RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 FMO5P49326 533 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 YARSP54577 528 aaKnown RBP13.02□□□□□ -0.33
CCDC57-216ENST00000582885 DLG4P78352 724 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 FAM189BP81408 668 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 UBXN1Q04323 297 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 SLC10A6Q3KNW5 377 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 SEZ6Q53EL9 994 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 XKR4Q5GH76 650 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 COL13A1Q5TAT6 717 aaPredicted RBP13.02□□□□□ -0.33
CCDC57-216ENST00000582885 ALKAL1Q6UXT8 129 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 C15orf39Q6ZRI6 1047 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 WDR49Q8IV35 697 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 CCDC127Q96BQ5 260 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 CGRRF1Q99675 332 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 ADAM2Q99965 735 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 PPP1R12CQ9BZL4 782 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.33
CCDC57-216ENST00000582885 TMEM8AQ9HCN3 771 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 PDE11AQ9HCR9 933 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 DERAQ9Y315 318 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 IPPQ9Y573 584 aa13.02□□□□□ -0.33
CCDC57-216ENST00000582885 TRIM43BA6NCK2 446 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 C9IYK1 514 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 EOMESO95936 686 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 TRIM49P0CI25 452 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 TRIM49CP0CI26 452 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 CXCL8P10145 99 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 CCL23P55773 120 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 WNT7BP56706 349 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 OSTNP61366 133 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 PPP3CAQ08209 521 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 CETN1Q12798 172 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 MFSD5Q6N075 450 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 SLC24A5Q71RS6 500 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 RTN4RL1Q86UN2 441 aaPredicted RBP13.01□□□□□ -0.33
CCDC57-216ENST00000582885 VSTM4Q8IW00 320 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 TMEM192Q8IY95 271 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 DBF4BQ8NFT6 615 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 TRIM43Q96BQ3 446 aaPredicted RBP13.01□□□□□ -0.33
CCDC57-216ENST00000582885 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 SCLYQ96I15 445 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 PDLIM2Q96JY6 352 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 SNX27Q96L92 541 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 HTATIP2Q9BUP3 242 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 NXF3Q9H4D5 531 aaKnown RBP13.01□□□□□ -0.33
CCDC57-216ENST00000582885 UBN1Q9NPG3 1134 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 RNF216Q9NWF9 866 aaPredicted RBP13.01□□□□□ -0.33
CCDC57-216ENST00000582885 SNTG2Q9NY99 539 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 COQ4Q9Y3A0 265 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 C2CD2Q9Y426 696 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.01□□□□□ -0.33
CCDC57-216ENST00000582885 ITIH6Q6UXX5 1313 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 PTPRSQ13332 1948 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 SCN1AP35498 2009 aa13.01□□□□□ -0.33
CCDC57-216ENST00000582885 LACTBL1A8MY62 500 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 PES1O00541 588 aaKnown RBP13□□□□□ -0.33
CCDC57-216ENST00000582885 MEFVO15553 781 aaPredicted RBP13□□□□□ -0.33
CCDC57-216ENST00000582885 RECQL4O94761 1208 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 C4BPAP04003 597 aaKnown RBP13□□□□□ -0.33
CCDC57-216ENST00000582885 PFKMP08237 780 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 DLATP10515 647 aaKnown RBP13□□□□□ -0.33
CCDC57-216ENST00000582885 ITGA4P13612 1032 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 KCNE1P15382 129 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 RAG1P15918 1043 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 TNNI1P19237 187 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 MXI1P50539 228 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 DUOXA2Q1HG44 320 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 ZACNQ401N2 412 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 KRT39Q6A163 491 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 CNKSR3Q6P9H4 555 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 GBP6Q6ZN66 633 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 SV2AQ7L0J3 742 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 ZNF598Q86UK7 904 aaKnown RBP13□□□□□ -0.33
CCDC57-216ENST00000582885 ECHDC2Q86YB7 292 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 TMEM199Q8N511 208 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 CACTINQ8WUQ7 758 aaKnown RBP13□□□□□ -0.33
CCDC57-216ENST00000582885 ZNF516Q92618 1163 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 IQCDQ96DY2 449 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 POP1Q99575 1024 aaKnown RBP13□□□□□ -0.33
CCDC57-216ENST00000582885 TMEM117Q9H0C3 514 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 ELAC1Q9H777 363 aaKnown RBP13□□□□□ -0.33
CCDC57-216ENST00000582885 CNTN3Q9P232 1028 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 SIK3Q9Y2K2 1263 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 GIT1Q9Y2X7 761 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 HES2Q9Y543 173 aa13□□□□□ -0.33
CCDC57-216ENST00000582885 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 ENPP3O14638 875 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 INPPL1O15357 1258 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 GCLMP48507 274 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 MYL7Q01449 175 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 KCNMA1Q12791 1236 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 SYCP1Q15431 976 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 ZBTB6Q15916 424 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 CBWD6Q4V339 395 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 EPC2Q52LR7 807 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 FIGNQ5HY92 759 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 CBWD3Q5JTY5 395 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 CBWD5Q5RIA9 395 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 SPECC1LQ69YQ0 1117 aa12.99□□□□□ -0.33
CCDC57-216ENST00000582885 RPUSD2Q8IZ73 545 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms