RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	HDAC7	Q8WUI4	952 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	GOLGA2P5	Q9HBQ8	144 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	ZDHHC7	Q9NXF8	308 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	LRWD1	Q9UFC0	647 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	FBXW11	Q9UKB1	542 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	NOL7	Q9UMY1	257 aa	Known RBP	12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	POLI	Q9UNA4	740 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	PCDHB6	Q9Y5E3	794 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	CFAP54	Q96N23	3096 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	DOCK6	Q96HP0	2047 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	VPS13A	Q96RL7	3174 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	DOCK8	Q8NF50	2099 aa		12.81	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114		E9PMD0	336 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114		I3L4J1	428 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	C8A	P07357	584 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	LAMP2	P13473	410 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	FSHR	P23945	695 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	CDC25A	P30304	524 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	FXR2	P51116	673 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	CLCNKB	P51801	687 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	PEX3	P56589	373 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	HMGN5	P82970	282 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	PTGDR	Q13258	359 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	ORC2	Q13416	577 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	ZRSR1	Q15695	479 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	DCAF4L1	Q3SXM0	396 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	PPM1L	Q5SGD2	360 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	LIN9	Q5TKA1	542 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	CEP120	Q8N960	986 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	GPR152	Q8TDT2	470 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	PIK3R5	Q8WYR1	880 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	RPP25	Q9BUL9	199 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	RHOBTB2	Q9BYZ6	727 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	NUMBL	Q9Y6R0	609 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	VWA8	A3KMH1	1905 aa		12.8	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114		K7ERI5	159 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	EIF5B	O60841	1220 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	HIP1R	O75146	1068 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	B3GAT3	O94766	335 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	SRF	P11831	508 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	HARS	P12081	509 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	OR1D2	P34982	312 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	BRCC3	P46736	316 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	TOB1	P50616	345 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	EFNA5	P52803	228 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	IL17A	Q16552	155 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	SPECC1	Q5M775	1068 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	GPR65	Q8IYL9	337 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	DTWD2	Q8NBA8	298 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	SLC7A14	Q8TBB6	771 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	KIFAP3	Q92845	792 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	KIF2C	Q99661	725 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	TBC1D17	Q9HA65	648 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	HCFC1R1	Q9NWW0	138 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	TRIP11	Q15643	1979 aa		12.79	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	PRR23A	A6NEV1	266 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	DCN	P07585	359 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	MUT	P22033	750 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	TKT	P29401	623 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	NBL1	P41271	181 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	NPTX2	P47972	431 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	TRAPPC10	P48553	1259 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	SOX4	Q06945	474 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	RAD51AP2	Q09MP3	1159 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	HTR4	Q13639	388 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	ANGPT1	Q15389	498 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	ZNF568	Q3ZCX4	644 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	PARM1	Q6UWI2	310 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	RSPO2	Q6UXX9	243 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	KCNK18	Q7Z418	384 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	CCDC105	Q8IYK2	499 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	C3orf58	Q8NDZ4	430 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	ITFG1	Q8TB96	612 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	PPP1R10	Q96QC0	940 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	RTP3	Q9BQQ7	232 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	RUSC1	Q9BVN2	902 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	TARS2	Q9BW92	718 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	CDT1	Q9H211	546 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	WNT16	Q9UBV4	365 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	CDY1	Q9Y6F8	540 aa		12.78	□□□□□ -0.36
CDK5RAP3-223	ENST00000582114	SMIM28	A0A1B0GU29	152 aa		12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	SFI1	A8K8P3	1242 aa		12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	PROB1	E7EW31	1015 aa		12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	ANHX	E9PGG2	379 aa		12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	PAPLN	O95428	1278 aa		12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	C1R	P00736	705 aa		12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	U2AF2	P26368	475 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	YARS	P54577	528 aa	Known RBP	12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	ELAVL2	Q12926	359 aa	Known RBP	12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	DMP1	Q13316	513 aa	Predicted RBP	12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	UPP1	Q16831	310 aa		12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	ERICH6B	Q5W0A0	696 aa		12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	KRT79	Q5XKE5	535 aa		12.77	□□□□□ -0.37
CDK5RAP3-223	ENST00000582114	MCTP1	Q6DN14	999 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms