RNA–Protein interactions for RNA: ENST00000585714.1

ABCA9-208, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 4

Gene ABCA9, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-208ENST00000585714 AEBP2Q6ZN18 517 aaPredicted RBP30.22■■■□□ 2.43
ABCA9-208ENST00000585714 CHIC1Q5VXU3 224 aa28.68■■■□□ 2.18
ABCA9-208ENST00000585714 SENP3Q9H4L4 574 aaPredicted RBP25.7■■□□□ 1.7
ABCA9-208ENST00000585714 PHF23Q9BUL5 403 aaPredicted RBP25.39■■□□□ 1.66
ABCA9-208ENST00000585714 FOXD1Q16676 465 aa24■■□□□ 1.43
ABCA9-208ENST00000585714 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
ABCA9-208ENST00000585714 PPP6R1Q9UPN7 881 aa22.48■■□□□ 1.19
ABCA9-208ENST00000585714 PIAS4Q8N2W9 510 aaPredicted RBP22.4■■□□□ 1.18
ABCA9-208ENST00000585714 MSH5O43196 834 aa22.39■■□□□ 1.17
ABCA9-208ENST00000585714 ADRA2BP18089 450 aa22.39■■□□□ 1.17
ABCA9-208ENST00000585714 POTEDQ86YR6 584 aa21.85■■□□□ 1.09
ABCA9-208ENST00000585714 MAPK8IP2Q13387 824 aaPredicted RBP20.57■□□□□ 0.88
ABCA9-208ENST00000585714 DMRT2Q9Y5R5 561 aa20.41■□□□□ 0.86
ABCA9-208ENST00000585714 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
ABCA9-208ENST00000585714 PPP4R3CPQ6ZMV5 832 aa20.1■□□□□ 0.81
ABCA9-208ENST00000585714 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
ABCA9-208ENST00000585714 HOXD11P31277 338 aaPredicted RBP19.67■□□□□ 0.74
ABCA9-208ENST00000585714 DCAF8L1A6NGE4 600 aa19.53■□□□□ 0.72
ABCA9-208ENST00000585714 RNF216Q9NWF9 866 aaPredicted RBP19.52■□□□□ 0.72
ABCA9-208ENST00000585714 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
ABCA9-208ENST00000585714 CACNB1Q02641 598 aaPredicted RBP19.19■□□□□ 0.66
ABCA9-208ENST00000585714 RNF39Q9H2S5 420 aa19.15■□□□□ 0.66
ABCA9-208ENST00000585714 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
ABCA9-208ENST00000585714 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
ABCA9-208ENST00000585714 C1QBPQ07021 282 aaKnown RBP18.84■□□□□ 0.61
ABCA9-208ENST00000585714 KCNA4P22459 653 aa18.74■□□□□ 0.59
ABCA9-208ENST00000585714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.59
ABCA9-208ENST00000585714 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
ABCA9-208ENST00000585714 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
ABCA9-208ENST00000585714 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
ABCA9-208ENST00000585714 CAPN15O75808 1086 aa18.02■□□□□ 0.48
ABCA9-208ENST00000585714 DSG3P32926 999 aa17.94■□□□□ 0.46
ABCA9-208ENST00000585714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
ABCA9-208ENST00000585714 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
ABCA9-208ENST00000585714 APLP2Q06481 763 aa17.76■□□□□ 0.43
ABCA9-208ENST00000585714 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
ABCA9-208ENST00000585714 SAMD1Q6SPF0 538 aaPredicted RBP17.7■□□□□ 0.42
ABCA9-208ENST00000585714 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
ABCA9-208ENST00000585714 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
ABCA9-208ENST00000585714 ABCB7O75027 752 aa17.63■□□□□ 0.41
ABCA9-208ENST00000585714 MYCNP04198 464 aaPredicted RBP17.61■□□□□ 0.41
ABCA9-208ENST00000585714 FOXD4L1Q9NU39 408 aa17.45■□□□□ 0.38
ABCA9-208ENST00000585714 POLA2Q14181 598 aa17.29■□□□□ 0.36
ABCA9-208ENST00000585714 ZBTB22O15209 634 aa17.27■□□□□ 0.36
ABCA9-208ENST00000585714 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
ABCA9-208ENST00000585714 POTEHQ6S545 545 aa17.11■□□□□ 0.33
ABCA9-208ENST00000585714 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
ABCA9-208ENST00000585714 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
ABCA9-208ENST00000585714 ZBTB12Q9Y330 459 aaPredicted RBP16.89■□□□□ 0.29
ABCA9-208ENST00000585714 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
ABCA9-208ENST00000585714 CHRDL2Q6WN34 429 aa16.72■□□□□ 0.27
ABCA9-208ENST00000585714 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
ABCA9-208ENST00000585714 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
ABCA9-208ENST00000585714 FBLN2P98095 1184 aa16.49■□□□□ 0.23
ABCA9-208ENST00000585714 MKRN4PQ13434 485 aaPredicted RBP16.47■□□□□ 0.23
ABCA9-208ENST00000585714 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
ABCA9-208ENST00000585714 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
ABCA9-208ENST00000585714 PITPNM1O00562 1244 aa16.4■□□□□ 0.22
ABCA9-208ENST00000585714 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
ABCA9-208ENST00000585714 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
ABCA9-208ENST00000585714 PIP4P2Q8N4L2 257 aa16.34■□□□□ 0.21
ABCA9-208ENST00000585714 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
ABCA9-208ENST00000585714 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
ABCA9-208ENST00000585714 SSUH2Q9Y2M2 353 aa16.22■□□□□ 0.19
ABCA9-208ENST00000585714 ZNF692Q9BU19 519 aaPredicted RBP16.21■□□□□ 0.19
ABCA9-208ENST00000585714 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
ABCA9-208ENST00000585714 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
ABCA9-208ENST00000585714 SP7Q8TDD2 431 aaPredicted RBP16.05■□□□□ 0.16
ABCA9-208ENST00000585714 HAX1O00165 279 aa16■□□□□ 0.15
ABCA9-208ENST00000585714 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
ABCA9-208ENST00000585714 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
ABCA9-208ENST00000585714 EVX2Q03828 476 aa15.88■□□□□ 0.13
ABCA9-208ENST00000585714 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
ABCA9-208ENST00000585714 CHADLQ6NUI6 762 aa15.8■□□□□ 0.12
ABCA9-208ENST00000585714 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
ABCA9-208ENST00000585714 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
ABCA9-208ENST00000585714 FARP1Q9Y4F1 1045 aaPredicted RBP15.56■□□□□ 0.08
ABCA9-208ENST00000585714 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
ABCA9-208ENST00000585714 GABBR2O75899 941 aa15.48■□□□□ 0.07
ABCA9-208ENST00000585714 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
ABCA9-208ENST00000585714 CD44P16070 742 aaKnown RBP15.45■□□□□ 0.06
ABCA9-208ENST00000585714 PROM2Q8N271 834 aa15.33■□□□□ 0.04
ABCA9-208ENST00000585714 MNX1P50219 401 aaPredicted RBP15.23■□□□□ 0.03
ABCA9-208ENST00000585714 ZNF579Q8NAF0 562 aaKnown RBP15.23■□□□□ 0.03
ABCA9-208ENST00000585714 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
ABCA9-208ENST00000585714 POTEIP0CG38 1075 aa15.19■□□□□ 0.02
ABCA9-208ENST00000585714 CLCN6P51797 869 aa15.18■□□□□ 0.02
ABCA9-208ENST00000585714 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
ABCA9-208ENST00000585714 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
ABCA9-208ENST00000585714 GALR2O43603 387 aaPredicted RBP15.05■□□□□ -0
ABCA9-208ENST00000585714 LHX8Q68G74 356 aa15.05■□□□□ -0
ABCA9-208ENST00000585714 PHF12Q96QT6 1004 aa15.05■□□□□ -0
ABCA9-208ENST00000585714 DCBLD2Q96PD2 775 aa15.03■□□□□ -0
ABCA9-208ENST00000585714 FKBP8Q14318 412 aa14.91□□□□□ -0.02
ABCA9-208ENST00000585714 MIER1Q8N108 512 aa14.91□□□□□ -0.02
ABCA9-208ENST00000585714 TSPYL2Q9H2G4 693 aaPredicted RBP14.89□□□□□ -0.03
ABCA9-208ENST00000585714 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
ABCA9-208ENST00000585714 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
ABCA9-208ENST00000585714 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
ABCA9-208ENST00000585714 RASEFQ8IZ41 740 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms