.51
ACTN4-210ENST00000588618 MRFAP1L1Q96HT8 127 aa24.51■■□□□ 1.51
ACTN4-210ENST00000588618 RNF216Q9NWF9 866 aaPredicted RBP24.51■■□□□ 1.51
ACTN4-210ENST00000588618 MICAL3Q7RTP6 2002 aa24.51■■□□□ 1.51
ACTN4-210ENST00000588618 MEIS3P2A8K0S8 358 aa24.5■■□□□ 1.51
ACTN4-210ENST00000588618 N4BP1O75113 896 aaKnown RBP24.5■■□□□ 1.51
ACTN4-210ENST00000588618 PBX1P40424 430 aa24.5■■□□□ 1.51
ACTN4-210ENST00000588618 CLDN10P78369 228 aa24.5■■□□□ 1.51
ACTN4-210ENST00000588618 PPIGQ13427 754 aaKnown RBP eCLIP24.5■■□□□ 1.513e-8■■□□□ 12.9
ACTN4-210ENST00000588618 ECHDC2Q86YB7 292 aa24.5■■□□□ 1.51
ACTN4-210ENST00000588618 ZNF516Q92618 1163 aa24.5■■□□□ 1.51
ACTN4-210ENST00000588618 CGRRF1Q99675 332 aa24.5■■□□□ 1.51
ACTN4-210ENST00000588618 LACTBL1A8MY62 500 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 WDR49Q8IV35 697 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 SNX27Q96L92 541 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 UBN1Q9NPG3 1134 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 LAMA2P24043 3122 aaKnown RBP24.49■■□□□ 1.51
ACTN4-210ENST00000588618 TTC26A0AVF1 554 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 C9IYK1 514 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 ENPP3O14638 875 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 EOMESO95936 686 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 TMEM191BP0C7N4 346 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 ACTN1P12814 892 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 ATF7P17544 494 aaPredicted RBP24.49■■□□□ 1.51
ACTN4-210ENST00000588618 GTF2H1P32780 548 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 GCLMP48507 274 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 AP3M2P53677 418 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 TFAMQ00059 246 aaKnown RBP24.49■■□□□ 1.51
ACTN4-210ENST00000588618 FPGSQ05932 587 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 MRPL10Q7Z7H8 261 aaKnown RBP24.49■■□□□ 1.51
ACTN4-210ENST00000588618 EFCAB13Q8IY85 973 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 BADQ92934 168 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 RPS6KC1Q96S38 1066 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 KLK14Q9P0G3 267 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 LRFN2Q9ULH4 789 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 GIT1Q9Y2X7 761 aa24.49■■□□□ 1.51
ACTN4-210ENST00000588618 SYN1P17600 705 aa24.48■■□□□ 1.51
ACTN4-210ENST00000588618 FMO5P49326 533 aa24.48■■□□□ 1.51
ACTN4-210ENST00000588618 MXI1P50539 228 aa24.48■■□□□ 1.51
ACTN4-210ENST00000588618 SCARA3Q6AZY7 606 aa24.48■■□□□ 1.51
ACTN4-210ENST00000588618 TMEM130Q8N3G9 435 aa24.48■■□□□ 1.51
ACTN4-210ENST00000588618 OR5B17Q8NGF7 314 aa24.48■■□□□ 1.51
ACTN4-210ENST00000588618 CACTINQ8WUQ7 758 aaKnown RBP24.48■■□□□ 1.51
ACTN4-210ENST00000588618 LPPQ93052 612 aa24.48■■□□□ 1.51
ACTN4-210ENST00000588618 ANKRD36BP1Q96IX9 119 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms