RNA–Protein interactions for RNA: ENST00000585714.1

ABCA9-208, Transcript of ATP binding cassette subfamily A member 9, human

TSL 4

Gene ABCA9, Length 582 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA9-208	ENST00000585714	CDC42EP1	Q00587	391 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	DUSP2	Q05923	314 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	MAP9	Q49MG5	647 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	THEMIS2	Q5TEJ8	643 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	KRT40	Q6A162	431 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	CHST15	Q7LFX5	561 aa	Predicted RBP	6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	OVCH2	Q7RTZ1	564 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	DRC7	Q8IY82	874 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	CAMKK1	Q8N5S9	505 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	RABGGTA	Q92696	567 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	RPL10L	Q96L21	214 aa	Known RBP	6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	KMT5A	Q9NQR1	393 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	TDP1	Q9NUW8	608 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	SYNJ1	O43426	1573 aa		6.6	□□□□□ -1.35
ABCA9-208	ENST00000585714	PMS2P1	A4D2B8	440 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	NRP1	O14786	923 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	SLC16A6	O15403	523 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	ITGA10	O75578	1167 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	UBXN7	O94888	489 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	MAP4K4	O95819	1239 aa	Predicted RBP	6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	ALDH2	P05091	517 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	MYB	P10242	640 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	HMGA2	P52926	109 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	TARDBP	Q13148	414 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	GALE	Q14376	348 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	ZFPM1	Q8IX07	1006 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	CFHR4	Q92496	578 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	RGMA	Q96B86	450 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	WWC2-AS2	Q96NR7	200 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	DMRTA2	Q96SC8	542 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	UHRF1	Q96T88	793 aa	Predicted RBP	6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	GPHA2	Q96T91	129 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	CGRRF1	Q99675	332 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	PTPN18	Q99952	460 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	PDCD2L	Q9BRP1	358 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	ZNF747	Q9BV97	191 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	MAN1C1	Q9NR34	630 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714	LANCL2	Q9NS86	450 aa		6.59	□□□□□ -1.35
ABCA9-208	ENST00000585714		A6NNZ2	444 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	ADCY6	O43306	1168 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	B3GALT2	O43825	422 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	CNOT4	O95628	575 aa	Known RBP	6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	TRIM27	P14373	513 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	IL12RB1	P42701	662 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	MAP2K6	P52564	334 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	PPP2CB	P62714	309 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	PPP2CA	P67775	309 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	PURA	Q00577	322 aa	Known RBP	6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	ZNF585A	Q6P3V2	769 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	KSR2	Q6VAB6	950 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	SRGAP1	Q7Z6B7	1085 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	CIR1	Q86X95	450 aa	Predicted RBP	6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	TRMT2A	Q8IZ69	625 aa	Known RBP	6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	CMTM4	Q8IZR5	234 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	CCHCR1	Q8TD31	782 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	TTC17	Q96AE7	1141 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	CLPTM1L	Q96KA5	538 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	MRGPRX4	Q96LA9	322 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	CDK5RAP1	Q96SZ6	601 aa	Known RBP	6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	SARG	Q9BW04	601 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	MRI	Q9BWK5	157 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	ENKD1	Q9H0I2	346 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	TMEM60	Q9H2L4	133 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	LDAH	Q9H6V9	325 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	FAM204A	Q9H8W3	233 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	PUF60	Q9UHX1	559 aa	Known RBP	6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	POLH	Q9Y253	713 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	CLASP1	Q7Z460	1538 aa		6.58	□□□□□ -1.36
ABCA9-208	ENST00000585714	KIF13A	Q9H1H9	1805 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	TOPBP1	Q92547	1522 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	OVOL3	O00110	214 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	MATN2	O00339	956 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	CYR61	O00622	381 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	SLC26A4	O43511	780 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	FTL	P02792	175 aa	Predicted RBP	6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	AMY1A	P04745	511 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	GUCY1A2	P33402	732 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	CASR	P41180	1078 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	HK3	P52790	923 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	USP14	P54578	494 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	RAC3	P60763	192 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	RAB39A	Q14964	217 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	R3HDM1	Q15032	1099 aa	Known RBP	6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	PDZD4	Q76G19	769 aa	Predicted RBP	6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	ADGRE4P	Q86SQ3	457 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	RSPH3	Q86UC2	560 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	PALM2	Q8IXS6	379 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	FAM43A	Q8N2R8	423 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	C3orf20	Q8ND61	904 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	REPS2	Q8NFH8	660 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	OR5M3	Q8NGP4	307 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	RAB24	Q969Q5	203 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	CDC5L	Q99459	802 aa	Known RBP	6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	LRFN3	Q9BTN0	628 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	SENP6	Q9GZR1	1112 aa	Predicted RBP	6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	CALCOCO1	Q9P1Z2	691 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	NCDN	Q9UBB6	729 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	WDR97	A6NE52	1622 aa		6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	TARBP1	Q13395	1621 aa	Known RBP	6.57	□□□□□ -1.36
ABCA9-208	ENST00000585714	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms